RNA–Protein interactions for RNA: ENST00000460308.6

ABCD4-202, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 1 (best)

Gene ABCD4, Length 1,003 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-202ENST00000460308 SCO1O75880 301 aa13.55□□□□□ -0.24
ABCD4-202ENST00000460308 RPL37AP61513 92 aaKnown RBP13.55□□□□□ -0.24
ABCD4-202ENST00000460308 C6orf48Q9UBA6 75 aa13.55□□□□□ -0.24
ABCD4-202ENST00000460308 IGLV5-45A0A087WSX0 123 aa13.54□□□□□ -0.24
ABCD4-202ENST00000460308 C7orf33Q8WU49 177 aa13.54□□□□□ -0.24
ABCD4-202ENST00000460308 IGLC3P0DOY3 106 aa13.53□□□□□ -0.24
ABCD4-202ENST00000460308 VPS13BQ7Z7G8 4022 aa13.52□□□□□ -0.24
ABCD4-202ENST00000460308 SMIM1B2RUZ4 78 aa13.52□□□□□ -0.25
ABCD4-202ENST00000460308 FAM19A2Q8N3H0 131 aa13.52□□□□□ -0.25
ABCD4-202ENST00000460308 SPINK8P0C7L1 97 aa13.51□□□□□ -0.25
ABCD4-202ENST00000460308 TLX1NBP0CAT3 122 aa13.51□□□□□ -0.25
ABCD4-202ENST00000460308 IFI27L1Q96BM0 104 aa13.51□□□□□ -0.25
ABCD4-202ENST00000460308 SRRM2Q9UQ35 2752 aaKnown RBP13.49□□□□□ -0.25
ABCD4-202ENST00000460308 CXCL5P42830 114 aa13.49□□□□□ -0.25
ABCD4-202ENST00000460308 GAGE2EQ4V326 116 aa13.49□□□□□ -0.25
ABCD4-202ENST00000460308 COX7B2Q8TF08 81 aa13.49□□□□□ -0.25
ABCD4-202ENST00000460308 GAGE2DQ9UEU5 116 aa13.49□□□□□ -0.25
ABCD4-202ENST00000460308 SERF1AO75920 110 aa13.48□□□□□ -0.25
ABCD4-202ENST00000460308 Q6ZRP5 223 aa13.48□□□□□ -0.25
ABCD4-202ENST00000460308 CHTOPQ9Y3Y2 248 aaKnown RBP13.48□□□□□ -0.25
ABCD4-202ENST00000460308 F8VRH5 84 aa13.47□□□□□ -0.25
ABCD4-202ENST00000460308 C9orf116Q5BN46 136 aaPredicted RBP13.47□□□□□ -0.25
ABCD4-202ENST00000460308 NDUFC2-KCTD14E9PQ53 114 aa13.46□□□□□ -0.25
ABCD4-202ENST00000460308 ZNF22P17026 224 aaPredicted RBP13.46□□□□□ -0.25
ABCD4-202ENST00000460308 KRTAP10-4P60372 401 aaPredicted RBP13.46□□□□□ -0.25
ABCD4-202ENST00000460308 TRAV12-1A0A0B4J245 112 aa13.45□□□□□ -0.26
ABCD4-202ENST00000460308 A0A1W2PNN7 141 aa13.45□□□□□ -0.26
ABCD4-202ENST00000460308 LEPROTL1O95214 131 aa13.45□□□□□ -0.26
ABCD4-202ENST00000460308 TMEM170BQ5T4T1 132 aa13.45□□□□□ -0.26
ABCD4-202ENST00000460308 FLG2Q5D862 2391 aaPredicted RBP13.44□□□□□ -0.26
ABCD4-202ENST00000460308 C11orf86A6NJI1 115 aa13.43□□□□□ -0.26
ABCD4-202ENST00000460308 LINC00310P59036 64 aa13.43□□□□□ -0.26
ABCD4-202ENST00000460308 NUPR1O60356 82 aa13.41□□□□□ -0.26
ABCD4-202ENST00000460308 HSPB8Q9UJY1 196 aa13.41□□□□□ -0.26
ABCD4-202ENST00000460308 IGLV5-39A0A0G2JS06 123 aa13.4□□□□□ -0.26
ABCD4-202ENST00000460308 H0Y8G0 127 aa13.4□□□□□ -0.26
ABCD4-202ENST00000460308 FABP4P15090 132 aa13.4□□□□□ -0.26
ABCD4-202ENST00000460308 FAM168BA1KXE4 195 aa13.38□□□□□ -0.27
ABCD4-202ENST00000460308 HIST1H2BKO60814 126 aa13.38□□□□□ -0.27
ABCD4-202ENST00000460308 HIST1H2BJP06899 126 aa13.38□□□□□ -0.27
ABCD4-202ENST00000460308 HIST1H2BOP23527 126 aa13.38□□□□□ -0.27
ABCD4-202ENST00000460308 HIST1H2BBP33778 126 aa13.38□□□□□ -0.27
ABCD4-202ENST00000460308 HIST1H2BDP58876 126 aa13.38□□□□□ -0.27
ABCD4-202ENST00000460308 HIST1H2BCP62807 126 aa13.38□□□□□ -0.27
ABCD4-202ENST00000460308 HIST2H2BEQ16778 126 aa13.38□□□□□ -0.27
ABCD4-202ENST00000460308 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.38□□□□□ -0.27
ABCD4-202ENST00000460308 FAM19A5Q7Z5A7 132 aaPredicted RBP13.38□□□□□ -0.27
ABCD4-202ENST00000460308 HIST1H2BHQ93079 126 aa13.38□□□□□ -0.27
ABCD4-202ENST00000460308 HIST1H2BNQ99877 126 aa13.38□□□□□ -0.27
ABCD4-202ENST00000460308 HIST1H2BMQ99879 126 aa13.38□□□□□ -0.27
ABCD4-202ENST00000460308 S100A1P23297 94 aa13.36□□□□□ -0.27
ABCD4-202ENST00000460308 PHF5AQ7RTV0 110 aaKnown RBP13.36□□□□□ -0.27
ABCD4-202ENST00000460308 PRR3P79522 188 aaKnown RBP13.35□□□□□ -0.27
ABCD4-202ENST00000460308 C9orf129Q5T035 196 aaKnown RBP13.35□□□□□ -0.27
ABCD4-202ENST00000460308 ODF1Q14990 250 aa13.34□□□□□ -0.27
ABCD4-202ENST00000460308 XAGE1AQ9HD64 81 aa13.34□□□□□ -0.27
ABCD4-202ENST00000460308 TMEM223A0PJW6 202 aa13.33□□□□□ -0.28
ABCD4-202ENST00000460308 HNRNPA3P51991 378 aaKnown RBP13.33□□□□□ -0.28
ABCD4-202ENST00000460308 SFTA2Q6UW10 78 aa13.32□□□□□ -0.28
ABCD4-202ENST00000460308 MAP1LC3CQ9BXW4 147 aa13.32□□□□□ -0.28
ABCD4-202ENST00000460308 M0QXV9 152 aa13.31□□□□□ -0.28
ABCD4-202ENST00000460308 PFN2P35080 140 aa13.3□□□□□ -0.28
ABCD4-202ENST00000460308 J3QL48 77 aa13.29□□□□□ -0.28
ABCD4-202ENST00000460308 ATP6V1G1O75348 118 aa13.29□□□□□ -0.28
ABCD4-202ENST00000460308 PLNP26678 52 aa13.29□□□□□ -0.28
ABCD4-202ENST00000460308 UBE2BP63146 152 aa13.28□□□□□ -0.28
ABCD4-202ENST00000460308 KRTAP7-1Q8IUC3 87 aa13.28□□□□□ -0.28
ABCD4-202ENST00000460308 ZNF625Q96I27 306 aaPredicted RBP13.28□□□□□ -0.28
ABCD4-202ENST00000460308 ERG28Q9UKR5 140 aa13.28□□□□□ -0.28
ABCD4-202ENST00000460308 DPM2O94777 84 aa13.27□□□□□ -0.29
ABCD4-202ENST00000460308 PSORS1C2Q9UIG4 136 aa13.27□□□□□ -0.29
ABCD4-202ENST00000460308 KRTAP29-1A8MX34 341 aaPredicted RBP13.26□□□□□ -0.29
ABCD4-202ENST00000460308 COX17Q14061 63 aa13.26□□□□□ -0.29
ABCD4-202ENST00000460308 SERTAD4-AS1Q5TG53 156 aa13.26□□□□□ -0.29
ABCD4-202ENST00000460308 OXTP01178 125 aa13.25□□□□□ -0.29
ABCD4-202ENST00000460308 IGKCP01834 107 aa13.25□□□□□ -0.29
ABCD4-202ENST00000460308 C1orf137Q5JT78 98 aa13.25□□□□□ -0.29
ABCD4-202ENST00000460308 PMCHL2Q9BQD1 86 aa13.25□□□□□ -0.29
ABCD4-202ENST00000460308 C22orf24Q9Y442 160 aa13.25□□□□□ -0.29
ABCD4-202ENST00000460308 LBHQ53QV2 105 aaPredicted RBP13.24□□□□□ -0.29
ABCD4-202ENST00000460308 MYCBP2O75592 4640 aa13.24□□□□□ -0.29
ABCD4-202ENST00000460308 HERVK_113P61574 105 aa13.23□□□□□ -0.29
ABCD4-202ENST00000460308 PKHD1L1Q86WI1 4243 aa13.22□□□□□ -0.29
ABCD4-202ENST00000460308 DMBT1Q9UGM3 2413 aaPredicted RBP13.22□□□□□ -0.29
ABCD4-202ENST00000460308 COA6Q5JTJ3 125 aaKnown RBP13.22□□□□□ -0.29
ABCD4-202ENST00000460308 SPINK6Q6UWN8 80 aa13.22□□□□□ -0.29
ABCD4-202ENST00000460308 LINC00158P58513 81 aa13.21□□□□□ -0.29
ABCD4-202ENST00000460308 PLA2G2DQ9UNK4 145 aa13.21□□□□□ -0.29
ABCD4-202ENST00000460308 SYS1-DBNDD2H3BUS1 97 aa13.2□□□□□ -0.3
ABCD4-202ENST00000460308 LEPROTO15243 131 aa13.2□□□□□ -0.3
ABCD4-202ENST00000460308 PLEKHB2Q96CS7 222 aa13.2□□□□□ -0.3
ABCD4-202ENST00000460308 TP73-AS1Q9UF72 201 aa13.2□□□□□ -0.3
ABCD4-202ENST00000460308 NDUFA12Q9UI09 145 aa13.2□□□□□ -0.3
ABCD4-202ENST00000460308 MYMXA0A1B0GTQ4 84 aa13.19□□□□□ -0.3
ABCD4-202ENST00000460308 HERV-K104P63124 156 aa13.19□□□□□ -0.3
ABCD4-202ENST00000460308 MRPL55Q7Z7F7 128 aaKnown RBP13.19□□□□□ -0.3
ABCD4-202ENST00000460308 KRTAP11-1Q8IUC1 163 aa13.19□□□□□ -0.3
ABCD4-202ENST00000460308 SND1-IT1Q9HBX3 110 aa13.19□□□□□ -0.3
ABCD4-202ENST00000460308 SRSF9Q13242 221 aaKnown RBP eCLIP13.18□□□□□ -0.3
ABCD4-202ENST00000460308 MEIG1Q5JSS6 88 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 132.8 ms