RNA–Protein interactions for RNA: ENST00000471423.1

VPS72-204, Transcript of vacuolar protein sorting 72 homolog, humanhuman

TSL 2

Gene VPS72, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS72-204ENST00000471423 HIST1H2BOP23527 126 aa11.26□□□□□ -0.61
VPS72-204ENST00000471423 HIST1H2BBP33778 126 aa11.26□□□□□ -0.61
VPS72-204ENST00000471423 HIST1H2BDP58876 126 aa11.26□□□□□ -0.61
VPS72-204ENST00000471423 HIST1H2BCP62807 126 aa11.26□□□□□ -0.61
VPS72-204ENST00000471423 HIST2H2BEQ16778 126 aa11.26□□□□□ -0.61
VPS72-204ENST00000471423 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.26□□□□□ -0.61
VPS72-204ENST00000471423 Q8IZM0 81 aa11.26□□□□□ -0.61
VPS72-204ENST00000471423 HIST1H2BHQ93079 126 aa11.26□□□□□ -0.61
VPS72-204ENST00000471423 HIST1H2BNQ99877 126 aa11.26□□□□□ -0.61
VPS72-204ENST00000471423 HIST1H2BMQ99879 126 aa11.26□□□□□ -0.61
VPS72-204ENST00000471423 C6orf48Q9UBA6 75 aa11.26□□□□□ -0.61
VPS72-204ENST00000471423 VPS13BQ7Z7G8 4022 aa11.25□□□□□ -0.61
VPS72-204ENST00000471423 SPINK8P0C7L1 97 aa11.25□□□□□ -0.61
VPS72-204ENST00000471423 RPL18AQ02543 176 aaKnown RBP11.25□□□□□ -0.61
VPS72-204ENST00000471423 GAGE2BQ13066 116 aa11.25□□□□□ -0.61
VPS72-204ENST00000471423 H3BRM9 83 aa11.24□□□□□ -0.61
VPS72-204ENST00000471423 ZNF22P17026 224 aaPredicted RBP11.24□□□□□ -0.61
VPS72-204ENST00000471423 PTTG1IPP53801 180 aa11.24□□□□□ -0.61
VPS72-204ENST00000471423 C6orf226Q5I0X4 101 aa11.24□□□□□ -0.61
VPS72-204ENST00000471423 LINC00474Q9P2X8 69 aa11.24□□□□□ -0.61
VPS72-204ENST00000471423 CHTOPQ9Y3Y2 248 aaKnown RBP11.24□□□□□ -0.61
VPS72-204ENST00000471423 TRBV30A0A0K0K1B3 111 aa11.23□□□□□ -0.61
VPS72-204ENST00000471423 LEPROTL1O95214 131 aa11.23□□□□□ -0.61
VPS72-204ENST00000471423 CKS1BP61024 79 aa11.23□□□□□ -0.61
VPS72-204ENST00000471423 TRAV12-1A0A0B4J245 112 aa11.22□□□□□ -0.61
VPS72-204ENST00000471423 C11orf86A6NJI1 115 aa11.22□□□□□ -0.61
VPS72-204ENST00000471423 STPG4Q8N801 248 aa11.22□□□□□ -0.61
VPS72-204ENST00000471423 PLAC8Q9NZF1 115 aa11.22□□□□□ -0.61
VPS72-204ENST00000471423 COX7B2Q8TF08 81 aa11.21□□□□□ -0.61
VPS72-204ENST00000471423 H0Y8G0 127 aa11.2□□□□□ -0.62
VPS72-204ENST00000471423 FABP4P15090 132 aa11.2□□□□□ -0.62
VPS72-204ENST00000471423 C9orf116Q5BN46 136 aaPredicted RBP11.2□□□□□ -0.62
VPS72-204ENST00000471423 TLX1NBP0CAT3 122 aa11.19□□□□□ -0.62
VPS72-204ENST00000471423 CXCL5P42830 114 aa11.19□□□□□ -0.62
VPS72-204ENST00000471423 TMEM170BQ5T4T1 132 aa11.19□□□□□ -0.62
VPS72-204ENST00000471423 Q6ZRP5 223 aa11.19□□□□□ -0.62
VPS72-204ENST00000471423 HSPB8Q9UJY1 196 aa11.19□□□□□ -0.62
VPS72-204ENST00000471423 IGLV5-39A0A0G2JS06 123 aa11.18□□□□□ -0.62
VPS72-204ENST00000471423 F8VRH5 84 aa11.18□□□□□ -0.62
VPS72-204ENST00000471423 PLA2G1BP04054 148 aaKnown RBP11.18□□□□□ -0.62
VPS72-204ENST00000471423 ODF1Q14990 250 aa11.17□□□□□ -0.62
VPS72-204ENST00000471423 GAGE2EQ4V326 116 aa11.17□□□□□ -0.62
VPS72-204ENST00000471423 GAGE2DQ9UEU5 116 aa11.17□□□□□ -0.62
VPS72-204ENST00000471423 NDUFC2-KCTD14E9PQ53 114 aa11.16□□□□□ -0.62
VPS72-204ENST00000471423 RPL37AP61513 92 aaKnown RBP11.15□□□□□ -0.62
VPS72-204ENST00000471423 SRRM2Q9UQ35 2752 aaKnown RBP11.15□□□□□ -0.63
VPS72-204ENST00000471423 A0A1W2PNN7 141 aa11.14□□□□□ -0.63
VPS72-204ENST00000471423 KRTAP10-4P60372 401 aaPredicted RBP11.14□□□□□ -0.63
VPS72-204ENST00000471423 INAFM2P0DMQ5 153 aa11.13□□□□□ -0.63
VPS72-204ENST00000471423 C7orf33Q8WU49 177 aa11.13□□□□□ -0.63
VPS72-204ENST00000471423 TMEM223A0PJW6 202 aa11.12□□□□□ -0.63
VPS72-204ENST00000471423 COA6Q5JTJ3 125 aaKnown RBP11.11□□□□□ -0.63
VPS72-204ENST00000471423 MAP1LC3CQ9BXW4 147 aa11.11□□□□□ -0.63
VPS72-204ENST00000471423 FAM168BA1KXE4 195 aa11.1□□□□□ -0.63
VPS72-204ENST00000471423 C9orf129Q5T035 196 aaKnown RBP11.1□□□□□ -0.63
VPS72-204ENST00000471423 PMCHL2Q9BQD1 86 aa11.1□□□□□ -0.63
VPS72-204ENST00000471423 PLNP26678 52 aa11.09□□□□□ -0.63
VPS72-204ENST00000471423 DPM2O94777 84 aa11.08□□□□□ -0.64
VPS72-204ENST00000471423 FAM19A5Q7Z5A7 132 aaPredicted RBP11.08□□□□□ -0.64
VPS72-204ENST00000471423 XAGE1AQ9HD64 81 aa11.08□□□□□ -0.64
VPS72-204ENST00000471423 PKHD1L1Q86WI1 4243 aa11.08□□□□□ -0.64
VPS72-204ENST00000471423 MYCBP2O75592 4640 aa11.07□□□□□ -0.64
VPS72-204ENST00000471423 SYS1-DBNDD2H3BUS1 97 aa11.06□□□□□ -0.64
VPS72-204ENST00000471423 IGKCP01834 107 aa11.06□□□□□ -0.64
VPS72-204ENST00000471423 PHF5AQ7RTV0 110 aaKnown RBP11.06□□□□□ -0.64
VPS72-204ENST00000471423 KRTAP7-1Q8IUC3 87 aa11.06□□□□□ -0.64
VPS72-204ENST00000471423 ZNF625Q96I27 306 aaPredicted RBP11.06□□□□□ -0.64
VPS72-204ENST00000471423 PFN2P35080 140 aa11.04□□□□□ -0.64
VPS72-204ENST00000471423 PRR3P79522 188 aaKnown RBP11.04□□□□□ -0.64
VPS72-204ENST00000471423 SFTA2Q6UW10 78 aa11.04□□□□□ -0.64
VPS72-204ENST00000471423 ERG28Q9UKR5 140 aa11.04□□□□□ -0.64
VPS72-204ENST00000471423 FLG2Q5D862 2391 aaPredicted RBP11.03□□□□□ -0.64
VPS72-204ENST00000471423 M0QXV9 152 aa11.03□□□□□ -0.64
VPS72-204ENST00000471423 HNRNPA3P51991 378 aaKnown RBP11.03□□□□□ -0.64
VPS72-204ENST00000471423 SERTAD4-AS1Q5TG53 156 aa11.02□□□□□ -0.65
VPS72-204ENST00000471423 C3orf79P0CE67 100 aa11.01□□□□□ -0.65
VPS72-204ENST00000471423 TSPEAR-AS2P59090 65 aa11.01□□□□□ -0.65
VPS72-204ENST00000471423 HERVK_113P61574 105 aa11.01□□□□□ -0.65
VPS72-204ENST00000471423 PET117Q6UWS5 81 aa11.01□□□□□ -0.65
VPS72-204ENST00000471423 KRTDAPP60985 99 aa11□□□□□ -0.65
VPS72-204ENST00000471423 LINC01545Q5VT33 79 aa11□□□□□ -0.65
VPS72-204ENST00000471423 LEPROTO15243 131 aa10.99□□□□□ -0.65
VPS72-204ENST00000471423 COX17Q14061 63 aa10.99□□□□□ -0.65
VPS72-204ENST00000471423 PLEKHB2Q96CS7 222 aa10.99□□□□□ -0.65
VPS72-204ENST00000471423 NDUFA12Q9UI09 145 aa10.99□□□□□ -0.65
VPS72-204ENST00000471423 FAT3Q8TDW7 4589 aa10.97□□□□□ -0.65
VPS72-204ENST00000471423 J3QQQ9 107 aa10.97□□□□□ -0.65
VPS72-204ENST00000471423 KRTAP11-1Q8IUC1 163 aa10.97□□□□□ -0.65
VPS72-204ENST00000471423 SND1-IT1Q9HBX3 110 aa10.97□□□□□ -0.65
VPS72-204ENST00000471423 PSORS1C2Q9UIG4 136 aa10.97□□□□□ -0.65
VPS72-204ENST00000471423 LRP1Q07954 4544 aaKnown RBP10.97□□□□□ -0.65
VPS72-204ENST00000471423 A0A0U1RRA0 63 aa10.96□□□□□ -0.65
VPS72-204ENST00000471423 MYMXA0A1B0GTQ4 84 aa10.96□□□□□ -0.65
VPS72-204ENST00000471423 LINC00158P58513 81 aa10.96□□□□□ -0.65
VPS72-204ENST00000471423 HERV-K104P63124 156 aa10.96□□□□□ -0.65
VPS72-204ENST00000471423 UBE2BP63146 152 aa10.96□□□□□ -0.65
VPS72-204ENST00000471423 MEIG1Q5JSS6 88 aa10.96□□□□□ -0.65
VPS72-204ENST00000471423 HIST3H2BBQ8N257 126 aa10.96□□□□□ -0.65
VPS72-204ENST00000471423 C22orf24Q9Y442 160 aa10.96□□□□□ -0.65
VPS72-204ENST00000471423 LGALS3P17931 250 aaKnown RBP10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms