RNA–Protein interactions for RNA: ENST00000471246.1

UBXN4-207, Transcript of UBX domain protein 4, humanhuman

TSL 3

Gene UBXN4, Length 395 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-207ENST00000471246 H3F3AP84243 136 aa-0.38□□□□□ -2.47
UBXN4-207ENST00000471246 PRCDQ00LT1 54 aa-0.38□□□□□ -2.47
UBXN4-207ENST00000471246 KRR1Q13601 381 aaKnown RBP-0.38□□□□□ -2.47
UBXN4-207ENST00000471246 FXYD3Q14802 87 aa-0.38□□□□□ -2.47
UBXN4-207ENST00000471246 PLGLAQ15195 96 aa-0.38□□□□□ -2.47
UBXN4-207ENST00000471246 RHOHQ15669 191 aa-0.38□□□□□ -2.47
UBXN4-207ENST00000471246 IAH1Q2TAA2 248 aaPredicted RBP-0.38□□□□□ -2.47
UBXN4-207ENST00000471246 CCSMST1Q4G0I0 132 aa-0.38□□□□□ -2.47
UBXN4-207ENST00000471246 C9orf153Q5TBE3 101 aa-0.38□□□□□ -2.47
UBXN4-207ENST00000471246 ALKAL2Q6UX46 152 aa-0.38□□□□□ -2.47
UBXN4-207ENST00000471246 Q6ZUT4 128 aa-0.38□□□□□ -2.47
UBXN4-207ENST00000471246 LINC00269Q8N2A0 174 aa-0.38□□□□□ -2.47
UBXN4-207ENST00000471246 C10orf111Q8N326 155 aa-0.38□□□□□ -2.47
UBXN4-207ENST00000471246 FAM24BQ8N5W8 94 aa-0.38□□□□□ -2.47
UBXN4-207ENST00000471246 FAM213BQ8TBF2 198 aa-0.38□□□□□ -2.47
UBXN4-207ENST00000471246 DYDC1Q8WWB3 177 aa-0.38□□□□□ -2.47
UBXN4-207ENST00000471246 RAB37Q96AX2 223 aa-0.38□□□□□ -2.47
UBXN4-207ENST00000471246 GAFA1Q96PS6 74 aa-0.38□□□□□ -2.47
UBXN4-207ENST00000471246 SLC25A21Q9BQT8 299 aaPredicted RBP-0.38□□□□□ -2.47
UBXN4-207ENST00000471246 GINS3Q9BRX5 216 aa-0.38□□□□□ -2.47
UBXN4-207ENST00000471246 FXYD6Q9H0Q3 95 aa-0.38□□□□□ -2.47
UBXN4-207ENST00000471246 RNASE7Q9H1E1 156 aaKnown RBP-0.38□□□□□ -2.47
UBXN4-207ENST00000471246 SLC35B3Q9H1N7 401 aa-0.38□□□□□ -2.47
UBXN4-207ENST00000471246 PRO1933Q9H354 126 aa-0.38□□□□□ -2.47
UBXN4-207ENST00000471246 COA4Q9NYJ1 87 aa-0.38□□□□□ -2.47
UBXN4-207ENST00000471246 MRPL35Q9NZE8 188 aaKnown RBP-0.38□□□□□ -2.47
UBXN4-207ENST00000471246 VPS29Q9UBQ0 182 aa-0.38□□□□□ -2.47
UBXN4-207ENST00000471246 LINC00312Q9Y6C7 94 aa-0.38□□□□□ -2.47
UBXN4-207ENST00000471246 TRAV4A0A0B4J268 109 aa-0.39□□□□□ -2.47
UBXN4-207ENST00000471246 C17orf112F2Z3M2 114 aa-0.39□□□□□ -2.47
UBXN4-207ENST00000471246 PGRMC1O00264 195 aaKnown RBP-0.39□□□□□ -2.47
UBXN4-207ENST00000471246 CST8O60676 142 aa-0.39□□□□□ -2.47
UBXN4-207ENST00000471246 S100PP25815 95 aa-0.39□□□□□ -2.47
UBXN4-207ENST00000471246 SULT1A1P50225 295 aa-0.39□□□□□ -2.47
UBXN4-207ENST00000471246 NPC2P61916 151 aa-0.39□□□□□ -2.47
UBXN4-207ENST00000471246 TMEM97Q5BJF2 176 aa-0.39□□□□□ -2.47
UBXN4-207ENST00000471246 CCDC122Q5T0U0 273 aa-0.39□□□□□ -2.47
UBXN4-207ENST00000471246 AKR1C8PQ5T2L2 129 aa-0.39□□□□□ -2.47
UBXN4-207ENST00000471246 LINC01590Q5TEZ4 76 aa-0.39□□□□□ -2.47
UBXN4-207ENST00000471246 C3orf33Q6P1S2 294 aa-0.39□□□□□ -2.47
UBXN4-207ENST00000471246 OR5AS1Q8N127 324 aa-0.39□□□□□ -2.47
UBXN4-207ENST00000471246 LRRC18Q8N456 261 aa-0.39□□□□□ -2.47
UBXN4-207ENST00000471246 SREK1IP1Q8N9Q2 155 aaPredicted RBP-0.39□□□□□ -2.47
UBXN4-207ENST00000471246 TMEM203Q969S6 136 aa-0.39□□□□□ -2.47
UBXN4-207ENST00000471246 SDF2Q99470 211 aa-0.39□□□□□ -2.47
UBXN4-207ENST00000471246 LINC00472Q9H8W2 130 aa-0.39□□□□□ -2.47
UBXN4-207ENST00000471246 NPVFQ9HCQ7 196 aa-0.39□□□□□ -2.47
UBXN4-207ENST00000471246 RPRMQ9NS64 109 aa-0.39□□□□□ -2.47
UBXN4-207ENST00000471246 FKBP11Q9NYL4 201 aa-0.39□□□□□ -2.47
UBXN4-207ENST00000471246 MRPL36Q9P0J6 103 aaKnown RBP-0.39□□□□□ -2.47
UBXN4-207ENST00000471246 hDV103S1A0JD37 113 aa-0.4□□□□□ -2.47
UBXN4-207ENST00000471246 FAM24AA6NFZ4 105 aa-0.4□□□□□ -2.47
UBXN4-207ENST00000471246 HCG22E2RYF7 251 aa-0.4□□□□□ -2.47
UBXN4-207ENST00000471246 H3BQV1 296 aa-0.4□□□□□ -2.47
UBXN4-207ENST00000471246 M0QX08 132 aa-0.4□□□□□ -2.47
UBXN4-207ENST00000471246 NDUFA1O15239 70 aa-0.4□□□□□ -2.47
UBXN4-207ENST00000471246 SERPINA6P08185 405 aa-0.4□□□□□ -2.47
UBXN4-207ENST00000471246 PIPP12273 146 aaPredicted RBP-0.4□□□□□ -2.47
UBXN4-207ENST00000471246 HSD11B1P28845 292 aa-0.4□□□□□ -2.47
UBXN4-207ENST00000471246 RAB5CP51148 216 aa-0.4□□□□□ -2.47
UBXN4-207ENST00000471246 EDDM3BP56851 147 aa-0.4□□□□□ -2.47
UBXN4-207ENST00000471246 SNCBQ16143 134 aa-0.4□□□□□ -2.47
UBXN4-207ENST00000471246 LYRM7Q5U5X0 104 aa-0.4□□□□□ -2.47
UBXN4-207ENST00000471246 OR2T2Q6IF00 324 aa-0.4□□□□□ -2.47
UBXN4-207ENST00000471246 PATE2Q6UY27 113 aa-0.4□□□□□ -2.47
UBXN4-207ENST00000471246 CASC2Q6XLA1 102 aa-0.4□□□□□ -2.47
UBXN4-207ENST00000471246 AKAP14Q86UN6 197 aa-0.4□□□□□ -2.47
UBXN4-207ENST00000471246 SNX29P2Q8IUI4 249 aa-0.4□□□□□ -2.47
UBXN4-207ENST00000471246 GRPEL2Q8TAA5 225 aa-0.4□□□□□ -2.47
UBXN4-207ENST00000471246 BORCS7Q96B45 105 aa-0.4□□□□□ -2.47
UBXN4-207ENST00000471246 CIB3Q96Q77 187 aaPredicted RBP-0.4□□□□□ -2.47
UBXN4-207ENST00000471246 PHB2Q99623 299 aa-0.4□□□□□ -2.47
UBXN4-207ENST00000471246 PCBD2Q9H0N5 130 aa-0.4□□□□□ -2.47
UBXN4-207ENST00000471246 LAMTOR3Q9UHA4 124 aa-0.4□□□□□ -2.47
UBXN4-207ENST00000471246 GUCA1BQ9UMX6 200 aa-0.4□□□□□ -2.47
UBXN4-207ENST00000471246 A0A087WUJ7 227 aa-0.41□□□□□ -2.48
UBXN4-207ENST00000471246 TMEM210A6NLX4 147 aa-0.41□□□□□ -2.48
UBXN4-207ENST00000471246 F2Z2F3 143 aa-0.41□□□□□ -2.48
UBXN4-207ENST00000471246 H7BZZ5 65 aa-0.41□□□□□ -2.48
UBXN4-207ENST00000471246 M0R2Z0 102 aa-0.41□□□□□ -2.48
UBXN4-207ENST00000471246 KPNA4O00629 521 aaPredicted RBP-0.41□□□□□ -2.48
UBXN4-207ENST00000471246 MFSD11O43934 449 aa-0.41□□□□□ -2.48
UBXN4-207ENST00000471246 SIX6O95475 246 aa-0.41□□□□□ -2.48
UBXN4-207ENST00000471246 LINC00694P0DN24 101 aa-0.41□□□□□ -2.48
UBXN4-207ENST00000471246 ACYP2P14621 99 aa-0.41□□□□□ -2.48
UBXN4-207ENST00000471246 NFYBP25208 207 aa-0.41□□□□□ -2.48
UBXN4-207ENST00000471246 SPRR1AP35321 89 aa-0.41□□□□□ -2.48
UBXN4-207ENST00000471246 RPS27P42677 84 aaKnown RBP-0.41□□□□□ -2.48
UBXN4-207ENST00000471246 GUCA1AP43080 201 aaPredicted RBP-0.41□□□□□ -2.48
UBXN4-207ENST00000471246 POLR2HP52434 150 aaKnown RBP-0.41□□□□□ -2.48
UBXN4-207ENST00000471246 RANP62826 216 aaKnown RBP-0.41□□□□□ -2.48
UBXN4-207ENST00000471246 MRPS10P82664 201 aaKnown RBP-0.41□□□□□ -2.48
UBXN4-207ENST00000471246 MYL5Q02045 173 aa-0.41□□□□□ -2.48
UBXN4-207ENST00000471246 EDDM3AQ14507 147 aa-0.41□□□□□ -2.48
UBXN4-207ENST00000471246 TMED2Q15363 201 aa-0.41□□□□□ -2.48
UBXN4-207ENST00000471246 SMIM21Q3B7S5 101 aa-0.41□□□□□ -2.48
UBXN4-207ENST00000471246 NMSQ5H8A3 153 aa-0.41□□□□□ -2.48
UBXN4-207ENST00000471246 ARPINQ7Z6K5 226 aa-0.41□□□□□ -2.48
UBXN4-207ENST00000471246 S100A7AQ86SG5 101 aa-0.41□□□□□ -2.48
UBXN4-207ENST00000471246 OR5AK2Q8NH90 309 aa-0.41□□□□□ -2.48
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms