RNA–Protein interactions for RNA: ENST00000445623.1

TIMP1-204, Transcript of TIMP metallopeptidase inhibitor 1, humanhuman

TSL 2

Gene TIMP1, Length 595 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1-204ENST00000445623 SLPIP03973 132 aa8.55□□□□□ -1.04
TIMP1-204ENST00000445623 GCSHP23434 173 aa8.55□□□□□ -1.04
TIMP1-204ENST00000445623 RNF151Q2KHN1 245 aa8.55□□□□□ -1.04
TIMP1-204ENST00000445623 Q6ZRU5 148 aa8.55□□□□□ -1.04
TIMP1-204ENST00000445623 HSBP1L1C9JCN9 74 aa8.54□□□□□ -1.04
TIMP1-204ENST00000445623 E9PLD3 99 aa8.54□□□□□ -1.04
TIMP1-204ENST00000445623 FUSP35637 526 aaKnown RBP eCLIP8.54□□□□□ -1.04
TIMP1-204ENST00000445623 C2orf82Q6UX34 121 aa8.54□□□□□ -1.04
TIMP1-204ENST00000445623 UNQ6190/PRO20217Q6UXQ8 127 aa8.54□□□□□ -1.04
TIMP1-204ENST00000445623 LGALS3P17931 250 aaKnown RBP8.53□□□□□ -1.04
TIMP1-204ENST00000445623 ATOH7Q8N100 152 aa8.53□□□□□ -1.04
TIMP1-204ENST00000445623 STPG4Q8N801 248 aa8.53□□□□□ -1.04
TIMP1-204ENST00000445623 J3QQQ9 107 aa8.52□□□□□ -1.05
TIMP1-204ENST00000445623 NMUP48645 174 aa8.52□□□□□ -1.05
TIMP1-204ENST00000445623 C10orf25Q5T742 122 aa8.52□□□□□ -1.05
TIMP1-204ENST00000445623 PKD1P98161 4303 aa8.52□□□□□ -1.05
TIMP1-204ENST00000445623 DNAH11Q96DT5 4516 aa8.51□□□□□ -1.05
TIMP1-204ENST00000445623 LOC107984640A0A0U1RRK4 108 aa8.51□□□□□ -1.05
TIMP1-204ENST00000445623 MYMXA0A1B0GTQ4 84 aa8.51□□□□□ -1.05
TIMP1-204ENST00000445623 JOSD1Q15040 202 aaPredicted RBP8.51□□□□□ -1.05
TIMP1-204ENST00000445623 C6orf48Q9UBA6 75 aa8.51□□□□□ -1.05
TIMP1-204ENST00000445623 NDUFA12Q9UI09 145 aa8.51□□□□□ -1.05
TIMP1-204ENST00000445623 HECTD4Q9Y4D8 3996 aa8.51□□□□□ -1.05
TIMP1-204ENST00000445623 HERV-K104P63124 156 aa8.5□□□□□ -1.05
TIMP1-204ENST00000445623 LINC00587B1AMM8 73 aa8.49□□□□□ -1.05
TIMP1-204ENST00000445623 LINC01620Q4KN68 170 aa8.49□□□□□ -1.05
TIMP1-204ENST00000445623 ZNF625Q96I27 306 aaPredicted RBP8.49□□□□□ -1.05
TIMP1-204ENST00000445623 TLX1NBP0CAT3 122 aa8.48□□□□□ -1.05
TIMP1-204ENST00000445623 TSPEAR-AS2P59090 65 aa8.48□□□□□ -1.05
TIMP1-204ENST00000445623 RPL18AQ02543 176 aaKnown RBP8.48□□□□□ -1.05
TIMP1-204ENST00000445623 SDIM1Q6ZPB5 146 aa8.48□□□□□ -1.05
TIMP1-204ENST00000445623 LINC00474Q9P2X8 69 aa8.48□□□□□ -1.05
TIMP1-204ENST00000445623 NDUFC2-KCTD14E9PQ53 114 aa8.47□□□□□ -1.05
TIMP1-204ENST00000445623 COX17Q14061 63 aa8.47□□□□□ -1.05
TIMP1-204ENST00000445623 ANKRD39Q53RE8 183 aa8.47□□□□□ -1.05
TIMP1-204ENST00000445623 MEIG1Q5JSS6 88 aa8.47□□□□□ -1.05
TIMP1-204ENST00000445623 ERG28Q9UKR5 140 aa8.47□□□□□ -1.05
TIMP1-204ENST00000445623 KRTAP10-1P60331 282 aa8.46□□□□□ -1.06
TIMP1-204ENST00000445623 GAGE2BQ13066 116 aa8.46□□□□□ -1.06
TIMP1-204ENST00000445623 C9orf116Q5BN46 136 aaPredicted RBP8.46□□□□□ -1.06
TIMP1-204ENST00000445623 IGKV2D-26A0A0A0MRZ7 120 aa8.45□□□□□ -1.06
TIMP1-204ENST00000445623 ZNF815PA8K554 130 aa8.45□□□□□ -1.06
TIMP1-204ENST00000445623 PFN2P35080 140 aa8.45□□□□□ -1.06
TIMP1-204ENST00000445623 PTTG1IPP53801 180 aa8.45□□□□□ -1.06
TIMP1-204ENST00000445623 MAJINQ3KP22 176 aa8.45□□□□□ -1.06
TIMP1-204ENST00000445623 VAMP8Q9BV40 100 aa8.45□□□□□ -1.06
TIMP1-204ENST00000445623 DNAH5Q8TE73 4624 aa8.45□□□□□ -1.06
TIMP1-204ENST00000445623 A0A096LNI7 61 aa8.44□□□□□ -1.06
TIMP1-204ENST00000445623 IGKV2-24A0A0C4DH68 120 aa8.44□□□□□ -1.06
TIMP1-204ENST00000445623 PYY3Q5JQD4 70 aa8.44□□□□□ -1.06
TIMP1-204ENST00000445623 Q6ZRP5 223 aa8.44□□□□□ -1.06
TIMP1-204ENST00000445623 LINC00158P58513 81 aa8.43□□□□□ -1.06
TIMP1-204ENST00000445623 CIRBPQ14011 172 aaKnown RBP8.43□□□□□ -1.06
TIMP1-204ENST00000445623 GAGE2EQ4V326 116 aa8.43□□□□□ -1.06
TIMP1-204ENST00000445623 DPH3Q96FX2 82 aa8.43□□□□□ -1.06
TIMP1-204ENST00000445623 GAGE2DQ9UEU5 116 aa8.43□□□□□ -1.06
TIMP1-204ENST00000445623 Q6ZSA8 131 aa8.42□□□□□ -1.06
TIMP1-204ENST00000445623 PAM16Q9Y3D7 125 aa8.42□□□□□ -1.06
TIMP1-204ENST00000445623 A0A0J9YXY3 114 aa8.41□□□□□ -1.06
TIMP1-204ENST00000445623 CHTF8P0CG12 524 aa8.41□□□□□ -1.06
TIMP1-204ENST00000445623 SMIM13P0DJ93 91 aa8.41□□□□□ -1.06
TIMP1-204ENST00000445623 SPATA45Q537H7 98 aa8.41□□□□□ -1.06
TIMP1-204ENST00000445623 SCGB1D4Q6XE38 83 aa8.41□□□□□ -1.06
TIMP1-204ENST00000445623 SPACA4Q8TDM5 124 aa8.41□□□□□ -1.06
TIMP1-204ENST00000445623 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.41□□□□□ -1.06
TIMP1-204ENST00000445623 PKHD1P08F94 4074 aa8.4□□□□□ -1.06
TIMP1-204ENST00000445623 A0A0U1RRA0 63 aa8.4□□□□□ -1.06
TIMP1-204ENST00000445623 S100A12P80511 92 aa8.4□□□□□ -1.06
TIMP1-204ENST00000445623 PCP2Q8IVA1 136 aa8.4□□□□□ -1.06
TIMP1-204ENST00000445623 TTTY13Q9BZ97 58 aa8.4□□□□□ -1.06
TIMP1-204ENST00000445623 TIMM17BO60830 172 aa8.39□□□□□ -1.07
TIMP1-204ENST00000445623 FAM30AQ9NZY2 134 aa8.39□□□□□ -1.07
TIMP1-204ENST00000445623 EPPK1P58107 5090 aaKnown RBP8.39□□□□□ -1.07
TIMP1-204ENST00000445623 DYNC1H1Q14204 4646 aaKnown RBP8.38□□□□□ -1.07
TIMP1-204ENST00000445623 LOC105371267A0A1B0GV96 52 aa8.38□□□□□ -1.07
TIMP1-204ENST00000445623 TMEM238C9JI98 176 aa8.38□□□□□ -1.07
TIMP1-204ENST00000445623 SMIM6P0DI80 62 aa8.38□□□□□ -1.07
TIMP1-204ENST00000445623 COX8AP10176 69 aa8.38□□□□□ -1.07
TIMP1-204ENST00000445623 MIR7-3HGQ8N6C7 128 aa8.38□□□□□ -1.07
TIMP1-204ENST00000445623 XAGE1AQ9HD64 81 aa8.38□□□□□ -1.07
TIMP1-204ENST00000445623 PANO1I0J062 215 aa8.37□□□□□ -1.07
TIMP1-204ENST00000445623 CDK2AP2O75956 126 aa8.37□□□□□ -1.07
TIMP1-204ENST00000445623 C9orf129Q5T035 196 aaKnown RBP8.37□□□□□ -1.07
TIMP1-204ENST00000445623 MIEN1Q9BRT3 115 aa8.37□□□□□ -1.07
TIMP1-204ENST00000445623 SND1-IT1Q9HBX3 110 aa8.37□□□□□ -1.07
TIMP1-204ENST00000445623 LRP1BQ9NZR2 4599 aa8.36□□□□□ -1.07
TIMP1-204ENST00000445623 A0A087WYN8 130 aa8.36□□□□□ -1.07
TIMP1-204ENST00000445623 SCXQ7RTU7 201 aa8.36□□□□□ -1.07
TIMP1-204ENST00000445623 BOD1L2Q8IYS8 172 aa8.36□□□□□ -1.07
TIMP1-204ENST00000445623 PLAC8Q9NZF1 115 aa8.36□□□□□ -1.07
TIMP1-204ENST00000445623 DLEU1O43261 78 aa8.35□□□□□ -1.07
TIMP1-204ENST00000445623 CIRBP-AS1Q8TBR5 109 aa8.35□□□□□ -1.07
TIMP1-204ENST00000445623 COPS9Q8WXC6 57 aa8.35□□□□□ -1.07
TIMP1-204ENST00000445623 RPL24P83731 157 aaKnown RBP8.34□□□□□ -1.07
TIMP1-204ENST00000445623 SLC25A34Q6PIV7 304 aa8.34□□□□□ -1.07
TIMP1-204ENST00000445623 FAM19A5Q7Z5A7 132 aaPredicted RBP8.34□□□□□ -1.07
TIMP1-204ENST00000445623 DAND5Q8N907 189 aa8.34□□□□□ -1.07
TIMP1-204ENST00000445623 C14orf144Q96I85 54 aa8.34□□□□□ -1.07
TIMP1-204ENST00000445623 PLA2G2DQ9UNK4 145 aa8.34□□□□□ -1.07
TIMP1-204ENST00000445623 DNAH8Q96JB1 4490 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms