RNA–Protein interactions for RNA: ENST00000465601.1

CHPF2-202, Transcript of chondroitin polymerizing factor 2, humanhuman

TSL 3

Gene CHPF2, Length 782 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-202ENST00000465601 HIST1H2BKO60814 126 aa7.86□□□□□ -1.15
CHPF2-202ENST00000465601 HIST1H2BJP06899 126 aa7.86□□□□□ -1.15
CHPF2-202ENST00000465601 SPINK8P0C7L1 97 aa7.86□□□□□ -1.15
CHPF2-202ENST00000465601 HIST1H2BOP23527 126 aa7.86□□□□□ -1.15
CHPF2-202ENST00000465601 HIST1H2BBP33778 126 aa7.86□□□□□ -1.15
CHPF2-202ENST00000465601 HIST1H2BDP58876 126 aa7.86□□□□□ -1.15
CHPF2-202ENST00000465601 HIST1H2BCP62807 126 aa7.86□□□□□ -1.15
CHPF2-202ENST00000465601 HIST2H2BEQ16778 126 aa7.86□□□□□ -1.15
CHPF2-202ENST00000465601 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.86□□□□□ -1.15
CHPF2-202ENST00000465601 LINC00528Q8N1L1 170 aa7.86□□□□□ -1.15
CHPF2-202ENST00000465601 HIST1H2BHQ93079 126 aa7.86□□□□□ -1.15
CHPF2-202ENST00000465601 HIST1H2BNQ99877 126 aa7.86□□□□□ -1.15
CHPF2-202ENST00000465601 HIST1H2BMQ99879 126 aa7.86□□□□□ -1.15
CHPF2-202ENST00000465601 C6orf48Q9UBA6 75 aa7.86□□□□□ -1.15
CHPF2-202ENST00000465601 PKIGQ9Y2B9 76 aa7.86□□□□□ -1.15
CHPF2-202ENST00000465601 FLG2Q5D862 2391 aaPredicted RBP7.86□□□□□ -1.15
CHPF2-202ENST00000465601 ZNF22P17026 224 aaPredicted RBP7.85□□□□□ -1.15
CHPF2-202ENST00000465601 PTTG1IPP53801 180 aa7.85□□□□□ -1.15
CHPF2-202ENST00000465601 CKS1BP61024 79 aa7.85□□□□□ -1.15
CHPF2-202ENST00000465601 Q8IZM0 81 aa7.85□□□□□ -1.15
CHPF2-202ENST00000465601 CHTOPQ9Y3Y2 248 aaKnown RBP7.85□□□□□ -1.15
CHPF2-202ENST00000465601 C11orf86A6NJI1 115 aa7.84□□□□□ -1.15
CHPF2-202ENST00000465601 H3BRM9 83 aa7.84□□□□□ -1.15
CHPF2-202ENST00000465601 LEPROTL1O95214 131 aa7.84□□□□□ -1.15
CHPF2-202ENST00000465601 FABP4P15090 132 aa7.84□□□□□ -1.15
CHPF2-202ENST00000465601 RPL18AQ02543 176 aaKnown RBP7.84□□□□□ -1.15
CHPF2-202ENST00000465601 STPG4Q8N801 248 aa7.84□□□□□ -1.15
CHPF2-202ENST00000465601 LINC00474Q9P2X8 69 aa7.84□□□□□ -1.15
CHPF2-202ENST00000465601 PCLOQ9Y6V0 5065 aa7.83□□□□□ -1.16
CHPF2-202ENST00000465601 TRAV12-1A0A0B4J245 112 aa7.83□□□□□ -1.16
CHPF2-202ENST00000465601 TRBV30A0A0K0K1B3 111 aa7.83□□□□□ -1.16
CHPF2-202ENST00000465601 C9orf116Q5BN46 136 aaPredicted RBP7.83□□□□□ -1.16
CHPF2-202ENST00000465601 COX7B2Q8TF08 81 aa7.83□□□□□ -1.16
CHPF2-202ENST00000465601 PLAC8Q9NZF1 115 aa7.83□□□□□ -1.16
CHPF2-202ENST00000465601 H0Y8G0 127 aa7.82□□□□□ -1.16
CHPF2-202ENST00000465601 TMEM170BQ5T4T1 132 aa7.82□□□□□ -1.16
CHPF2-202ENST00000465601 HSPB8Q9UJY1 196 aa7.82□□□□□ -1.16
CHPF2-202ENST00000465601 PLA2G1BP04054 148 aaKnown RBP7.81□□□□□ -1.16
CHPF2-202ENST00000465601 TLX1NBP0CAT3 122 aa7.81□□□□□ -1.16
CHPF2-202ENST00000465601 GAGE2EQ4V326 116 aa7.81□□□□□ -1.16
CHPF2-202ENST00000465601 Q6ZRP5 223 aa7.81□□□□□ -1.16
CHPF2-202ENST00000465601 GAGE2DQ9UEU5 116 aa7.81□□□□□ -1.16
CHPF2-202ENST00000465601 IGLV5-39A0A0G2JS06 123 aa7.8□□□□□ -1.16
CHPF2-202ENST00000465601 A0A1W2PNN7 141 aa7.8□□□□□ -1.16
CHPF2-202ENST00000465601 F8VRH5 84 aa7.8□□□□□ -1.16
CHPF2-202ENST00000465601 CXCL5P42830 114 aa7.8□□□□□ -1.16
CHPF2-202ENST00000465601 ODF1Q14990 250 aa7.79□□□□□ -1.16
CHPF2-202ENST00000465601 NDUFC2-KCTD14E9PQ53 114 aa7.78□□□□□ -1.16
CHPF2-202ENST00000465601 INAFM2P0DMQ5 153 aa7.78□□□□□ -1.16
CHPF2-202ENST00000465601 RPL37AP61513 92 aaKnown RBP7.78□□□□□ -1.16
CHPF2-202ENST00000465601 TMEM223A0PJW6 202 aa7.77□□□□□ -1.17
CHPF2-202ENST00000465601 KRTAP10-4P60372 401 aaPredicted RBP7.77□□□□□ -1.17
CHPF2-202ENST00000465601 MAP1LC3CQ9BXW4 147 aa7.77□□□□□ -1.17
CHPF2-202ENST00000465601 FAM168BA1KXE4 195 aa7.76□□□□□ -1.17
CHPF2-202ENST00000465601 COA6Q5JTJ3 125 aaKnown RBP7.76□□□□□ -1.17
CHPF2-202ENST00000465601 C7orf33Q8WU49 177 aa7.76□□□□□ -1.17
CHPF2-202ENST00000465601 PMCHL2Q9BQD1 86 aa7.76□□□□□ -1.17
CHPF2-202ENST00000465601 C9orf129Q5T035 196 aaKnown RBP7.75□□□□□ -1.17
CHPF2-202ENST00000465601 PKHD1L1Q86WI1 4243 aa7.75□□□□□ -1.17
CHPF2-202ENST00000465601 DPM2O94777 84 aa7.74□□□□□ -1.17
CHPF2-202ENST00000465601 XAGE1AQ9HD64 81 aa7.74□□□□□ -1.17
CHPF2-202ENST00000465601 SYS1-DBNDD2H3BUS1 97 aa7.73□□□□□ -1.17
CHPF2-202ENST00000465601 PLNP26678 52 aa7.73□□□□□ -1.17
CHPF2-202ENST00000465601 PHF5AQ7RTV0 110 aaKnown RBP7.73□□□□□ -1.17
CHPF2-202ENST00000465601 FAM19A5Q7Z5A7 132 aaPredicted RBP7.73□□□□□ -1.17
CHPF2-202ENST00000465601 ZNF625Q96I27 306 aaPredicted RBP7.73□□□□□ -1.17
CHPF2-202ENST00000465601 MYCBP2O75592 4640 aa7.73□□□□□ -1.17
CHPF2-202ENST00000465601 IGKCP01834 107 aa7.72□□□□□ -1.17
CHPF2-202ENST00000465601 PFN2P35080 140 aa7.72□□□□□ -1.17
CHPF2-202ENST00000465601 KRTAP7-1Q8IUC3 87 aa7.72□□□□□ -1.17
CHPF2-202ENST00000465601 C3orf79P0CE67 100 aa7.7□□□□□ -1.18
CHPF2-202ENST00000465601 HNRNPA3P51991 378 aaKnown RBP7.7□□□□□ -1.18
CHPF2-202ENST00000465601 ERG28Q9UKR5 140 aa7.7□□□□□ -1.18
CHPF2-202ENST00000465601 LEPROTO15243 131 aa7.69□□□□□ -1.18
CHPF2-202ENST00000465601 KRTDAPP60985 99 aa7.69□□□□□ -1.18
CHPF2-202ENST00000465601 PRR3P79522 188 aaKnown RBP7.69□□□□□ -1.18
CHPF2-202ENST00000465601 SERTAD4-AS1Q5TG53 156 aa7.69□□□□□ -1.18
CHPF2-202ENST00000465601 SFTA2Q6UW10 78 aa7.69□□□□□ -1.18
CHPF2-202ENST00000465601 PET117Q6UWS5 81 aa7.69□□□□□ -1.18
CHPF2-202ENST00000465601 DMBT1Q9UGM3 2413 aaPredicted RBP7.69□□□□□ -1.18
CHPF2-202ENST00000465601 M0QXV9 152 aa7.68□□□□□ -1.18
CHPF2-202ENST00000465601 TSPEAR-AS2P59090 65 aa7.68□□□□□ -1.18
CHPF2-202ENST00000465601 HERVK_113P61574 105 aa7.68□□□□□ -1.18
CHPF2-202ENST00000465601 LINC01545Q5VT33 79 aa7.68□□□□□ -1.18
CHPF2-202ENST00000465601 PLEKHB2Q96CS7 222 aa7.68□□□□□ -1.18
CHPF2-202ENST00000465601 NDUFA12Q9UI09 145 aa7.68□□□□□ -1.18
CHPF2-202ENST00000465601 LRP1Q07954 4544 aaKnown RBP7.68□□□□□ -1.18
CHPF2-202ENST00000465601 A0A0U1RRA0 63 aa7.67□□□□□ -1.18
CHPF2-202ENST00000465601 LINC00158P58513 81 aa7.67□□□□□ -1.18
CHPF2-202ENST00000465601 COX17Q14061 63 aa7.67□□□□□ -1.18
CHPF2-202ENST00000465601 KRTAP11-1Q8IUC1 163 aa7.67□□□□□ -1.18
CHPF2-202ENST00000465601 PSORS1C2Q9UIG4 136 aa7.67□□□□□ -1.18
CHPF2-202ENST00000465601 C22orf24Q9Y442 160 aa7.67□□□□□ -1.18
CHPF2-202ENST00000465601 FAT3Q8TDW7 4589 aa7.66□□□□□ -1.18
CHPF2-202ENST00000465601 MYMXA0A1B0GTQ4 84 aa7.66□□□□□ -1.18
CHPF2-202ENST00000465601 J3QQQ9 107 aa7.66□□□□□ -1.18
CHPF2-202ENST00000465601 SND1-IT1Q9HBX3 110 aa7.66□□□□□ -1.18
CHPF2-202ENST00000465601 S100A6P06703 90 aa7.65□□□□□ -1.18
CHPF2-202ENST00000465601 SMIM13P0DJ93 91 aa7.65□□□□□ -1.18
CHPF2-202ENST00000465601 UBE2BP63146 152 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 129.3 ms