RNA–Protein interactions for RNA: ENST00000464263.1

RAB11FIP3-208, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 3

Gene RAB11FIP3, Length 329 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-208ENST00000464263 ABCA13Q86UQ4 5058 aa9.74□□□□□ -0.85
RAB11FIP3-208ENST00000464263 PRSS2P07478 247 aa9.74□□□□□ -0.85
RAB11FIP3-208ENST00000464263 S100A1P23297 94 aa9.74□□□□□ -0.85
RAB11FIP3-208ENST00000464263 C6orf226Q5I0X4 101 aa9.74□□□□□ -0.85
RAB11FIP3-208ENST00000464263 TRAV12-1A0A0B4J245 112 aa9.73□□□□□ -0.85
RAB11FIP3-208ENST00000464263 HIST1H2BKO60814 126 aa9.73□□□□□ -0.85
RAB11FIP3-208ENST00000464263 HIST1H2BJP06899 126 aa9.73□□□□□ -0.85
RAB11FIP3-208ENST00000464263 TLX1NBP0CAT3 122 aa9.73□□□□□ -0.85
RAB11FIP3-208ENST00000464263 HIST1H2BOP23527 126 aa9.73□□□□□ -0.85
RAB11FIP3-208ENST00000464263 HIST1H2BBP33778 126 aa9.73□□□□□ -0.85
RAB11FIP3-208ENST00000464263 HIST1H2BDP58876 126 aa9.73□□□□□ -0.85
RAB11FIP3-208ENST00000464263 HIST1H2BCP62807 126 aa9.73□□□□□ -0.85
RAB11FIP3-208ENST00000464263 GAGE2BQ13066 116 aa9.73□□□□□ -0.85
RAB11FIP3-208ENST00000464263 HIST2H2BEQ16778 126 aa9.73□□□□□ -0.85
RAB11FIP3-208ENST00000464263 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.73□□□□□ -0.85
RAB11FIP3-208ENST00000464263 STPG4Q8N801 248 aa9.73□□□□□ -0.85
RAB11FIP3-208ENST00000464263 HIST1H2BHQ93079 126 aa9.73□□□□□ -0.85
RAB11FIP3-208ENST00000464263 HIST1H2BNQ99877 126 aa9.73□□□□□ -0.85
RAB11FIP3-208ENST00000464263 HIST1H2BMQ99879 126 aa9.73□□□□□ -0.85
RAB11FIP3-208ENST00000464263 TRBV30A0A0K0K1B3 111 aa9.72□□□□□ -0.85
RAB11FIP3-208ENST00000464263 C11orf86A6NJI1 115 aa9.72□□□□□ -0.85
RAB11FIP3-208ENST00000464263 SPINK8P0C7L1 97 aa9.72□□□□□ -0.85
RAB11FIP3-208ENST00000464263 ZNF22P17026 224 aaPredicted RBP9.72□□□□□ -0.85
RAB11FIP3-208ENST00000464263 CKS1BP61024 79 aa9.72□□□□□ -0.85
RAB11FIP3-208ENST00000464263 CHTOPQ9Y3Y2 248 aaKnown RBP9.72□□□□□ -0.85
RAB11FIP3-208ENST00000464263 H3BRM9 83 aa9.71□□□□□ -0.86
RAB11FIP3-208ENST00000464263 ATP6V1G1O75348 118 aa9.71□□□□□ -0.86
RAB11FIP3-208ENST00000464263 LEPROTL1O95214 131 aa9.71□□□□□ -0.86
RAB11FIP3-208ENST00000464263 KRTAP10-4P60372 401 aaPredicted RBP9.71□□□□□ -0.86
RAB11FIP3-208ENST00000464263 COX7B2Q8TF08 81 aa9.71□□□□□ -0.86
RAB11FIP3-208ENST00000464263 PLA2G1BP04054 148 aaKnown RBP9.7□□□□□ -0.86
RAB11FIP3-208ENST00000464263 RPL18AQ02543 176 aaKnown RBP9.7□□□□□ -0.86
RAB11FIP3-208ENST00000464263 Q6ZRP5 223 aa9.7□□□□□ -0.86
RAB11FIP3-208ENST00000464263 SRRM2Q9UQ35 2752 aaKnown RBP9.69□□□□□ -0.86
RAB11FIP3-208ENST00000464263 IGLV5-39A0A0G2JS06 123 aa9.69□□□□□ -0.86
RAB11FIP3-208ENST00000464263 C9orf116Q5BN46 136 aaPredicted RBP9.69□□□□□ -0.86
RAB11FIP3-208ENST00000464263 A0A1W2PNN7 141 aa9.68□□□□□ -0.86
RAB11FIP3-208ENST00000464263 F8VRH5 84 aa9.68□□□□□ -0.86
RAB11FIP3-208ENST00000464263 CXCL5P42830 114 aa9.68□□□□□ -0.86
RAB11FIP3-208ENST00000464263 NDUFC2-KCTD14E9PQ53 114 aa9.67□□□□□ -0.86
RAB11FIP3-208ENST00000464263 INAFM2P0DMQ5 153 aa9.67□□□□□ -0.86
RAB11FIP3-208ENST00000464263 FABP4P15090 132 aa9.67□□□□□ -0.86
RAB11FIP3-208ENST00000464263 TMEM170BQ5T4T1 132 aa9.67□□□□□ -0.86
RAB11FIP3-208ENST00000464263 HSPB8Q9UJY1 196 aa9.67□□□□□ -0.86
RAB11FIP3-208ENST00000464263 ODF1Q14990 250 aa9.66□□□□□ -0.86
RAB11FIP3-208ENST00000464263 RPL37AP61513 92 aaKnown RBP9.65□□□□□ -0.86
RAB11FIP3-208ENST00000464263 GAGE2EQ4V326 116 aa9.65□□□□□ -0.86
RAB11FIP3-208ENST00000464263 GAGE2DQ9UEU5 116 aa9.65□□□□□ -0.86
RAB11FIP3-208ENST00000464263 TMEM223A0PJW6 202 aa9.64□□□□□ -0.87
RAB11FIP3-208ENST00000464263 H0Y8G0 127 aa9.64□□□□□ -0.87
RAB11FIP3-208ENST00000464263 COA6Q5JTJ3 125 aaKnown RBP9.64□□□□□ -0.87
RAB11FIP3-208ENST00000464263 C7orf33Q8WU49 177 aa9.63□□□□□ -0.87
RAB11FIP3-208ENST00000464263 FAM168BA1KXE4 195 aa9.62□□□□□ -0.87
RAB11FIP3-208ENST00000464263 C9orf129Q5T035 196 aaKnown RBP9.62□□□□□ -0.87
RAB11FIP3-208ENST00000464263 KRTAP7-1Q8IUC3 87 aa9.62□□□□□ -0.87
RAB11FIP3-208ENST00000464263 MAP1LC3CQ9BXW4 147 aa9.61□□□□□ -0.87
RAB11FIP3-208ENST00000464263 PKHD1L1Q86WI1 4243 aa9.6□□□□□ -0.87
RAB11FIP3-208ENST00000464263 PHF5AQ7RTV0 110 aaKnown RBP9.59□□□□□ -0.87
RAB11FIP3-208ENST00000464263 PLNP26678 52 aa9.58□□□□□ -0.88
RAB11FIP3-208ENST00000464263 HNRNPA3P51991 378 aaKnown RBP9.58□□□□□ -0.88
RAB11FIP3-208ENST00000464263 ZNF625Q96I27 306 aaPredicted RBP9.58□□□□□ -0.88
RAB11FIP3-208ENST00000464263 PMCHL2Q9BQD1 86 aa9.58□□□□□ -0.88
RAB11FIP3-208ENST00000464263 XAGE1AQ9HD64 81 aa9.58□□□□□ -0.88
RAB11FIP3-208ENST00000464263 SYS1-DBNDD2H3BUS1 97 aa9.57□□□□□ -0.88
RAB11FIP3-208ENST00000464263 DPM2O94777 84 aa9.57□□□□□ -0.88
RAB11FIP3-208ENST00000464263 FAM19A5Q7Z5A7 132 aaPredicted RBP9.57□□□□□ -0.88
RAB11FIP3-208ENST00000464263 IGKCP01834 107 aa9.56□□□□□ -0.88
RAB11FIP3-208ENST00000464263 SFTA2Q6UW10 78 aa9.56□□□□□ -0.88
RAB11FIP3-208ENST00000464263 FLG2Q5D862 2391 aaPredicted RBP9.55□□□□□ -0.88
RAB11FIP3-208ENST00000464263 PFN2P35080 140 aa9.55□□□□□ -0.88
RAB11FIP3-208ENST00000464263 PRR3P79522 188 aaKnown RBP9.55□□□□□ -0.88
RAB11FIP3-208ENST00000464263 SERTAD4-AS1Q5TG53 156 aa9.55□□□□□ -0.88
RAB11FIP3-208ENST00000464263 ERG28Q9UKR5 140 aa9.55□□□□□ -0.88
RAB11FIP3-208ENST00000464263 COX17Q14061 63 aa9.54□□□□□ -0.88
RAB11FIP3-208ENST00000464263 KRTAP11-1Q8IUC1 163 aa9.53□□□□□ -0.88
RAB11FIP3-208ENST00000464263 PLA2G2DQ9UNK4 145 aa9.53□□□□□ -0.88
RAB11FIP3-208ENST00000464263 M0QXV9 152 aa9.52□□□□□ -0.89
RAB11FIP3-208ENST00000464263 LEPROTO15243 131 aa9.52□□□□□ -0.89
RAB11FIP3-208ENST00000464263 C3orf79P0CE67 100 aa9.52□□□□□ -0.89
RAB11FIP3-208ENST00000464263 LINC01545Q5VT33 79 aa9.52□□□□□ -0.89
RAB11FIP3-208ENST00000464263 PET117Q6UWS5 81 aa9.52□□□□□ -0.89
RAB11FIP3-208ENST00000464263 PSORS1C2Q9UIG4 136 aa9.52□□□□□ -0.89
RAB11FIP3-208ENST00000464263 C22orf24Q9Y442 160 aa9.52□□□□□ -0.89
RAB11FIP3-208ENST00000464263 TSPEAR-AS2P59090 65 aa9.51□□□□□ -0.89
RAB11FIP3-208ENST00000464263 MYCBP2O75592 4640 aa9.51□□□□□ -0.89
RAB11FIP3-208ENST00000464263 PLEKHB2Q96CS7 222 aa9.5□□□□□ -0.89
RAB11FIP3-208ENST00000464263 SND1-IT1Q9HBX3 110 aa9.5□□□□□ -0.89
RAB11FIP3-208ENST00000464263 NDUFA12Q9UI09 145 aa9.5□□□□□ -0.89
RAB11FIP3-208ENST00000464263 HERVK_113P61574 105 aa9.49□□□□□ -0.89
RAB11FIP3-208ENST00000464263 HERV-K104P63124 156 aa9.49□□□□□ -0.89
RAB11FIP3-208ENST00000464263 SRSF9Q13242 221 aaKnown RBP eCLIP9.49□□□□□ -0.893e-6■■■■□ 23.3
RAB11FIP3-208ENST00000464263 TP73-AS1Q9UF72 201 aa9.49□□□□□ -0.89
RAB11FIP3-208ENST00000464263 IGLV5-37A0A075B6J1 123 aa9.48□□□□□ -0.89
RAB11FIP3-208ENST00000464263 MYMXA0A1B0GTQ4 84 aa9.48□□□□□ -0.89
RAB11FIP3-208ENST00000464263 J3QQQ9 107 aa9.48□□□□□ -0.89
RAB11FIP3-208ENST00000464263 LINC00158P58513 81 aa9.48□□□□□ -0.89
RAB11FIP3-208ENST00000464263 KRTDAPP60985 99 aa9.48□□□□□ -0.89
RAB11FIP3-208ENST00000464263 KRTAP29-1A8MX34 341 aaPredicted RBP9.47□□□□□ -0.89
RAB11FIP3-208ENST00000464263 E9PLD3 99 aa9.47□□□□□ -0.89
RAB11FIP3-208ENST00000464263 LBHQ53QV2 105 aaPredicted RBP9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms