RNA–Protein interactions for RNA: ENST00000462743.1

HPS1-206, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 3

Gene HPS1, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-206ENST00000462743 GAGE2BQ13066 116 aa7.6□□□□□ -1.19
HPS1-206ENST00000462743 PACRGQ96M98 296 aaPredicted RBP7.6□□□□□ -1.19
HPS1-206ENST00000462743 TRAV12-1A0A0B4J245 112 aa7.59□□□□□ -1.19
HPS1-206ENST00000462743 CXCL5P42830 114 aa7.59□□□□□ -1.19
HPS1-206ENST00000462743 C2orf82Q6UX34 121 aa7.59□□□□□ -1.19
HPS1-206ENST00000462743 A0A1W2PNN7 141 aa7.58□□□□□ -1.2
HPS1-206ENST00000462743 H3BRM9 83 aa7.58□□□□□ -1.2
HPS1-206ENST00000462743 HSBP1O75506 76 aa7.58□□□□□ -1.2
HPS1-206ENST00000462743 LINC00310P59036 64 aa7.58□□□□□ -1.2
HPS1-206ENST00000462743 CKS1BP61024 79 aa7.58□□□□□ -1.2
HPS1-206ENST00000462743 RPL37AP61513 92 aaKnown RBP7.58□□□□□ -1.2
HPS1-206ENST00000462743 Q6ZRP5 223 aa7.58□□□□□ -1.2
HPS1-206ENST00000462743 IFI27L1Q96BM0 104 aa7.58□□□□□ -1.2
HPS1-206ENST00000462743 TOMM7Q9P0U1 55 aa7.58□□□□□ -1.2
HPS1-206ENST00000462743 IGLV5-39A0A0G2JS06 123 aa7.57□□□□□ -1.2
HPS1-206ENST00000462743 NDUFC2-KCTD14E9PQ53 114 aa7.57□□□□□ -1.2
HPS1-206ENST00000462743 ZNF22P17026 224 aaPredicted RBP7.57□□□□□ -1.2
HPS1-206ENST00000462743 NDUFA6P56556 154 aa7.57□□□□□ -1.2
HPS1-206ENST00000462743 C9orf116Q5BN46 136 aaPredicted RBP7.57□□□□□ -1.2
HPS1-206ENST00000462743 F8VRH5 84 aa7.56□□□□□ -1.2
HPS1-206ENST00000462743 SCO1O75880 301 aa7.56□□□□□ -1.2
HPS1-206ENST00000462743 SERF1AO75920 110 aa7.56□□□□□ -1.2
HPS1-206ENST00000462743 RPL18AQ02543 176 aaKnown RBP7.56□□□□□ -1.2
HPS1-206ENST00000462743 ODF1Q14990 250 aa7.56□□□□□ -1.2
HPS1-206ENST00000462743 FAM19A2Q8N3H0 131 aa7.56□□□□□ -1.2
HPS1-206ENST00000462743 COX7B2Q8TF08 81 aa7.56□□□□□ -1.2
HPS1-206ENST00000462743 C7orf33Q8WU49 177 aa7.56□□□□□ -1.2
HPS1-206ENST00000462743 C11orf86A6NJI1 115 aa7.55□□□□□ -1.2
HPS1-206ENST00000462743 NUPR1O60356 82 aa7.55□□□□□ -1.2
HPS1-206ENST00000462743 SPINK8P0C7L1 97 aa7.55□□□□□ -1.2
HPS1-206ENST00000462743 CHTOPQ9Y3Y2 248 aaKnown RBP7.55□□□□□ -1.2
HPS1-206ENST00000462743 LEPROTL1O95214 131 aa7.54□□□□□ -1.2
HPS1-206ENST00000462743 HIST1H2BKO60814 126 aa7.53□□□□□ -1.2
HPS1-206ENST00000462743 HIST1H2BJP06899 126 aa7.53□□□□□ -1.2
HPS1-206ENST00000462743 HIST1H2BOP23527 126 aa7.53□□□□□ -1.2
HPS1-206ENST00000462743 HIST1H2BBP33778 126 aa7.53□□□□□ -1.2
HPS1-206ENST00000462743 HIST1H2BDP58876 126 aa7.53□□□□□ -1.2
HPS1-206ENST00000462743 HIST1H2BCP62807 126 aa7.53□□□□□ -1.2
HPS1-206ENST00000462743 HIST2H2BEQ16778 126 aa7.53□□□□□ -1.2
HPS1-206ENST00000462743 GAGE2EQ4V326 116 aa7.53□□□□□ -1.2
HPS1-206ENST00000462743 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.53□□□□□ -1.2
HPS1-206ENST00000462743 HIST1H2BHQ93079 126 aa7.53□□□□□ -1.2
HPS1-206ENST00000462743 HIST1H2BNQ99877 126 aa7.53□□□□□ -1.2
HPS1-206ENST00000462743 HIST1H2BMQ99879 126 aa7.53□□□□□ -1.2
HPS1-206ENST00000462743 GAGE2DQ9UEU5 116 aa7.53□□□□□ -1.2
HPS1-206ENST00000462743 DMBT1Q9UGM3 2413 aaPredicted RBP7.53□□□□□ -1.2
HPS1-206ENST00000462743 KRTAP29-1A8MX34 341 aaPredicted RBP7.51□□□□□ -1.21
HPS1-206ENST00000462743 S100A1P23297 94 aa7.51□□□□□ -1.21
HPS1-206ENST00000462743 C9orf129Q5T035 196 aaKnown RBP7.51□□□□□ -1.21
HPS1-206ENST00000462743 TMEM170BQ5T4T1 132 aa7.51□□□□□ -1.21
HPS1-206ENST00000462743 KRTAP7-1Q8IUC3 87 aa7.51□□□□□ -1.21
HPS1-206ENST00000462743 HSPB8Q9UJY1 196 aa7.51□□□□□ -1.21
HPS1-206ENST00000462743 PKHD1L1Q86WI1 4243 aa7.51□□□□□ -1.21
HPS1-206ENST00000462743 TMEM223A0PJW6 202 aa7.5□□□□□ -1.21
HPS1-206ENST00000462743 HNRNPA3P51991 378 aaKnown RBP7.5□□□□□ -1.21
HPS1-206ENST00000462743 PRR3P79522 188 aaKnown RBP7.5□□□□□ -1.21
HPS1-206ENST00000462743 SFTA2Q6UW10 78 aa7.5□□□□□ -1.21
HPS1-206ENST00000462743 FAM168BA1KXE4 195 aa7.49□□□□□ -1.21
HPS1-206ENST00000462743 OXTP01178 125 aa7.49□□□□□ -1.21
HPS1-206ENST00000462743 COA6Q5JTJ3 125 aaKnown RBP7.49□□□□□ -1.21
HPS1-206ENST00000462743 SRSF9Q13242 221 aaKnown RBP eCLIP7.48□□□□□ -1.21
HPS1-206ENST00000462743 COX17Q14061 63 aa7.48□□□□□ -1.21
HPS1-206ENST00000462743 PHF5AQ7RTV0 110 aaKnown RBP7.48□□□□□ -1.21
HPS1-206ENST00000462743 PLA2G2DQ9UNK4 145 aa7.48□□□□□ -1.21
HPS1-206ENST00000462743 TMA7Q9Y2S6 64 aaKnown RBP7.48□□□□□ -1.21
HPS1-206ENST00000462743 FABP4P15090 132 aa7.47□□□□□ -1.21
HPS1-206ENST00000462743 ZNF625Q96I27 306 aaPredicted RBP7.47□□□□□ -1.21
HPS1-206ENST00000462743 MYCBP2O75592 4640 aa7.47□□□□□ -1.21
HPS1-206ENST00000462743 XAGE1AQ9HD64 81 aa7.46□□□□□ -1.22
HPS1-206ENST00000462743 TP73-AS1Q9UF72 201 aa7.46□□□□□ -1.22
HPS1-206ENST00000462743 PSORS1C2Q9UIG4 136 aa7.46□□□□□ -1.22
HPS1-206ENST00000462743 SPINK6Q6UWN8 80 aa7.45□□□□□ -1.22
HPS1-206ENST00000462743 FAM19A5Q7Z5A7 132 aaPredicted RBP7.45□□□□□ -1.22
HPS1-206ENST00000462743 MAP1LC3CQ9BXW4 147 aa7.45□□□□□ -1.22
HPS1-206ENST00000462743 ERG28Q9UKR5 140 aa7.45□□□□□ -1.22
HPS1-206ENST00000462743 IGLV5-37A0A075B6J1 123 aa7.44□□□□□ -1.22
HPS1-206ENST00000462743 M0QXV9 152 aa7.44□□□□□ -1.22
HPS1-206ENST00000462743 DPM2O94777 84 aa7.44□□□□□ -1.22
HPS1-206ENST00000462743 PLNP26678 52 aa7.44□□□□□ -1.22
HPS1-206ENST00000462743 SERTAD4-AS1Q5TG53 156 aa7.44□□□□□ -1.22
HPS1-206ENST00000462743 KRTAP11-1Q8IUC1 163 aa7.44□□□□□ -1.22
HPS1-206ENST00000462743 C22orf24Q9Y442 160 aa7.44□□□□□ -1.22
HPS1-206ENST00000462743 LRP1Q07954 4544 aaKnown RBP7.43□□□□□ -1.22
HPS1-206ENST00000462743 ATP6V1G1O75348 118 aa7.43□□□□□ -1.22
HPS1-206ENST00000462743 LBHQ53QV2 105 aaPredicted RBP7.43□□□□□ -1.22
HPS1-206ENST00000462743 FAT3Q8TDW7 4589 aa7.43□□□□□ -1.22
HPS1-206ENST00000462743 H0Y8G0 127 aa7.42□□□□□ -1.22
HPS1-206ENST00000462743 SYS1-DBNDD2H3BUS1 97 aa7.42□□□□□ -1.22
HPS1-206ENST00000462743 IGKCP01834 107 aa7.42□□□□□ -1.22
HPS1-206ENST00000462743 HERV-K104P63124 156 aa7.42□□□□□ -1.22
HPS1-206ENST00000462743 J3QL48 77 aa7.41□□□□□ -1.22
HPS1-206ENST00000462743 LEPROTO15243 131 aa7.41□□□□□ -1.22
HPS1-206ENST00000462743 PFN2P35080 140 aa7.41□□□□□ -1.22
HPS1-206ENST00000462743 PET117Q6UWS5 81 aa7.41□□□□□ -1.22
HPS1-206ENST00000462743 PLEKHB2Q96CS7 222 aa7.41□□□□□ -1.22
HPS1-206ENST00000462743 SND1-IT1Q9HBX3 110 aa7.41□□□□□ -1.22
HPS1-206ENST00000462743 LINC00587B1AMM8 73 aa7.4□□□□□ -1.22
HPS1-206ENST00000462743 IGLV7-43P04211 117 aa7.4□□□□□ -1.22
HPS1-206ENST00000462743 C1orf137Q5JT78 98 aa7.4□□□□□ -1.22
HPS1-206ENST00000462743 LINC01545Q5VT33 79 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms