RNA–Protein interactions for RNA: ENST00000451542.5

SMPD4-212, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 796 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-212ENST00000451542 IFI27L1Q96BM0 104 aa7.63□□□□□ -1.19
SMPD4-212ENST00000451542 C6orf48Q9UBA6 75 aa7.63□□□□□ -1.19
SMPD4-212ENST00000451542 F8VRH5 84 aa7.62□□□□□ -1.19
SMPD4-212ENST00000451542 C10orf25Q5T742 122 aa7.62□□□□□ -1.19
SMPD4-212ENST00000451542 C2orf82Q6UX34 121 aa7.62□□□□□ -1.19
SMPD4-212ENST00000451542 COX7B2Q8TF08 81 aa7.62□□□□□ -1.19
SMPD4-212ENST00000451542 CHTOPQ9Y3Y2 248 aaKnown RBP7.62□□□□□ -1.19
SMPD4-212ENST00000451542 SMIM1B2RUZ4 78 aa7.61□□□□□ -1.19
SMPD4-212ENST00000451542 NDUFC2-KCTD14E9PQ53 114 aa7.61□□□□□ -1.19
SMPD4-212ENST00000451542 LEPROTL1O95214 131 aa7.61□□□□□ -1.19
SMPD4-212ENST00000451542 TRAV12-1A0A0B4J245 112 aa7.6□□□□□ -1.19
SMPD4-212ENST00000451542 SERF1AO75920 110 aa7.6□□□□□ -1.19
SMPD4-212ENST00000451542 SPINK8P0C7L1 97 aa7.6□□□□□ -1.19
SMPD4-212ENST00000451542 GAGE2EQ4V326 116 aa7.6□□□□□ -1.19
SMPD4-212ENST00000451542 TMEM170BQ5T4T1 132 aa7.6□□□□□ -1.19
SMPD4-212ENST00000451542 GAGE2DQ9UEU5 116 aa7.6□□□□□ -1.19
SMPD4-212ENST00000451542 HSPB8Q9UJY1 196 aa7.6□□□□□ -1.19
SMPD4-212ENST00000451542 C9orf116Q5BN46 136 aaPredicted RBP7.59□□□□□ -1.19
SMPD4-212ENST00000451542 SFTA2Q6UW10 78 aa7.59□□□□□ -1.19
SMPD4-212ENST00000451542 Q6ZRP5 223 aa7.59□□□□□ -1.19
SMPD4-212ENST00000451542 FAM19A2Q8N3H0 131 aa7.59□□□□□ -1.19
SMPD4-212ENST00000451542 SCO1O75880 301 aa7.58□□□□□ -1.2
SMPD4-212ENST00000451542 ZNF22P17026 224 aaPredicted RBP7.58□□□□□ -1.2
SMPD4-212ENST00000451542 C11orf86A6NJI1 115 aa7.57□□□□□ -1.2
SMPD4-212ENST00000451542 S100A1P23297 94 aa7.57□□□□□ -1.2
SMPD4-212ENST00000451542 DNAH8Q96JB1 4490 aa7.55□□□□□ -1.2
SMPD4-212ENST00000451542 IGLV5-39A0A0G2JS06 123 aa7.55□□□□□ -1.2
SMPD4-212ENST00000451542 A0A1W2PNN7 141 aa7.55□□□□□ -1.2
SMPD4-212ENST00000451542 H0Y8G0 127 aa7.55□□□□□ -1.2
SMPD4-212ENST00000451542 FLG2Q5D862 2391 aaPredicted RBP7.55□□□□□ -1.2
SMPD4-212ENST00000451542 HIST1H2BKO60814 126 aa7.54□□□□□ -1.2
SMPD4-212ENST00000451542 HIST1H2BJP06899 126 aa7.54□□□□□ -1.2
SMPD4-212ENST00000451542 FABP4P15090 132 aa7.54□□□□□ -1.2
SMPD4-212ENST00000451542 HIST1H2BOP23527 126 aa7.54□□□□□ -1.2
SMPD4-212ENST00000451542 HIST1H2BBP33778 126 aa7.54□□□□□ -1.2
SMPD4-212ENST00000451542 HIST1H2BDP58876 126 aa7.54□□□□□ -1.2
SMPD4-212ENST00000451542 HIST1H2BCP62807 126 aa7.54□□□□□ -1.2
SMPD4-212ENST00000451542 HIST2H2BEQ16778 126 aa7.54□□□□□ -1.2
SMPD4-212ENST00000451542 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.54□□□□□ -1.2
SMPD4-212ENST00000451542 HIST1H2BHQ93079 126 aa7.54□□□□□ -1.2
SMPD4-212ENST00000451542 HIST1H2BNQ99877 126 aa7.54□□□□□ -1.2
SMPD4-212ENST00000451542 HIST1H2BMQ99879 126 aa7.54□□□□□ -1.2
SMPD4-212ENST00000451542 MAP1LC3CQ9BXW4 147 aa7.54□□□□□ -1.2
SMPD4-212ENST00000451542 J3QL48 77 aa7.53□□□□□ -1.2
SMPD4-212ENST00000451542 PLNP26678 52 aa7.53□□□□□ -1.2
SMPD4-212ENST00000451542 KRTAP10-4P60372 401 aaPredicted RBP7.53□□□□□ -1.2
SMPD4-212ENST00000451542 PRR3P79522 188 aaKnown RBP7.53□□□□□ -1.2
SMPD4-212ENST00000451542 FAM19A5Q7Z5A7 132 aaPredicted RBP7.53□□□□□ -1.2
SMPD4-212ENST00000451542 M0QXV9 152 aa7.52□□□□□ -1.21
SMPD4-212ENST00000451542 LINC00310P59036 64 aa7.52□□□□□ -1.21
SMPD4-212ENST00000451542 UBE2BP63146 152 aa7.52□□□□□ -1.21
SMPD4-212ENST00000451542 COX17Q14061 63 aa7.52□□□□□ -1.21
SMPD4-212ENST00000451542 LBHQ53QV2 105 aaPredicted RBP7.52□□□□□ -1.21
SMPD4-212ENST00000451542 XAGE1AQ9HD64 81 aa7.52□□□□□ -1.21
SMPD4-212ENST00000451542 FAT1Q14517 4588 aa7.52□□□□□ -1.21
SMPD4-212ENST00000451542 TMEM223A0PJW6 202 aa7.51□□□□□ -1.21
SMPD4-212ENST00000451542 HERVK_113P61574 105 aa7.51□□□□□ -1.21
SMPD4-212ENST00000451542 ODF1Q14990 250 aa7.51□□□□□ -1.21
SMPD4-212ENST00000451542 C9orf129Q5T035 196 aaKnown RBP7.51□□□□□ -1.21
SMPD4-212ENST00000451542 PHF5AQ7RTV0 110 aaKnown RBP7.51□□□□□ -1.21
SMPD4-212ENST00000451542 FAM168BA1KXE4 195 aa7.5□□□□□ -1.21
SMPD4-212ENST00000451542 LINC00587B1AMM8 73 aa7.5□□□□□ -1.21
SMPD4-212ENST00000451542 NUPR1O60356 82 aa7.5□□□□□ -1.21
SMPD4-212ENST00000451542 ATP6V1G1O75348 118 aa7.5□□□□□ -1.21
SMPD4-212ENST00000451542 DPM2O94777 84 aa7.5□□□□□ -1.21
SMPD4-212ENST00000451542 OXTP01178 125 aa7.5□□□□□ -1.21
SMPD4-212ENST00000451542 PFN2P35080 140 aa7.5□□□□□ -1.21
SMPD4-212ENST00000451542 ERG28Q9UKR5 140 aa7.5□□□□□ -1.21
SMPD4-212ENST00000451542 KRTAP29-1A8MX34 341 aaPredicted RBP7.49□□□□□ -1.21
SMPD4-212ENST00000451542 IGKCP01834 107 aa7.48□□□□□ -1.21
SMPD4-212ENST00000451542 HERV-K104P63124 156 aa7.48□□□□□ -1.21
SMPD4-212ENST00000451542 C1orf137Q5JT78 98 aa7.48□□□□□ -1.21
SMPD4-212ENST00000451542 SPINK6Q6UWN8 80 aa7.48□□□□□ -1.21
SMPD4-212ENST00000451542 NKAPP1Q8N9T2 125 aa7.48□□□□□ -1.21
SMPD4-212ENST00000451542 PLEKHB2Q96CS7 222 aa7.48□□□□□ -1.21
SMPD4-212ENST00000451542 ZNF625Q96I27 306 aaPredicted RBP7.48□□□□□ -1.21
SMPD4-212ENST00000451542 TP73-AS1Q9UF72 201 aa7.48□□□□□ -1.21
SMPD4-212ENST00000451542 PSORS1C2Q9UIG4 136 aa7.48□□□□□ -1.21
SMPD4-212ENST00000451542 SRRM2Q9UQ35 2752 aaKnown RBP7.48□□□□□ -1.21
SMPD4-212ENST00000451542 MYMXA0A1B0GTQ4 84 aa7.47□□□□□ -1.21
SMPD4-212ENST00000451542 PLA2G2DQ9UNK4 145 aa7.47□□□□□ -1.21
SMPD4-212ENST00000451542 C22orf24Q9Y442 160 aa7.47□□□□□ -1.21
SMPD4-212ENST00000451542 ABCA13Q86UQ4 5058 aa7.47□□□□□ -1.21
SMPD4-212ENST00000451542 LINC00158P58513 81 aa7.46□□□□□ -1.22
SMPD4-212ENST00000451542 RPL24P83731 157 aaKnown RBP7.46□□□□□ -1.22
SMPD4-212ENST00000451542 MEIG1Q5JSS6 88 aa7.46□□□□□ -1.22
SMPD4-212ENST00000451542 COA6Q5JTJ3 125 aaKnown RBP7.46□□□□□ -1.22
SMPD4-212ENST00000451542 REG3GQ6UW15 175 aa7.46□□□□□ -1.22
SMPD4-212ENST00000451542 MRPL55Q7Z7F7 128 aaKnown RBP7.46□□□□□ -1.22
SMPD4-212ENST00000451542 DMBT1Q9UGM3 2413 aaPredicted RBP7.45□□□□□ -1.22
SMPD4-212ENST00000451542 SYS1-DBNDD2H3BUS1 97 aa7.45□□□□□ -1.22
SMPD4-212ENST00000451542 LEPROTO15243 131 aa7.45□□□□□ -1.22
SMPD4-212ENST00000451542 LGALS3P17931 250 aaKnown RBP7.45□□□□□ -1.22
SMPD4-212ENST00000451542 HNRNPA3P51991 378 aaKnown RBP7.45□□□□□ -1.22
SMPD4-212ENST00000451542 SERTAD4-AS1Q5TG53 156 aa7.45□□□□□ -1.22
SMPD4-212ENST00000451542 PET117Q6UWS5 81 aa7.45□□□□□ -1.22
SMPD4-212ENST00000451542 NDUFA12Q9UI09 145 aa7.45□□□□□ -1.22
SMPD4-212ENST00000451542 PCLOQ9Y6V0 5065 aa7.44□□□□□ -1.22
SMPD4-212ENST00000451542 SND1-IT1Q9HBX3 110 aa7.44□□□□□ -1.22
SMPD4-212ENST00000451542 C20orf202A1L168 122 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 121.4 ms