RNA–Protein interactions for RNA: ENST00000453854.1

HMGB1P15-201, Transcript of high mobility group box 1 pseudogene 15, humanhuman

BASIC

Gene HMGB1P15, Length 435 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P15-201ENST00000453854 SPTBP11277 2137 aa1.94□□□□□ -2.1
HMGB1P15-201ENST00000453854 DNAJC13O75165 2243 aa1.93□□□□□ -2.1
HMGB1P15-201ENST00000453854 A0A0G2JQZ4 141 aa1.93□□□□□ -2.1
HMGB1P15-201ENST00000453854 IGHV3-33P01772 117 aa1.93□□□□□ -2.1
HMGB1P15-201ENST00000453854 IQCJQ1A5X6 159 aa1.93□□□□□ -2.1
HMGB1P15-201ENST00000453854 Q1T7F1 81 aa1.93□□□□□ -2.1
HMGB1P15-201ENST00000453854 PATE1Q8WXA2 126 aa1.93□□□□□ -2.1
HMGB1P15-201ENST00000453854 MPDZO75970 2070 aa1.93□□□□□ -2.1
HMGB1P15-201ENST00000453854 FREM1Q5H8C1 2179 aa1.93□□□□□ -2.1
HMGB1P15-201ENST00000453854 MED12LQ86YW9 2145 aa1.93□□□□□ -2.1
HMGB1P15-201ENST00000453854 DNAH1Q9P2D7 4330 aa1.93□□□□□ -2.1
HMGB1P15-201ENST00000453854 IGKV1D-17A0A075B6S4 117 aa1.92□□□□□ -2.1
HMGB1P15-201ENST00000453854 UBE2L5PA0A1B0GUS4 154 aa1.92□□□□□ -2.1
HMGB1P15-201ENST00000453854 IGKV1-17P01599 117 aa1.92□□□□□ -2.1
HMGB1P15-201ENST00000453854 UQCRHP07919 91 aa1.92□□□□□ -2.1
HMGB1P15-201ENST00000453854 P0C880 135 aa1.92□□□□□ -2.1
HMGB1P15-201ENST00000453854 COX7CP15954 63 aa1.92□□□□□ -2.1
HMGB1P15-201ENST00000453854 POLR2JP52435 117 aaKnown RBP1.92□□□□□ -2.1
HMGB1P15-201ENST00000453854 UBA52P62987 128 aaKnown RBP1.92□□□□□ -2.1
HMGB1P15-201ENST00000453854 UBE2L3P68036 154 aaKnown RBP1.92□□□□□ -2.1
HMGB1P15-201ENST00000453854 DCDP81605 110 aaKnown RBP1.92□□□□□ -2.1
HMGB1P15-201ENST00000453854 C5orf38Q86SI9 138 aa1.92□□□□□ -2.1
HMGB1P15-201ENST00000453854 NDUFA11Q86Y39 141 aa1.92□□□□□ -2.1
HMGB1P15-201ENST00000453854 SBSPONQ8IVN8 264 aa1.92□□□□□ -2.1
HMGB1P15-201ENST00000453854 CLECL1Q8IZS7 167 aa1.92□□□□□ -2.1
HMGB1P15-201ENST00000453854 Q8N8P6 123 aa1.92□□□□□ -2.1
HMGB1P15-201ENST00000453854 TMEM141Q96I45 108 aa1.92□□□□□ -2.1
HMGB1P15-201ENST00000453854 TMEM106BQ9NUM4 274 aa1.92□□□□□ -2.1
HMGB1P15-201ENST00000453854 ORMDL1Q9P0S3 153 aa1.92□□□□□ -2.1
HMGB1P15-201ENST00000453854 NDUFA12Q9UI09 145 aa1.92□□□□□ -2.1
HMGB1P15-201ENST00000453854 COL7A1Q02388 2944 aa1.92□□□□□ -2.1
HMGB1P15-201ENST00000453854 SNRNP200O75643 2136 aaKnown RBP1.91□□□□□ -2.1
HMGB1P15-201ENST00000453854 HEATR1Q9H583 2144 aaKnown RBP1.91□□□□□ -2.1
HMGB1P15-201ENST00000453854 CSMD3Q7Z407 3707 aa1.91□□□□□ -2.1
HMGB1P15-201ENST00000453854 A0A1W2PNN7 141 aa1.91□□□□□ -2.1
HMGB1P15-201ENST00000453854 CNBPP62633 177 aaKnown RBP1.91□□□□□ -2.1
HMGB1P15-201ENST00000453854 TFF3Q07654 80 aa1.91□□□□□ -2.1
HMGB1P15-201ENST00000453854 RHOHQ15669 191 aa1.91□□□□□ -2.1
HMGB1P15-201ENST00000453854 TPRXLQ17RH7 258 aa1.91□□□□□ -2.1
HMGB1P15-201ENST00000453854 SLC48A1Q6P1K1 146 aa1.91□□□□□ -2.1
HMGB1P15-201ENST00000453854 LINC00299Q6ZSB3 139 aa1.91□□□□□ -2.1
HMGB1P15-201ENST00000453854 LINC00052Q96N35 136 aa1.91□□□□□ -2.1
HMGB1P15-201ENST00000453854 DSCR8Q96T75 97 aa1.91□□□□□ -2.1
HMGB1P15-201ENST00000453854 DNAH9Q9NYC9 4486 aa1.91□□□□□ -2.1
HMGB1P15-201ENST00000453854 TENM3Q9P273 2699 aa1.91□□□□□ -2.1
HMGB1P15-201ENST00000453854 KIAA1109Q2LD37 5005 aa1.91□□□□□ -2.1
HMGB1P15-201ENST00000453854 HERC1Q15751 4861 aa1.9□□□□□ -2.11
HMGB1P15-201ENST00000453854 FRAS1Q86XX4 4008 aa1.9□□□□□ -2.11
HMGB1P15-201ENST00000453854 CBLN1P23435 193 aa1.9□□□□□ -2.11
HMGB1P15-201ENST00000453854 SPACA4Q8TDM5 124 aa1.9□□□□□ -2.11
HMGB1P15-201ENST00000453854 C10orf105Q8TEF2 133 aa1.9□□□□□ -2.11
HMGB1P15-201ENST00000453854 LYSTQ99698 3801 aa1.9□□□□□ -2.11
HMGB1P15-201ENST00000453854 CCL19Q99731 98 aa1.9□□□□□ -2.11
HMGB1P15-201ENST00000453854 TENM2Q9NT68 2774 aa1.9□□□□□ -2.11
HMGB1P15-201ENST00000453854 MED12Q93074 2177 aa1.89□□□□□ -2.11
HMGB1P15-201ENST00000453854 TRAV17A0A0B4J275 112 aa1.89□□□□□ -2.11
HMGB1P15-201ENST00000453854 F8W1H4 67 aa1.89□□□□□ -2.11
HMGB1P15-201ENST00000453854 PIN1P1O15428 100 aa1.89□□□□□ -2.11
HMGB1P15-201ENST00000453854 STATHP02808 62 aa1.89□□□□□ -2.11
HMGB1P15-201ENST00000453854 C6orf52Q5T4I8 152 aa1.89□□□□□ -2.11
HMGB1P15-201ENST00000453854 RPL7L1Q6DKI1 246 aaKnown RBP1.89□□□□□ -2.11
HMGB1P15-201ENST00000453854 UNQ5815/PRO19632Q6UWF5 114 aa1.89□□□□□ -2.11
HMGB1P15-201ENST00000453854 COMMD6Q7Z4G1 85 aa1.89□□□□□ -2.11
HMGB1P15-201ENST00000453854 C4orf33Q8N1A6 199 aa1.89□□□□□ -2.11
HMGB1P15-201ENST00000453854 LINC00304Q8N9R0 145 aa1.89□□□□□ -2.11
HMGB1P15-201ENST00000453854 VAMP8Q9BV40 100 aa1.89□□□□□ -2.11
HMGB1P15-201ENST00000453854 ATG5Q9H1Y0 275 aa1.89□□□□□ -2.11
HMGB1P15-201ENST00000453854 DPH3P1Q9H4G8 78 aa1.89□□□□□ -2.11
HMGB1P15-201ENST00000453854 EXPH5Q8NEV8 1989 aa1.89□□□□□ -2.11
HMGB1P15-201ENST00000453854 PLECQ15149 4684 aaKnown RBP1.88□□□□□ -2.11
HMGB1P15-201ENST00000453854 STARD9Q9P2P6 4700 aa1.88□□□□□ -2.11
HMGB1P15-201ENST00000453854 TRBV10-1A0A0K0K1A3 114 aa1.88□□□□□ -2.11
HMGB1P15-201ENST00000453854 TRBV10-3A0A0K0K1G6 114 aa1.88□□□□□ -2.11
HMGB1P15-201ENST00000453854 TMEM30CPA0ZSE6 113 aa1.88□□□□□ -2.11
HMGB1P15-201ENST00000453854 A6NIN4 97 aa1.88□□□□□ -2.11
HMGB1P15-201ENST00000453854 H3BRN7 92 aa1.88□□□□□ -2.11
HMGB1P15-201ENST00000453854 Q0VG73 95 aa1.88□□□□□ -2.11
HMGB1P15-201ENST00000453854 INSL4Q14641 139 aa1.88□□□□□ -2.11
HMGB1P15-201ENST00000453854 C9orf116Q5BN46 136 aaPredicted RBP1.88□□□□□ -2.11
HMGB1P15-201ENST00000453854 FAM74A1Q5RGS3 127 aa1.88□□□□□ -2.11
HMGB1P15-201ENST00000453854 LCN9Q8WX39 176 aa1.88□□□□□ -2.11
HMGB1P15-201ENST00000453854 C22orf24Q9Y442 160 aa1.88□□□□□ -2.11
HMGB1P15-201ENST00000453854 LINC00312Q9Y6C7 94 aa1.88□□□□□ -2.11
HMGB1P15-201ENST00000453854 TRGV4A0A0C4DH28 118 aa1.87□□□□□ -2.11
HMGB1P15-201ENST00000453854 A0A0J9YY99 117 aa1.87□□□□□ -2.11
HMGB1P15-201ENST00000453854 CXorf51AA0A1B0GTR3 108 aa1.87□□□□□ -2.11
HMGB1P15-201ENST00000453854 RBAKDNA6NC62 111 aa1.87□□□□□ -2.11
HMGB1P15-201ENST00000453854 H3BRM9 83 aa1.87□□□□□ -2.11
HMGB1P15-201ENST00000453854 SPRNQ5BIV9 151 aa1.87□□□□□ -2.11
HMGB1P15-201ENST00000453854 C10orf55Q5SWW7 151 aa1.87□□□□□ -2.11
HMGB1P15-201ENST00000453854 DMAC1Q96GE9 116 aa1.87□□□□□ -2.11
HMGB1P15-201ENST00000453854 MRPL35Q9NZE8 188 aaKnown RBP1.87□□□□□ -2.11
HMGB1P15-201ENST00000453854 ARFGEF3Q5TH69 2177 aa1.86□□□□□ -2.11
HMGB1P15-201ENST00000453854 TRBV6-8A0A0A6YYG3 113 aa1.86□□□□□ -2.11
HMGB1P15-201ENST00000453854 TRBV6-4A0A1B0GX49 114 aa1.86□□□□□ -2.11
HMGB1P15-201ENST00000453854 IGLC1P0CG04 106 aa1.86□□□□□ -2.11
HMGB1P15-201ENST00000453854 SLC25A6P12236 298 aa1.86□□□□□ -2.11
HMGB1P15-201ENST00000453854 HCP5Q6MZN7 132 aa1.86□□□□□ -2.11
HMGB1P15-201ENST00000453854 LYPD5Q6UWN5 251 aa1.86□□□□□ -2.11
HMGB1P15-201ENST00000453854 C15orf53Q8NAA6 179 aa1.86□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms