RNA–Protein interactions for RNA: ENST00000461574.1

BRCA1-206, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 726 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-206ENST00000461574 TRBV6-5A0A0K0K1A5 114 aa2.93□□□□□ -1.94
BRCA1-206ENST00000461574 A0A1B0GW15 77 aa2.93□□□□□ -1.94
BRCA1-206ENST00000461574 TLX1NBP0CAT3 122 aa2.93□□□□□ -1.94
BRCA1-206ENST00000461574 FOXA3P55318 350 aaPredicted RBP2.93□□□□□ -1.94
BRCA1-206ENST00000461574 CCL20P78556 96 aa2.93□□□□□ -1.94
BRCA1-206ENST00000461574 S100A12P80511 92 aa2.93□□□□□ -1.94
BRCA1-206ENST00000461574 C5orf47Q569G3 176 aa2.93□□□□□ -1.94
BRCA1-206ENST00000461574 UNQ6190/PRO20217Q6UXQ8 127 aa2.93□□□□□ -1.94
BRCA1-206ENST00000461574 Q6ZUT4 128 aa2.93□□□□□ -1.94
BRCA1-206ENST00000461574 LINC00304Q8N9R0 145 aa2.93□□□□□ -1.94
BRCA1-206ENST00000461574 MBD3L1Q8WWY6 194 aa2.93□□□□□ -1.94
BRCA1-206ENST00000461574 C11orf52Q96A22 123 aa2.93□□□□□ -1.94
BRCA1-206ENST00000461574 PACRGQ96M98 296 aaPredicted RBP2.93□□□□□ -1.94
BRCA1-206ENST00000461574 KIR2DL4Q99706 377 aa2.93□□□□□ -1.94
BRCA1-206ENST00000461574 RNASE7Q9H1E1 156 aaKnown RBP2.93□□□□□ -1.94
BRCA1-206ENST00000461574 MED9Q9NWA0 146 aa2.93□□□□□ -1.94
BRCA1-206ENST00000461574 C6orf48Q9UBA6 75 aa2.93□□□□□ -1.94
BRCA1-206ENST00000461574 IGKV2D-26A0A0A0MRZ7 120 aa2.92□□□□□ -1.94
BRCA1-206ENST00000461574 TGIF2-C20orf24A0A0A6YYL0 155 aa2.92□□□□□ -1.94
BRCA1-206ENST00000461574 TRBV27A0A0K0K1C4 114 aa2.92□□□□□ -1.94
BRCA1-206ENST00000461574 PDE6DO43924 150 aa2.92□□□□□ -1.94
BRCA1-206ENST00000461574 LINC00337Q8N6G1 96 aa2.92□□□□□ -1.94
BRCA1-206ENST00000461574 MAP1LC3CQ9BXW4 147 aa2.92□□□□□ -1.94
BRCA1-206ENST00000461574 PPDPFQ9H3Y8 114 aa2.92□□□□□ -1.94
BRCA1-206ENST00000461574 UBE2D4Q9Y2X8 147 aa2.92□□□□□ -1.94
BRCA1-206ENST00000461574 MUC17Q685J3 4493 aa2.91□□□□□ -1.94
BRCA1-206ENST00000461574 TRBV20OR9-2A0A075B6H5 130 aa2.91□□□□□ -1.94
BRCA1-206ENST00000461574 TRBV30A0A0K0K1B3 111 aa2.91□□□□□ -1.94
BRCA1-206ENST00000461574 LOC105371267A0A1B0GV96 52 aa2.91□□□□□ -1.94
BRCA1-206ENST00000461574 KANTRA0A1W2PQU2 76 aa2.91□□□□□ -1.94
BRCA1-206ENST00000461574 NDUFC2-KCTD14E9PQ53 114 aa2.91□□□□□ -1.94
BRCA1-206ENST00000461574 CYTL1Q9NRR1 136 aa2.91□□□□□ -1.94
BRCA1-206ENST00000461574 ANAPC11Q9NYG5 84 aa2.91□□□□□ -1.94
BRCA1-206ENST00000461574 A8MWL6 223 aa2.9□□□□□ -1.95
BRCA1-206ENST00000461574 GATCO43716 136 aaKnown RBP2.9□□□□□ -1.95
BRCA1-206ENST00000461574 BCE1O60756 84 aa2.9□□□□□ -1.95
BRCA1-206ENST00000461574 PPP1R17O96001 155 aa2.9□□□□□ -1.95
BRCA1-206ENST00000461574 UBE2AP49459 152 aa2.9□□□□□ -1.95
BRCA1-206ENST00000461574 POLR2KP53803 58 aaKnown RBP2.9□□□□□ -1.95
BRCA1-206ENST00000461574 HBBP68871 147 aa2.9□□□□□ -1.95
BRCA1-206ENST00000461574 C9orf129Q5T035 196 aaKnown RBP2.9□□□□□ -1.95
BRCA1-206ENST00000461574 LINC00242Q5T6M2 205 aa2.9□□□□□ -1.95
BRCA1-206ENST00000461574 UQCC3Q6UW78 93 aa2.9□□□□□ -1.95
BRCA1-206ENST00000461574 C2orf82Q6UX34 121 aa2.9□□□□□ -1.95
BRCA1-206ENST00000461574 MRPL55Q7Z7F7 128 aaKnown RBP2.9□□□□□ -1.95
BRCA1-206ENST00000461574 KRTAP7-1Q8IUC3 87 aa2.9□□□□□ -1.95
BRCA1-206ENST00000461574 C22orf24Q9Y442 160 aa2.9□□□□□ -1.95
BRCA1-206ENST00000461574 IGHV3OR16-9A0A0B4J2B5 98 aa2.89□□□□□ -1.95
BRCA1-206ENST00000461574 A0A1B0GUT8 65 aa2.89□□□□□ -1.95
BRCA1-206ENST00000461574 ZNF727A8MUV8 499 aa2.89□□□□□ -1.95
BRCA1-206ENST00000461574 SMKR1H3BMG3 65 aa2.89□□□□□ -1.95
BRCA1-206ENST00000461574 SMLR1H3BR10 107 aa2.89□□□□□ -1.95
BRCA1-206ENST00000461574 PPP1R2P9O14990 202 aa2.89□□□□□ -1.95
BRCA1-206ENST00000461574 SEC61BP60468 96 aaKnown RBP2.89□□□□□ -1.95
BRCA1-206ENST00000461574 CKS1BP61024 79 aa2.89□□□□□ -1.95
BRCA1-206ENST00000461574 FAM229BQ4G0N7 80 aa2.89□□□□□ -1.95
BRCA1-206ENST00000461574 Q75L30 129 aa2.89□□□□□ -1.95
BRCA1-206ENST00000461574 AMN1Q8IY45 258 aa2.89□□□□□ -1.95
BRCA1-206ENST00000461574 TIMM21Q9BVV7 248 aa2.89□□□□□ -1.95
BRCA1-206ENST00000461574 TMEM191AQ9H0A3 160 aa2.89□□□□□ -1.95
BRCA1-206ENST00000461574 XAGE1AQ9HD64 81 aa2.89□□□□□ -1.95
BRCA1-206ENST00000461574 TOMM7Q9P0U1 55 aa2.89□□□□□ -1.95
BRCA1-206ENST00000461574 PAM16Q9Y3D7 125 aa2.89□□□□□ -1.95
BRCA1-206ENST00000461574 RPL37AP8A6NKH3 93 aa2.88□□□□□ -1.95
BRCA1-206ENST00000461574 HIGD1CA8MV81 97 aa2.88□□□□□ -1.95
BRCA1-206ENST00000461574 K7EN84 100 aa2.88□□□□□ -1.95
BRCA1-206ENST00000461574 TCAPO15273 167 aa2.88□□□□□ -1.95
BRCA1-206ENST00000461574 RAB4AP20338 218 aa2.88□□□□□ -1.95
BRCA1-206ENST00000461574 RPL39P62891 51 aaKnown RBP2.88□□□□□ -1.95
BRCA1-206ENST00000461574 ZNF345Q14585 488 aa2.88□□□□□ -1.95
BRCA1-206ENST00000461574 KRTAP13-2Q52LG2 175 aa2.88□□□□□ -1.95
BRCA1-206ENST00000461574 SPANXA1Q9NS26 97 aa2.88□□□□□ -1.95
BRCA1-206ENST00000461574 IGLV5-37A0A075B6J1 123 aa2.87□□□□□ -1.95
BRCA1-206ENST00000461574 HSBP1O75506 76 aa2.87□□□□□ -1.95
BRCA1-206ENST00000461574 IFI27P40305 119 aaPredicted RBP2.87□□□□□ -1.95
BRCA1-206ENST00000461574 MRPS36P82909 103 aaKnown RBP2.87□□□□□ -1.95
BRCA1-206ENST00000461574 RIGQ13278 110 aa2.87□□□□□ -1.95
BRCA1-206ENST00000461574 ASB16-AS1Q495Z4 193 aa2.87□□□□□ -1.95
BRCA1-206ENST00000461574 FP248Q71RG6 208 aaPredicted RBP2.87□□□□□ -1.95
BRCA1-206ENST00000461574 BOD1L2Q8IYS8 172 aa2.87□□□□□ -1.95
BRCA1-206ENST00000461574 NKAPP1Q8N9T2 125 aa2.87□□□□□ -1.95
BRCA1-206ENST00000461574 TP73-AS1Q9UF72 201 aa2.87□□□□□ -1.95
BRCA1-206ENST00000461574 A0A1B0GVG6 124 aa2.86□□□□□ -1.95
BRCA1-206ENST00000461574 CFC1BP0CG36 223 aa2.86□□□□□ -1.95
BRCA1-206ENST00000461574 CKS2P33552 79 aa2.86□□□□□ -1.95
BRCA1-206ENST00000461574 KIAA0087Q14695 138 aa2.86□□□□□ -1.95
BRCA1-206ENST00000461574 COX19Q49B96 90 aa2.86□□□□□ -1.95
BRCA1-206ENST00000461574 SPAG11AQ6PDA7 123 aa2.86□□□□□ -1.95
BRCA1-206ENST00000461574 FAM231DQ6ZW35 169 aa2.86□□□□□ -1.95
BRCA1-206ENST00000461574 C2orf88Q9BSF0 95 aa2.86□□□□□ -1.95
BRCA1-206ENST00000461574 NDUFA12Q9UI09 145 aa2.86□□□□□ -1.95
BRCA1-206ENST00000461574 RAB5AP20339 215 aa2.85□□□□□ -1.95
BRCA1-206ENST00000461574 RPL32P62910 135 aaKnown RBP2.85□□□□□ -1.95
BRCA1-206ENST00000461574 PRLHP81277 87 aa2.85□□□□□ -1.95
BRCA1-206ENST00000461574 LCE3CQ5T5A8 94 aa2.85□□□□□ -1.95
BRCA1-206ENST00000461574 Q6ZN92 141 aa2.85□□□□□ -1.95
BRCA1-206ENST00000461574 TEX43Q6ZNM6 134 aa2.85□□□□□ -1.95
BRCA1-206ENST00000461574 TMEM141Q96I45 108 aa2.85□□□□□ -1.95
BRCA1-206ENST00000461574 LINC00167Q96N53 147 aa2.85□□□□□ -1.95
BRCA1-206ENST00000461574 C20orf78Q9BR46 151 aa2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms