RNA–Protein interactions for RNA: ENST00000463093.5

SSBP1-203, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 5

Gene SSBP1, Length 600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-203ENST00000463093 HIST1H2BDP58876 126 aa8.65□□□□□ -1.02
SSBP1-203ENST00000463093 HIST1H2BCP62807 126 aa8.65□□□□□ -1.02
SSBP1-203ENST00000463093 HIST2H2BEQ16778 126 aa8.65□□□□□ -1.02
SSBP1-203ENST00000463093 C6orf226Q5I0X4 101 aa8.65□□□□□ -1.02
SSBP1-203ENST00000463093 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.65□□□□□ -1.02
SSBP1-203ENST00000463093 HIST1H2BHQ93079 126 aa8.65□□□□□ -1.02
SSBP1-203ENST00000463093 HIST1H2BNQ99877 126 aa8.65□□□□□ -1.02
SSBP1-203ENST00000463093 HIST1H2BMQ99879 126 aa8.65□□□□□ -1.02
SSBP1-203ENST00000463093 LINC00474Q9P2X8 69 aa8.65□□□□□ -1.02
SSBP1-203ENST00000463093 A0A096LNI7 61 aa8.64□□□□□ -1.03
SSBP1-203ENST00000463093 TRAV12-1A0A0B4J245 112 aa8.64□□□□□ -1.03
SSBP1-203ENST00000463093 IGKV2-24A0A0C4DH68 120 aa8.64□□□□□ -1.03
SSBP1-203ENST00000463093 SMIM1B2RUZ4 78 aa8.64□□□□□ -1.03
SSBP1-203ENST00000463093 PRSS2P07478 247 aa8.64□□□□□ -1.03
SSBP1-203ENST00000463093 MAJINQ3KP22 176 aa8.64□□□□□ -1.03
SSBP1-203ENST00000463093 C2orf82Q6UX34 121 aa8.64□□□□□ -1.03
SSBP1-203ENST00000463093 Q8IZM0 81 aa8.64□□□□□ -1.03
SSBP1-203ENST00000463093 PLAC8Q9NZF1 115 aa8.64□□□□□ -1.03
SSBP1-203ENST00000463093 TOMM7Q9P0U1 55 aa8.64□□□□□ -1.03
SSBP1-203ENST00000463093 C6orf48Q9UBA6 75 aa8.64□□□□□ -1.03
SSBP1-203ENST00000463093 H3BRM9 83 aa8.63□□□□□ -1.03
SSBP1-203ENST00000463093 ATP6V1G1O75348 118 aa8.63□□□□□ -1.03
SSBP1-203ENST00000463093 PTTG1IPP53801 180 aa8.63□□□□□ -1.03
SSBP1-203ENST00000463093 CKS1BP61024 79 aa8.63□□□□□ -1.03
SSBP1-203ENST00000463093 GAGE2BQ13066 116 aa8.63□□□□□ -1.03
SSBP1-203ENST00000463093 CHTOPQ9Y3Y2 248 aaKnown RBP8.63□□□□□ -1.03
SSBP1-203ENST00000463093 TRBV30A0A0K0K1B3 111 aa8.62□□□□□ -1.03
SSBP1-203ENST00000463093 C11orf86A6NJI1 115 aa8.62□□□□□ -1.03
SSBP1-203ENST00000463093 LEPROTL1O95214 131 aa8.62□□□□□ -1.03
SSBP1-203ENST00000463093 SPINK8P0C7L1 97 aa8.62□□□□□ -1.03
SSBP1-203ENST00000463093 Q5VSD8 79 aa8.62□□□□□ -1.03
SSBP1-203ENST00000463093 TLX1NBP0CAT3 122 aa8.61□□□□□ -1.03
SSBP1-203ENST00000463093 ZNF22P17026 224 aaPredicted RBP8.61□□□□□ -1.03
SSBP1-203ENST00000463093 STPG4Q8N801 248 aa8.61□□□□□ -1.03
SSBP1-203ENST00000463093 COX7B2Q8TF08 81 aa8.61□□□□□ -1.03
SSBP1-203ENST00000463093 HSPB8Q9UJY1 196 aa8.61□□□□□ -1.03
SSBP1-203ENST00000463093 FAT1Q14517 4588 aa8.61□□□□□ -1.03
SSBP1-203ENST00000463093 IGLV5-39A0A0G2JS06 123 aa8.59□□□□□ -1.03
SSBP1-203ENST00000463093 PLA2G1BP04054 148 aaKnown RBP8.59□□□□□ -1.03
SSBP1-203ENST00000463093 FABP4P15090 132 aa8.59□□□□□ -1.03
SSBP1-203ENST00000463093 CXCL5P42830 114 aa8.59□□□□□ -1.03
SSBP1-203ENST00000463093 F8VRH5 84 aa8.58□□□□□ -1.04
SSBP1-203ENST00000463093 RPL18AQ02543 176 aaKnown RBP8.58□□□□□ -1.04
SSBP1-203ENST00000463093 C9orf116Q5BN46 136 aaPredicted RBP8.58□□□□□ -1.04
SSBP1-203ENST00000463093 COA6Q5JTJ3 125 aaKnown RBP8.58□□□□□ -1.04
SSBP1-203ENST00000463093 TMEM170BQ5T4T1 132 aa8.58□□□□□ -1.04
SSBP1-203ENST00000463093 Q6ZRP5 223 aa8.58□□□□□ -1.04
SSBP1-203ENST00000463093 FLG2Q5D862 2391 aaPredicted RBP8.58□□□□□ -1.04
SSBP1-203ENST00000463093 A0A1W2PNN7 141 aa8.57□□□□□ -1.04
SSBP1-203ENST00000463093 NDUFC2-KCTD14E9PQ53 114 aa8.57□□□□□ -1.04
SSBP1-203ENST00000463093 ODF1Q14990 250 aa8.57□□□□□ -1.04
SSBP1-203ENST00000463093 GAGE2EQ4V326 116 aa8.56□□□□□ -1.04
SSBP1-203ENST00000463093 GAGE2DQ9UEU5 116 aa8.56□□□□□ -1.04
SSBP1-203ENST00000463093 TMEM223A0PJW6 202 aa8.55□□□□□ -1.04
SSBP1-203ENST00000463093 INAFM2P0DMQ5 153 aa8.55□□□□□ -1.04
SSBP1-203ENST00000463093 KRTAP10-4P60372 401 aaPredicted RBP8.55□□□□□ -1.04
SSBP1-203ENST00000463093 H0Y8G0 127 aa8.54□□□□□ -1.04
SSBP1-203ENST00000463093 MAP1LC3CQ9BXW4 147 aa8.54□□□□□ -1.04
SSBP1-203ENST00000463093 RPL37AP61513 92 aaKnown RBP8.53□□□□□ -1.04
SSBP1-203ENST00000463093 C7orf33Q8WU49 177 aa8.52□□□□□ -1.05
SSBP1-203ENST00000463093 DPM2O94777 84 aa8.51□□□□□ -1.05
SSBP1-203ENST00000463093 PLNP26678 52 aa8.51□□□□□ -1.05
SSBP1-203ENST00000463093 C9orf129Q5T035 196 aaKnown RBP8.51□□□□□ -1.05
SSBP1-203ENST00000463093 FAM168BA1KXE4 195 aa8.5□□□□□ -1.05
SSBP1-203ENST00000463093 SYS1-DBNDD2H3BUS1 97 aa8.5□□□□□ -1.05
SSBP1-203ENST00000463093 KRTAP7-1Q8IUC3 87 aa8.5□□□□□ -1.05
SSBP1-203ENST00000463093 PMCHL2Q9BQD1 86 aa8.5□□□□□ -1.05
SSBP1-203ENST00000463093 SFTA2Q6UW10 78 aa8.49□□□□□ -1.05
SSBP1-203ENST00000463093 ZNF625Q96I27 306 aaPredicted RBP8.49□□□□□ -1.05
SSBP1-203ENST00000463093 XAGE1AQ9HD64 81 aa8.49□□□□□ -1.05
SSBP1-203ENST00000463093 ABCA13Q86UQ4 5058 aa8.49□□□□□ -1.05
SSBP1-203ENST00000463093 VPS13BQ7Z7G8 4022 aa8.48□□□□□ -1.05
SSBP1-203ENST00000463093 IGKCP01834 107 aa8.48□□□□□ -1.05
SSBP1-203ENST00000463093 PET117Q6UWS5 81 aa8.48□□□□□ -1.05
SSBP1-203ENST00000463093 PHF5AQ7RTV0 110 aaKnown RBP8.47□□□□□ -1.05
SSBP1-203ENST00000463093 ERG28Q9UKR5 140 aa8.47□□□□□ -1.05
SSBP1-203ENST00000463093 PFN2P35080 140 aa8.46□□□□□ -1.06
SSBP1-203ENST00000463093 COX17Q14061 63 aa8.46□□□□□ -1.06
SSBP1-203ENST00000463093 LINC01545Q5VT33 79 aa8.46□□□□□ -1.06
SSBP1-203ENST00000463093 FAM19A5Q7Z5A7 132 aaPredicted RBP8.46□□□□□ -1.06
SSBP1-203ENST00000463093 PLEKHB2Q96CS7 222 aa8.46□□□□□ -1.06
SSBP1-203ENST00000463093 SRRM2Q9UQ35 2752 aaKnown RBP8.46□□□□□ -1.06
SSBP1-203ENST00000463093 LEPROTO15243 131 aa8.45□□□□□ -1.06
SSBP1-203ENST00000463093 C3orf79P0CE67 100 aa8.45□□□□□ -1.06
SSBP1-203ENST00000463093 HNRNPA3P51991 378 aaKnown RBP8.44□□□□□ -1.06
SSBP1-203ENST00000463093 HERVK_113P61574 105 aa8.44□□□□□ -1.06
SSBP1-203ENST00000463093 PRR3P79522 188 aaKnown RBP8.44□□□□□ -1.06
SSBP1-203ENST00000463093 SERTAD4-AS1Q5TG53 156 aa8.44□□□□□ -1.06
SSBP1-203ENST00000463093 NDUFA12Q9UI09 145 aa8.44□□□□□ -1.06
SSBP1-203ENST00000463093 PLA2G2DQ9UNK4 145 aa8.44□□□□□ -1.06
SSBP1-203ENST00000463093 PCLOQ9Y6V0 5065 aa8.43□□□□□ -1.06
SSBP1-203ENST00000463093 MYMXA0A1B0GTQ4 84 aa8.43□□□□□ -1.06
SSBP1-203ENST00000463093 M0QXV9 152 aa8.43□□□□□ -1.06
SSBP1-203ENST00000463093 KRTDAPP60985 99 aa8.43□□□□□ -1.06
SSBP1-203ENST00000463093 HERV-K104P63124 156 aa8.43□□□□□ -1.06
SSBP1-203ENST00000463093 SND1-IT1Q9HBX3 110 aa8.43□□□□□ -1.06
SSBP1-203ENST00000463093 C22orf24Q9Y442 160 aa8.43□□□□□ -1.06
SSBP1-203ENST00000463093 J3QQQ9 107 aa8.42□□□□□ -1.06
SSBP1-203ENST00000463093 LINC00158P58513 81 aa8.42□□□□□ -1.06
SSBP1-203ENST00000463093 LBHQ53QV2 105 aaPredicted RBP8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms