RNA–Protein interactions for RNA: ENST00000466732.2

VPS13D-203, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 377 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-203ENST00000466732 Q5W150 140 aa1.99□□□□□ -2.09
VPS13D-203ENST00000466732 ZFAND2AQ8N6M9 145 aa1.99□□□□□ -2.09
VPS13D-203ENST00000466732 CNEP1R1Q8N9A8 125 aa1.99□□□□□ -2.09
VPS13D-203ENST00000466732 ZNF625Q96I27 306 aaPredicted RBP1.99□□□□□ -2.09
VPS13D-203ENST00000466732 ORMDL1Q9P0S3 153 aa1.99□□□□□ -2.09
VPS13D-203ENST00000466732 USF3Q68DE3 2245 aa1.98□□□□□ -2.09
VPS13D-203ENST00000466732 IGHV3-43A0A0B4J1X8 118 aa1.98□□□□□ -2.09
VPS13D-203ENST00000466732 IGHV1-69P01742 117 aa1.98□□□□□ -2.09
VPS13D-203ENST00000466732 IGHV3-30-3P0DP02 117 aa1.98□□□□□ -2.09
VPS13D-203ENST00000466732 DEFB134Q4QY38 66 aa1.98□□□□□ -2.09
VPS13D-203ENST00000466732 KRTAP13-2Q52LG2 175 aa1.98□□□□□ -2.09
VPS13D-203ENST00000466732 SPINK9Q5DT21 86 aa1.98□□□□□ -2.09
VPS13D-203ENST00000466732 HCP5Q6MZN7 132 aa1.98□□□□□ -2.09
VPS13D-203ENST00000466732 ZCCHC13Q8WW36 166 aaKnown RBP1.98□□□□□ -2.09
VPS13D-203ENST00000466732 LOC110117498A0A087WWA1 95 aa1.97□□□□□ -2.09
VPS13D-203ENST00000466732 IGHV3-74A0A0B4J1X5 117 aa1.97□□□□□ -2.09
VPS13D-203ENST00000466732 TRBV10-1A0A0K0K1A3 114 aa1.97□□□□□ -2.09
VPS13D-203ENST00000466732 MSMBP08118 114 aa1.97□□□□□ -2.09
VPS13D-203ENST00000466732 CGB3P0DN86 165 aa1.97□□□□□ -2.09
VPS13D-203ENST00000466732 CGB7P0DN87 165 aa1.97□□□□□ -2.09
VPS13D-203ENST00000466732 PDE6GP18545 87 aa1.97□□□□□ -2.09
VPS13D-203ENST00000466732 CRIP1P50238 77 aa1.97□□□□□ -2.09
VPS13D-203ENST00000466732 RNASE13Q5GAN3 156 aaKnown RBP1.97□□□□□ -2.09
VPS13D-203ENST00000466732 FAM27BQ5VT28 67 aa1.97□□□□□ -2.09
VPS13D-203ENST00000466732 MIR7-3HGQ8N6C7 128 aa1.97□□□□□ -2.09
VPS13D-203ENST00000466732 HIGD2AQ9BW72 106 aa1.97□□□□□ -2.09
VPS13D-203ENST00000466732 FGF23Q9GZV9 251 aaPredicted RBP1.97□□□□□ -2.09
VPS13D-203ENST00000466732 LINC01558Q9Y6Z2 57 aa1.97□□□□□ -2.09
VPS13D-203ENST00000466732 RP1P56715 2156 aa1.97□□□□□ -2.09
VPS13D-203ENST00000466732 MALRD1Q5VYJ5 2156 aa1.97□□□□□ -2.09
VPS13D-203ENST00000466732 IGKV1OR2-108A0A075B7D4 117 aa1.96□□□□□ -2.1
VPS13D-203ENST00000466732 IGHV3OR16-8A0A075B7F1 116 aa1.96□□□□□ -2.1
VPS13D-203ENST00000466732 NCR3O14931 201 aa1.96□□□□□ -2.1
VPS13D-203ENST00000466732 CMC4P56277 68 aaPredicted RBP1.96□□□□□ -2.1
VPS13D-203ENST00000466732 ADM2Q7Z4H4 148 aa1.96□□□□□ -2.1
VPS13D-203ENST00000466732 SPANXA2-OT1Q8N9U9 137 aa1.96□□□□□ -2.1
VPS13D-203ENST00000466732 Q8NAQ8 132 aa1.96□□□□□ -2.1
VPS13D-203ENST00000466732 Q8NDZ9 215 aa1.96□□□□□ -2.1
VPS13D-203ENST00000466732 LINC00308Q8TCZ7 52 aa1.96□□□□□ -2.1
VPS13D-203ENST00000466732 LINC00208Q96KT6 92 aa1.96□□□□□ -2.1
VPS13D-203ENST00000466732 PLAC8Q9NZF1 115 aa1.96□□□□□ -2.1
VPS13D-203ENST00000466732 Q9Y3F1 56 aa1.96□□□□□ -2.1
VPS13D-203ENST00000466732 PDE4DIPQ5VU43 2346 aa1.95□□□□□ -2.1
VPS13D-203ENST00000466732 IGHV3-21A0A0B4J1V1 117 aa1.95□□□□□ -2.1
VPS13D-203ENST00000466732 IGHV3-73A0A0B4J1V6 119 aa1.95□□□□□ -2.1
VPS13D-203ENST00000466732 A0A1W2PNM2 257 aa1.95□□□□□ -2.1
VPS13D-203ENST00000466732 H3BQ85 93 aa1.95□□□□□ -2.1
VPS13D-203ENST00000466732 K7ERS5 55 aa1.95□□□□□ -2.1
VPS13D-203ENST00000466732 IGHV3-11P01762 117 aa1.95□□□□□ -2.1
VPS13D-203ENST00000466732 CLPSP04118 112 aa1.95□□□□□ -2.1
VPS13D-203ENST00000466732 HAMPP81172 84 aa1.95□□□□□ -2.1
VPS13D-203ENST00000466732 PRCDQ00LT1 54 aa1.95□□□□□ -2.1
VPS13D-203ENST00000466732 DEFB114Q30KQ6 69 aa1.95□□□□□ -2.1
VPS13D-203ENST00000466732 CSAG1Q6PB30 78 aa1.95□□□□□ -2.1
VPS13D-203ENST00000466732 C15orf56Q8N910 161 aa1.95□□□□□ -2.1
VPS13D-203ENST00000466732 LENEPQ9Y5L5 61 aa1.95□□□□□ -2.1
VPS13D-203ENST00000466732 CADP27708 2225 aa1.95□□□□□ -2.1
VPS13D-203ENST00000466732 PRRC2BQ5JSZ5 2229 aaKnown RBP1.95□□□□□ -2.1
VPS13D-203ENST00000466732 IGKV2-29A2NJV5 120 aaPredicted RBP1.94□□□□□ -2.1
VPS13D-203ENST00000466732 CLPSL1A2RUU4 121 aa1.94□□□□□ -2.1
VPS13D-203ENST00000466732 H0YGG7 62 aa1.94□□□□□ -2.1
VPS13D-203ENST00000466732 NDUFA1O15239 70 aa1.94□□□□□ -2.1
VPS13D-203ENST00000466732 CNBPP62633 177 aaKnown RBP1.94□□□□□ -2.1
VPS13D-203ENST00000466732 SPAG11BQ08648 103 aa1.94□□□□□ -2.1
VPS13D-203ENST00000466732 MIR22HGQ0VDD5 57 aa1.94□□□□□ -2.1
VPS13D-203ENST00000466732 LUZP6Q538Z0 58 aa1.94□□□□□ -2.1
VPS13D-203ENST00000466732 SPAG11AQ6PDA7 123 aa1.94□□□□□ -2.1
VPS13D-203ENST00000466732 Q6ZQT0 140 aa1.94□□□□□ -2.1
VPS13D-203ENST00000466732 MUC7Q8TAX7 377 aa1.94□□□□□ -2.1
VPS13D-203ENST00000466732 COX7B2Q8TF08 81 aa1.94□□□□□ -2.1
VPS13D-203ENST00000466732 CAMK2N2Q96S95 79 aa1.94□□□□□ -2.1
VPS13D-203ENST00000466732 KLK9Q9UKQ9 250 aa1.94□□□□□ -2.1
VPS13D-203ENST00000466732 F5P12259 2224 aa1.94□□□□□ -2.1
VPS13D-203ENST00000466732 MUC19Q7Z5P9 8384 aa1.93□□□□□ -2.1
VPS13D-203ENST00000466732 COL27A1Q8IZC6 1860 aaPredicted RBP1.93□□□□□ -2.1
VPS13D-203ENST00000466732 IGKV1D-37A0A075B6S9 117 aa1.93□□□□□ -2.1
VPS13D-203ENST00000466732 A0A087WSZ3 146 aa1.93□□□□□ -2.1
VPS13D-203ENST00000466732 IGKV3D-11A0A0A0MRZ8 115 aa1.93□□□□□ -2.1
VPS13D-203ENST00000466732 IGHV3-49A0A0A0MS15 119 aa1.93□□□□□ -2.1
VPS13D-203ENST00000466732 IGHV1-18A0A0C4DH31 117 aa1.93□□□□□ -2.1
VPS13D-203ENST00000466732 IGHV3-66A0A0C4DH42 116 aa1.93□□□□□ -2.1
VPS13D-203ENST00000466732 A8MWP4 228 aa1.93□□□□□ -2.1
VPS13D-203ENST00000466732 LECT2O14960 151 aa1.93□□□□□ -2.1
VPS13D-203ENST00000466732 KRTAP5-8O75690 187 aa1.93□□□□□ -2.1
VPS13D-203ENST00000466732 STATHP02808 62 aa1.93□□□□□ -2.1
VPS13D-203ENST00000466732 IGHV1-8P0DP01 117 aa1.93□□□□□ -2.1
VPS13D-203ENST00000466732 NNATQ16517 81 aa1.93□□□□□ -2.1
VPS13D-203ENST00000466732 WFDC10AQ9H1F0 79 aa1.93□□□□□ -2.1
VPS13D-203ENST00000466732 C8orf17Q9NRJ1 99 aa1.93□□□□□ -2.1
VPS13D-203ENST00000466732 SEC16AO15027 2179 aa1.92□□□□□ -2.1
VPS13D-203ENST00000466732 IGHV3-64A0A075B6Q5 118 aa1.92□□□□□ -2.1
VPS13D-203ENST00000466732 A0A1B0GVX0 72 aa1.92□□□□□ -2.1
VPS13D-203ENST00000466732 NDUFA4O00483 81 aa1.92□□□□□ -2.1
VPS13D-203ENST00000466732 IGHV3-53P01767 116 aa1.92□□□□□ -2.1
VPS13D-203ENST00000466732 IGKV4-1P06312 121 aa1.92□□□□□ -2.1
VPS13D-203ENST00000466732 ERHP84090 104 aaKnown RBP1.92□□□□□ -2.1
VPS13D-203ENST00000466732 TTTY12Q9BZ98 90 aa1.92□□□□□ -2.1
VPS13D-203ENST00000466732 A0A0C4DFX4 3053 aa1.92□□□□□ -2.1
VPS13D-203ENST00000466732 IGHV3-15A0A0B4J1V0 119 aa1.91□□□□□ -2.1
VPS13D-203ENST00000466732 IGHV1-3A0A0C4DH29 117 aa1.91□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms