RNA–Protein interactions for RNA: ENST00000470278.5

CDC42SE1-203, Transcript of CDC42 small effector 1, humanhuman

TSL 5

Gene CDC42SE1, Length 939 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-203ENST00000470278 NDUFA1O15239 70 aa9.6□□□□□ -0.87
CDC42SE1-203ENST00000470278 RNF151Q2KHN1 245 aa9.6□□□□□ -0.87
CDC42SE1-203ENST00000470278 IGLV5-39A0A0G2JS06 123 aa9.59□□□□□ -0.87
CDC42SE1-203ENST00000470278 H0Y8G0 127 aa9.59□□□□□ -0.87
CDC42SE1-203ENST00000470278 PRSS2P07478 247 aa9.59□□□□□ -0.87
CDC42SE1-203ENST00000470278 SPINK8P0C7L1 97 aa9.59□□□□□ -0.87
CDC42SE1-203ENST00000470278 PLNP26678 52 aa9.59□□□□□ -0.87
CDC42SE1-203ENST00000470278 CXCL5P42830 114 aa9.59□□□□□ -0.87
CDC42SE1-203ENST00000470278 CIRBPQ14011 172 aaKnown RBP9.58□□□□□ -0.88
CDC42SE1-203ENST00000470278 TMEM170BQ5T4T1 132 aa9.58□□□□□ -0.88
CDC42SE1-203ENST00000470278 TRBV30A0A0K0K1B3 111 aa9.57□□□□□ -0.88
CDC42SE1-203ENST00000470278 SYS1-DBNDD2H3BUS1 97 aa9.57□□□□□ -0.88
CDC42SE1-203ENST00000470278 COX7B2Q8TF08 81 aa9.57□□□□□ -0.88
CDC42SE1-203ENST00000470278 FAM30AQ9NZY2 134 aa9.57□□□□□ -0.88
CDC42SE1-203ENST00000470278 TOMM7Q9P0U1 55 aa9.57□□□□□ -0.88
CDC42SE1-203ENST00000470278 TMEM223A0PJW6 202 aa9.56□□□□□ -0.88
CDC42SE1-203ENST00000470278 S100A6P06703 90 aa9.56□□□□□ -0.88
CDC42SE1-203ENST00000470278 CKS1BP61024 79 aa9.56□□□□□ -0.88
CDC42SE1-203ENST00000470278 C6orf226Q5I0X4 101 aa9.56□□□□□ -0.88
CDC42SE1-203ENST00000470278 C6orf48Q9UBA6 75 aa9.56□□□□□ -0.88
CDC42SE1-203ENST00000470278 DPM2O94777 84 aa9.55□□□□□ -0.88
CDC42SE1-203ENST00000470278 XGP55808 180 aa9.55□□□□□ -0.88
CDC42SE1-203ENST00000470278 C10orf25Q5T742 122 aa9.55□□□□□ -0.88
CDC42SE1-203ENST00000470278 PET117Q6UWS5 81 aa9.55□□□□□ -0.88
CDC42SE1-203ENST00000470278 C2orf82Q6UX34 121 aa9.55□□□□□ -0.88
CDC42SE1-203ENST00000470278 UNQ6190/PRO20217Q6UXQ8 127 aa9.55□□□□□ -0.88
CDC42SE1-203ENST00000470278 HIST3H2BBQ8N257 126 aa9.55□□□□□ -0.88
CDC42SE1-203ENST00000470278 LOC107984640A0A0U1RRK4 108 aa9.54□□□□□ -0.88
CDC42SE1-203ENST00000470278 TLX1NBP0CAT3 122 aa9.54□□□□□ -0.88
CDC42SE1-203ENST00000470278 LINC01545Q5VT33 79 aa9.54□□□□□ -0.88
CDC42SE1-203ENST00000470278 SPACA4Q8TDM5 124 aa9.54□□□□□ -0.88
CDC42SE1-203ENST00000470278 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.54□□□□□ -0.88
CDC42SE1-203ENST00000470278 IGKCP01834 107 aa9.53□□□□□ -0.88
CDC42SE1-203ENST00000470278 C3orf79P0CE67 100 aa9.53□□□□□ -0.88
CDC42SE1-203ENST00000470278 SFTA2Q6UW10 78 aa9.53□□□□□ -0.88
CDC42SE1-203ENST00000470278 HIST1H2BLQ99880 126 aa9.53□□□□□ -0.88
CDC42SE1-203ENST00000470278 LINC00474Q9P2X8 69 aa9.53□□□□□ -0.88
CDC42SE1-203ENST00000470278 A0A096LNI7 61 aa9.52□□□□□ -0.89
CDC42SE1-203ENST00000470278 PANO1I0J062 215 aa9.52□□□□□ -0.89
CDC42SE1-203ENST00000470278 S100A2P29034 98 aa9.52□□□□□ -0.89
CDC42SE1-203ENST00000470278 SCXQ7RTU7 201 aa9.52□□□□□ -0.89
CDC42SE1-203ENST00000470278 PMCHL2Q9BQD1 86 aa9.52□□□□□ -0.89
CDC42SE1-203ENST00000470278 C5orf52A6NGY3 159 aa9.51□□□□□ -0.89
CDC42SE1-203ENST00000470278 PTTG1IPP53801 180 aa9.51□□□□□ -0.89
CDC42SE1-203ENST00000470278 NDUFC2-KCTD14E9PQ53 114 aa9.5□□□□□ -0.89
CDC42SE1-203ENST00000470278 CHTF8P0CG12 524 aa9.5□□□□□ -0.89
CDC42SE1-203ENST00000470278 KRTDAPP60985 99 aa9.5□□□□□ -0.89
CDC42SE1-203ENST00000470278 CIRBP-AS1Q8TBR5 109 aa9.5□□□□□ -0.89
CDC42SE1-203ENST00000470278 IGKV2-24A0A0C4DH68 120 aa9.49□□□□□ -0.89
CDC42SE1-203ENST00000470278 SNRPEP62304 92 aaKnown RBP9.49□□□□□ -0.89
CDC42SE1-203ENST00000470278 RPL18AQ02543 176 aaKnown RBP9.49□□□□□ -0.89
CDC42SE1-203ENST00000470278 Q6ZRP5 223 aa9.49□□□□□ -0.89
CDC42SE1-203ENST00000470278 C20orf202A1L168 122 aa9.48□□□□□ -0.89
CDC42SE1-203ENST00000470278 AKR1D1P51857 326 aa9.48□□□□□ -0.89
CDC42SE1-203ENST00000470278 HERVK_113P61574 105 aa9.48□□□□□ -0.89
CDC42SE1-203ENST00000470278 HAMPP81172 84 aa9.48□□□□□ -0.89
CDC42SE1-203ENST00000470278 ZNF625Q96I27 306 aaPredicted RBP9.48□□□□□ -0.89
CDC42SE1-203ENST00000470278 PLAC8Q9NZF1 115 aa9.48□□□□□ -0.89
CDC42SE1-203ENST00000470278 EPM2AB3EWF7 344 aa9.47□□□□□ -0.89
CDC42SE1-203ENST00000470278 C9orf116Q5BN46 136 aaPredicted RBP9.47□□□□□ -0.89
CDC42SE1-203ENST00000470278 A0A087WYN8 130 aa9.46□□□□□ -0.9
CDC42SE1-203ENST00000470278 LEPROTO15243 131 aa9.46□□□□□ -0.9
CDC42SE1-203ENST00000470278 GAGE2BQ13066 116 aa9.46□□□□□ -0.9
CDC42SE1-203ENST00000470278 MAJINQ3KP22 176 aa9.46□□□□□ -0.9
CDC42SE1-203ENST00000470278 E9PLD3 99 aa9.45□□□□□ -0.9
CDC42SE1-203ENST00000470278 Q5VSD8 79 aa9.45□□□□□ -0.9
CDC42SE1-203ENST00000470278 PLEKHB2Q96CS7 222 aa9.45□□□□□ -0.9
CDC42SE1-203ENST00000470278 COX17Q14061 63 aa9.44□□□□□ -0.9
CDC42SE1-203ENST00000470278 STPG4Q8N801 248 aa9.44□□□□□ -0.9
CDC42SE1-203ENST00000470278 INAFM2P0DMQ5 153 aa9.43□□□□□ -0.9
CDC42SE1-203ENST00000470278 TSPEAR-AS2P59090 65 aa9.43□□□□□ -0.9
CDC42SE1-203ENST00000470278 HERV-K104P63124 156 aa9.43□□□□□ -0.9
CDC42SE1-203ENST00000470278 ERG28Q9UKR5 140 aa9.43□□□□□ -0.9
CDC42SE1-203ENST00000470278 J3QQQ9 107 aa9.42□□□□□ -0.9
CDC42SE1-203ENST00000470278 NMUP48645 174 aa9.42□□□□□ -0.9
CDC42SE1-203ENST00000470278 GAGE2EQ4V326 116 aa9.42□□□□□ -0.9
CDC42SE1-203ENST00000470278 DPH3Q96FX2 82 aa9.42□□□□□ -0.9
CDC42SE1-203ENST00000470278 GAGE2DQ9UEU5 116 aa9.42□□□□□ -0.9
CDC42SE1-203ENST00000470278 NDUFA12Q9UI09 145 aa9.42□□□□□ -0.9
CDC42SE1-203ENST00000470278 C9orf129Q5T035 196 aaKnown RBP9.41□□□□□ -0.9
CDC42SE1-203ENST00000470278 MYMXA0A1B0GTQ4 84 aa9.4□□□□□ -0.9
CDC42SE1-203ENST00000470278 LGALS3P17931 250 aaKnown RBP9.4□□□□□ -0.9
CDC42SE1-203ENST00000470278 LRP1Q07954 4544 aaKnown RBP9.4□□□□□ -0.9
CDC42SE1-203ENST00000470278 A0A1W2PNN7 141 aa9.39□□□□□ -0.91
CDC42SE1-203ENST00000470278 SMR3BP02814 79 aaPredicted RBP9.39□□□□□ -0.91
CDC42SE1-203ENST00000470278 LINC00528Q8N1L1 170 aa9.39□□□□□ -0.91
CDC42SE1-203ENST00000470278 LINC00587B1AMM8 73 aa9.38□□□□□ -0.91
CDC42SE1-203ENST00000470278 PFN2P35080 140 aa9.38□□□□□ -0.91
CDC42SE1-203ENST00000470278 XAGE1AQ9HD64 81 aa9.38□□□□□ -0.91
CDC42SE1-203ENST00000470278 ATOH7Q8N100 152 aa9.37□□□□□ -0.91
CDC42SE1-203ENST00000470278 HMCN2Q8NDA2 5059 aa9.36□□□□□ -0.91
CDC42SE1-203ENST00000470278 IGKV2D-26A0A0A0MRZ7 120 aa9.36□□□□□ -0.91
CDC42SE1-203ENST00000470278 FAM168BA1KXE4 195 aa9.36□□□□□ -0.91
CDC42SE1-203ENST00000470278 FAM229AH3BQW9 127 aa9.36□□□□□ -0.91
CDC42SE1-203ENST00000470278 KRTAP7-1Q8IUC3 87 aa9.36□□□□□ -0.91
CDC42SE1-203ENST00000470278 PLA2G2DQ9UNK4 145 aa9.36□□□□□ -0.91
CDC42SE1-203ENST00000470278 TMA7Q9Y2S6 64 aaKnown RBP9.36□□□□□ -0.91
CDC42SE1-203ENST00000470278 MEIG1Q5JSS6 88 aa9.35□□□□□ -0.91
CDC42SE1-203ENST00000470278 FAM19A5Q7Z5A7 132 aaPredicted RBP9.35□□□□□ -0.91
CDC42SE1-203ENST00000470278 C7orf33Q8WU49 177 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms