RNA–Protein interactions for RNA: ENST00000461009.1

RAB11FIP3-207, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 2

Gene RAB11FIP3, Length 514 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-207ENST00000461009 IGLC3P0DOY3 106 aa8.42□□□□□ -1.06
RAB11FIP3-207ENST00000461009 Q8IZM0 81 aa8.42□□□□□ -1.06
RAB11FIP3-207ENST00000461009 FAM19A2Q8N3H0 131 aa8.42□□□□□ -1.06
RAB11FIP3-207ENST00000461009 SPACA4Q8TDM5 124 aa8.42□□□□□ -1.06
RAB11FIP3-207ENST00000461009 A0A087WYN8 130 aa8.41□□□□□ -1.06
RAB11FIP3-207ENST00000461009 A0A096LNI7 61 aa8.41□□□□□ -1.06
RAB11FIP3-207ENST00000461009 TRBV30A0A0K0K1B3 111 aa8.41□□□□□ -1.06
RAB11FIP3-207ENST00000461009 PANO1I0J062 215 aa8.41□□□□□ -1.06
RAB11FIP3-207ENST00000461009 GAGE2BQ13066 116 aa8.41□□□□□ -1.06
RAB11FIP3-207ENST00000461009 TRAV12-1A0A0B4J245 112 aa8.4□□□□□ -1.06
RAB11FIP3-207ENST00000461009 LEPROTL1O95214 131 aa8.4□□□□□ -1.06
RAB11FIP3-207ENST00000461009 CXCL5P42830 114 aa8.4□□□□□ -1.06
RAB11FIP3-207ENST00000461009 PTTG1IPP53801 180 aa8.4□□□□□ -1.06
RAB11FIP3-207ENST00000461009 STPG4Q8N801 248 aa8.4□□□□□ -1.06
RAB11FIP3-207ENST00000461009 CHTOPQ9Y3Y2 248 aaKnown RBP8.4□□□□□ -1.06
RAB11FIP3-207ENST00000461009 SMIM1B2RUZ4 78 aa8.39□□□□□ -1.07
RAB11FIP3-207ENST00000461009 KRTAP10-4P60372 401 aaPredicted RBP8.39□□□□□ -1.07
RAB11FIP3-207ENST00000461009 RPL18AQ02543 176 aaKnown RBP8.39□□□□□ -1.07
RAB11FIP3-207ENST00000461009 C10orf25Q5T742 122 aa8.39□□□□□ -1.07
RAB11FIP3-207ENST00000461009 COX7B2Q8TF08 81 aa8.39□□□□□ -1.07
RAB11FIP3-207ENST00000461009 C7orf33Q8WU49 177 aa8.39□□□□□ -1.07
RAB11FIP3-207ENST00000461009 PLAC8Q9NZF1 115 aa8.39□□□□□ -1.07
RAB11FIP3-207ENST00000461009 C6orf48Q9UBA6 75 aa8.39□□□□□ -1.07
RAB11FIP3-207ENST00000461009 HSPB8Q9UJY1 196 aa8.39□□□□□ -1.07
RAB11FIP3-207ENST00000461009 MYCBP2O75592 4640 aa8.38□□□□□ -1.07
RAB11FIP3-207ENST00000461009 HIST1H2BKO60814 126 aa8.38□□□□□ -1.07
RAB11FIP3-207ENST00000461009 HIST1H2BJP06899 126 aa8.38□□□□□ -1.07
RAB11FIP3-207ENST00000461009 SPINK8P0C7L1 97 aa8.38□□□□□ -1.07
RAB11FIP3-207ENST00000461009 TLX1NBP0CAT3 122 aa8.38□□□□□ -1.07
RAB11FIP3-207ENST00000461009 HIST1H2BOP23527 126 aa8.38□□□□□ -1.07
RAB11FIP3-207ENST00000461009 HIST1H2BBP33778 126 aa8.38□□□□□ -1.07
RAB11FIP3-207ENST00000461009 HIST1H2BDP58876 126 aa8.38□□□□□ -1.07
RAB11FIP3-207ENST00000461009 HIST1H2BCP62807 126 aa8.38□□□□□ -1.07
RAB11FIP3-207ENST00000461009 HIST2H2BEQ16778 126 aa8.38□□□□□ -1.07
RAB11FIP3-207ENST00000461009 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.38□□□□□ -1.07
RAB11FIP3-207ENST00000461009 TMEM170BQ5T4T1 132 aa8.38□□□□□ -1.07
RAB11FIP3-207ENST00000461009 C2orf82Q6UX34 121 aa8.38□□□□□ -1.07
RAB11FIP3-207ENST00000461009 HIST1H2BHQ93079 126 aa8.38□□□□□ -1.07
RAB11FIP3-207ENST00000461009 HIST1H2BNQ99877 126 aa8.38□□□□□ -1.07
RAB11FIP3-207ENST00000461009 HIST1H2BMQ99879 126 aa8.38□□□□□ -1.07
RAB11FIP3-207ENST00000461009 F8VRH5 84 aa8.37□□□□□ -1.07
RAB11FIP3-207ENST00000461009 ATP6V1G1O75348 118 aa8.37□□□□□ -1.07
RAB11FIP3-207ENST00000461009 ZNF22P17026 224 aaPredicted RBP8.37□□□□□ -1.07
RAB11FIP3-207ENST00000461009 LINC00310P59036 64 aa8.37□□□□□ -1.07
RAB11FIP3-207ENST00000461009 SERTAD4-AS1Q5TG53 156 aa8.37□□□□□ -1.07
RAB11FIP3-207ENST00000461009 HERC1Q15751 4861 aa8.37□□□□□ -1.07
RAB11FIP3-207ENST00000461009 C11orf86A6NJI1 115 aa8.36□□□□□ -1.07
RAB11FIP3-207ENST00000461009 NUPR1O60356 82 aa8.36□□□□□ -1.07
RAB11FIP3-207ENST00000461009 FABP4P15090 132 aa8.36□□□□□ -1.07
RAB11FIP3-207ENST00000461009 H0Y8G0 127 aa8.35□□□□□ -1.07
RAB11FIP3-207ENST00000461009 IGLV5-39A0A0G2JS06 123 aa8.34□□□□□ -1.07
RAB11FIP3-207ENST00000461009 NDUFC2-KCTD14E9PQ53 114 aa8.34□□□□□ -1.07
RAB11FIP3-207ENST00000461009 GAGE2EQ4V326 116 aa8.34□□□□□ -1.07
RAB11FIP3-207ENST00000461009 Q6ZRP5 223 aa8.34□□□□□ -1.07
RAB11FIP3-207ENST00000461009 GAGE2DQ9UEU5 116 aa8.34□□□□□ -1.07
RAB11FIP3-207ENST00000461009 C9orf116Q5BN46 136 aaPredicted RBP8.33□□□□□ -1.08
RAB11FIP3-207ENST00000461009 MAP1LC3CQ9BXW4 147 aa8.33□□□□□ -1.08
RAB11FIP3-207ENST00000461009 SFTA2Q6UW10 78 aa8.32□□□□□ -1.08
RAB11FIP3-207ENST00000461009 PLNP26678 52 aa8.31□□□□□ -1.08
RAB11FIP3-207ENST00000461009 ODF1Q14990 250 aa8.31□□□□□ -1.08
RAB11FIP3-207ENST00000461009 A0A1W2PNN7 141 aa8.3□□□□□ -1.08
RAB11FIP3-207ENST00000461009 TMEM223A0PJW6 202 aa8.3□□□□□ -1.08
RAB11FIP3-207ENST00000461009 COA6Q5JTJ3 125 aaKnown RBP8.3□□□□□ -1.08
RAB11FIP3-207ENST00000461009 HNRNPA3P51991 378 aaKnown RBP8.29□□□□□ -1.08
RAB11FIP3-207ENST00000461009 DPM2O94777 84 aa8.28□□□□□ -1.08
RAB11FIP3-207ENST00000461009 IGKCP01834 107 aa8.27□□□□□ -1.09
RAB11FIP3-207ENST00000461009 SYS1-DBNDD2H3BUS1 97 aa8.26□□□□□ -1.09
RAB11FIP3-207ENST00000461009 HERVK_113P61574 105 aa8.26□□□□□ -1.09
RAB11FIP3-207ENST00000461009 COX17Q14061 63 aa8.26□□□□□ -1.09
RAB11FIP3-207ENST00000461009 FAM19A5Q7Z5A7 132 aaPredicted RBP8.26□□□□□ -1.09
RAB11FIP3-207ENST00000461009 PFN2P35080 140 aa8.25□□□□□ -1.09
RAB11FIP3-207ENST00000461009 C9orf129Q5T035 196 aaKnown RBP8.25□□□□□ -1.09
RAB11FIP3-207ENST00000461009 PMCHL2Q9BQD1 86 aa8.25□□□□□ -1.09
RAB11FIP3-207ENST00000461009 ERG28Q9UKR5 140 aa8.25□□□□□ -1.09
RAB11FIP3-207ENST00000461009 PLA2G2DQ9UNK4 145 aa8.25□□□□□ -1.09
RAB11FIP3-207ENST00000461009 FAM168BA1KXE4 195 aa8.24□□□□□ -1.09
RAB11FIP3-207ENST00000461009 PRR3P79522 188 aaKnown RBP8.24□□□□□ -1.09
RAB11FIP3-207ENST00000461009 PET117Q6UWS5 81 aa8.24□□□□□ -1.09
RAB11FIP3-207ENST00000461009 PHF5AQ7RTV0 110 aaKnown RBP8.24□□□□□ -1.09
RAB11FIP3-207ENST00000461009 PLEKHB2Q96CS7 222 aa8.24□□□□□ -1.09
RAB11FIP3-207ENST00000461009 ZNF625Q96I27 306 aaPredicted RBP8.24□□□□□ -1.09
RAB11FIP3-207ENST00000461009 XAGE1AQ9HD64 81 aa8.24□□□□□ -1.09
RAB11FIP3-207ENST00000461009 MYMXA0A1B0GTQ4 84 aa8.23□□□□□ -1.09
RAB11FIP3-207ENST00000461009 LINC00587B1AMM8 73 aa8.23□□□□□ -1.09
RAB11FIP3-207ENST00000461009 LEPROTO15243 131 aa8.23□□□□□ -1.09
RAB11FIP3-207ENST00000461009 HERV-K104P63124 156 aa8.23□□□□□ -1.09
RAB11FIP3-207ENST00000461009 M0QXV9 152 aa8.22□□□□□ -1.09
RAB11FIP3-207ENST00000461009 S100A6P06703 90 aa8.22□□□□□ -1.09
RAB11FIP3-207ENST00000461009 LBHQ53QV2 105 aaPredicted RBP8.22□□□□□ -1.09
RAB11FIP3-207ENST00000461009 C3orf79P0CE67 100 aa8.21□□□□□ -1.1
RAB11FIP3-207ENST00000461009 LINC00158P58513 81 aa8.21□□□□□ -1.1
RAB11FIP3-207ENST00000461009 KRTDAPP60985 99 aa8.21□□□□□ -1.1
RAB11FIP3-207ENST00000461009 UBE2BP63146 152 aa8.21□□□□□ -1.1
RAB11FIP3-207ENST00000461009 LINC01545Q5VT33 79 aa8.21□□□□□ -1.1
RAB11FIP3-207ENST00000461009 REG3GQ6UW15 175 aa8.21□□□□□ -1.1
RAB11FIP3-207ENST00000461009 SPINK6Q6UWN8 80 aa8.21□□□□□ -1.1
RAB11FIP3-207ENST00000461009 NDUFA12Q9UI09 145 aa8.21□□□□□ -1.1
RAB11FIP3-207ENST00000461009 C20orf202A1L168 122 aa8.2□□□□□ -1.1
RAB11FIP3-207ENST00000461009 S100A2P29034 98 aa8.2□□□□□ -1.1
RAB11FIP3-207ENST00000461009 AKR1D1P51857 326 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 91.9 ms