RNA–Protein interactions for RNA: ENST00000469778.1

SPTLC1-204, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 2

Gene SPTLC1, Length 490 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-204ENST00000469778 H0Y8G0 127 aa8.13□□□□□ -1.11
SPTLC1-204ENST00000469778 IGKCP01834 107 aa8.13□□□□□ -1.11
SPTLC1-204ENST00000469778 SPINK8P0C7L1 97 aa8.13□□□□□ -1.11
SPTLC1-204ENST00000469778 TLX1NBP0CAT3 122 aa8.13□□□□□ -1.11
SPTLC1-204ENST00000469778 HIST3H2BBQ8N257 126 aa8.13□□□□□ -1.11
SPTLC1-204ENST00000469778 BIRC6Q9NR09 4857 aa8.12□□□□□ -1.11
SPTLC1-204ENST00000469778 HERVK_113P61574 105 aa8.12□□□□□ -1.11
SPTLC1-204ENST00000469778 LINC01545Q5VT33 79 aa8.12□□□□□ -1.11
SPTLC1-204ENST00000469778 UNQ6190/PRO20217Q6UXQ8 127 aa8.12□□□□□ -1.11
SPTLC1-204ENST00000469778 C5orf52A6NGY3 159 aa8.11□□□□□ -1.11
SPTLC1-204ENST00000469778 C3orf79P0CE67 100 aa8.11□□□□□ -1.11
SPTLC1-204ENST00000469778 CIRBPQ14011 172 aaKnown RBP8.11□□□□□ -1.11
SPTLC1-204ENST00000469778 KRTDAPP60985 99 aa8.1□□□□□ -1.11
SPTLC1-204ENST00000469778 LINC01620Q4KN68 170 aa8.1□□□□□ -1.11
SPTLC1-204ENST00000469778 HIST1H2BLQ99880 126 aa8.1□□□□□ -1.11
SPTLC1-204ENST00000469778 C6orf48Q9UBA6 75 aa8.1□□□□□ -1.11
SPTLC1-204ENST00000469778 LINC00587B1AMM8 73 aa8.09□□□□□ -1.11
SPTLC1-204ENST00000469778 SNRPEP62304 92 aaKnown RBP8.09□□□□□ -1.11
SPTLC1-204ENST00000469778 C10orf25Q5T742 122 aa8.09□□□□□ -1.11
SPTLC1-204ENST00000469778 C2orf82Q6UX34 121 aa8.09□□□□□ -1.11
SPTLC1-204ENST00000469778 PLEKHB2Q96CS7 222 aa8.09□□□□□ -1.11
SPTLC1-204ENST00000469778 DPH3Q96FX2 82 aa8.09□□□□□ -1.11
SPTLC1-204ENST00000469778 NDUFC2-KCTD14E9PQ53 114 aa8.08□□□□□ -1.12
SPTLC1-204ENST00000469778 COX17Q14061 63 aa8.08□□□□□ -1.12
SPTLC1-204ENST00000469778 PTTG1IPP53801 180 aa8.07□□□□□ -1.12
SPTLC1-204ENST00000469778 XGP55808 180 aa8.07□□□□□ -1.12
SPTLC1-204ENST00000469778 HERV-K104P63124 156 aa8.07□□□□□ -1.12
SPTLC1-204ENST00000469778 SPACA4Q8TDM5 124 aa8.07□□□□□ -1.12
SPTLC1-204ENST00000469778 FAM30AQ9NZY2 134 aa8.07□□□□□ -1.12
SPTLC1-204ENST00000469778 DYNC1H1Q14204 4646 aaKnown RBP8.06□□□□□ -1.12
SPTLC1-204ENST00000469778 LEPROTO15243 131 aa8.06□□□□□ -1.12
SPTLC1-204ENST00000469778 NMUP48645 174 aa8.06□□□□□ -1.12
SPTLC1-204ENST00000469778 PMCHL2Q9BQD1 86 aa8.06□□□□□ -1.12
SPTLC1-204ENST00000469778 DNAH5Q8TE73 4624 aa8.06□□□□□ -1.12
SPTLC1-204ENST00000469778 MYMXA0A1B0GTQ4 84 aa8.05□□□□□ -1.12
SPTLC1-204ENST00000469778 ZNF625Q96I27 306 aaPredicted RBP8.05□□□□□ -1.12
SPTLC1-204ENST00000469778 PLAC8Q9NZF1 115 aa8.05□□□□□ -1.12
SPTLC1-204ENST00000469778 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.05□□□□□ -1.12
SPTLC1-204ENST00000469778 A0A096LNI7 61 aa8.04□□□□□ -1.12
SPTLC1-204ENST00000469778 E9PLD3 99 aa8.04□□□□□ -1.12
SPTLC1-204ENST00000469778 RPL18AQ02543 176 aaKnown RBP8.04□□□□□ -1.12
SPTLC1-204ENST00000469778 GAGE2BQ13066 116 aa8.04□□□□□ -1.12
SPTLC1-204ENST00000469778 MAJINQ3KP22 176 aa8.04□□□□□ -1.12
SPTLC1-204ENST00000469778 Q6ZRP5 223 aa8.04□□□□□ -1.12
SPTLC1-204ENST00000469778 SCXQ7RTU7 201 aa8.04□□□□□ -1.12
SPTLC1-204ENST00000469778 CIRBP-AS1Q8TBR5 109 aa8.04□□□□□ -1.12
SPTLC1-204ENST00000469778 LRP1BQ9NZR2 4599 aa8.04□□□□□ -1.12
SPTLC1-204ENST00000469778 IGKV2-24A0A0C4DH68 120 aa8.03□□□□□ -1.12
SPTLC1-204ENST00000469778 EPM2AB3EWF7 344 aa8.03□□□□□ -1.12
SPTLC1-204ENST00000469778 J3QQQ9 107 aa8.03□□□□□ -1.12
SPTLC1-204ENST00000469778 NDUFA12Q9UI09 145 aa8.03□□□□□ -1.12
SPTLC1-204ENST00000469778 A0A087WYN8 130 aa8.02□□□□□ -1.13
SPTLC1-204ENST00000469778 LGALS3P17931 250 aaKnown RBP8.02□□□□□ -1.13
SPTLC1-204ENST00000469778 STPG4Q8N801 248 aa8.02□□□□□ -1.13
SPTLC1-204ENST00000469778 ERG28Q9UKR5 140 aa8.02□□□□□ -1.13
SPTLC1-204ENST00000469778 CHTF8P0CG12 524 aa8.01□□□□□ -1.13
SPTLC1-204ENST00000469778 C9orf116Q5BN46 136 aaPredicted RBP8.01□□□□□ -1.13
SPTLC1-204ENST00000469778 FAM229AH3BQW9 127 aa8□□□□□ -1.13
SPTLC1-204ENST00000469778 PANO1I0J062 215 aa8□□□□□ -1.13
SPTLC1-204ENST00000469778 GAGE2EQ4V326 116 aa8□□□□□ -1.13
SPTLC1-204ENST00000469778 GAGE2DQ9UEU5 116 aa8□□□□□ -1.13
SPTLC1-204ENST00000469778 RYR1P21817 5038 aa7.99□□□□□ -1.13
SPTLC1-204ENST00000469778 HSBP1L1C9JCN9 74 aa7.99□□□□□ -1.13
SPTLC1-204ENST00000469778 Q8N1X5 172 aa7.99□□□□□ -1.13
SPTLC1-204ENST00000469778 KIAA1109Q2LD37 5005 aa7.98□□□□□ -1.13
SPTLC1-204ENST00000469778 SCGB1D1O95968 90 aa7.98□□□□□ -1.13
SPTLC1-204ENST00000469778 PFN2P35080 140 aa7.98□□□□□ -1.13
SPTLC1-204ENST00000469778 PLA2G2DQ9UNK4 145 aa7.98□□□□□ -1.13
SPTLC1-204ENST00000469778 LINC00158P58513 81 aa7.97□□□□□ -1.13
SPTLC1-204ENST00000469778 C7orf33Q8WU49 177 aa7.97□□□□□ -1.13
SPTLC1-204ENST00000469778 PLA2G1BP04054 148 aaKnown RBP7.96□□□□□ -1.14
SPTLC1-204ENST00000469778 TSPEAR-AS2P59090 65 aa7.96□□□□□ -1.14
SPTLC1-204ENST00000469778 MEIG1Q5JSS6 88 aa7.96□□□□□ -1.14
SPTLC1-204ENST00000469778 C9orf129Q5T035 196 aaKnown RBP7.96□□□□□ -1.14
SPTLC1-204ENST00000469778 DNAH8Q96JB1 4490 aa7.95□□□□□ -1.14
SPTLC1-204ENST00000469778 A0A1W2PNN7 141 aa7.95□□□□□ -1.14
SPTLC1-204ENST00000469778 TIMM17BO60830 172 aa7.95□□□□□ -1.14
SPTLC1-204ENST00000469778 RPL24P83731 157 aaKnown RBP7.95□□□□□ -1.14
SPTLC1-204ENST00000469778 LBHQ53QV2 105 aaPredicted RBP7.95□□□□□ -1.14
SPTLC1-204ENST00000469778 SND1-IT1Q9HBX3 110 aa7.95□□□□□ -1.14
SPTLC1-204ENST00000469778 XAGE1AQ9HD64 81 aa7.95□□□□□ -1.14
SPTLC1-204ENST00000469778 TP73-AS1Q9UF72 201 aa7.95□□□□□ -1.14
SPTLC1-204ENST00000469778 JOSD1Q15040 202 aaPredicted RBP7.94□□□□□ -1.14
SPTLC1-204ENST00000469778 LINC00528Q8N1L1 170 aa7.94□□□□□ -1.14
SPTLC1-204ENST00000469778 TMA7Q9Y2S6 64 aaKnown RBP7.94□□□□□ -1.14
SPTLC1-204ENST00000469778 APOBP04114 4563 aaKnown RBP7.93□□□□□ -1.14
SPTLC1-204ENST00000469778 IGLV5-37A0A075B6J1 123 aa7.93□□□□□ -1.14
SPTLC1-204ENST00000469778 LOC107984156A0A0G2JMH3 177 aa7.93□□□□□ -1.14
SPTLC1-204ENST00000469778 A0A0J9YXY3 114 aa7.93□□□□□ -1.14
SPTLC1-204ENST00000469778 ZNF815PA8K554 130 aa7.93□□□□□ -1.14
SPTLC1-204ENST00000469778 SMIM13P0DJ93 91 aa7.93□□□□□ -1.14
SPTLC1-204ENST00000469778 HAMPP81172 84 aa7.93□□□□□ -1.14
SPTLC1-204ENST00000469778 ARL17AQ8IVW1 177 aa7.93□□□□□ -1.14
SPTLC1-204ENST00000469778 ATOH7Q8N100 152 aa7.93□□□□□ -1.14
SPTLC1-204ENST00000469778 IGKV2D-26A0A0A0MRZ7 120 aa7.92□□□□□ -1.14
SPTLC1-204ENST00000469778 SMR3BP02814 79 aaPredicted RBP7.92□□□□□ -1.14
SPTLC1-204ENST00000469778 ANKRD39Q53RE8 183 aa7.92□□□□□ -1.14
SPTLC1-204ENST00000469778 Q6ZVH6 145 aa7.91□□□□□ -1.14
SPTLC1-204ENST00000469778 MIR7-3HGQ8N6C7 128 aa7.91□□□□□ -1.14
SPTLC1-204ENST00000469778 COPS9Q8WXC6 57 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms