RNA–Protein interactions for RNA: ENST00000444533.5

SSBP3-208, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-208ENST00000444533 UNQ6190/PRO20217Q6UXQ8 127 aa9.06□□□□□ -0.96
SSBP3-208ENST00000444533 BIRC6Q9NR09 4857 aa9.06□□□□□ -0.96
SSBP3-208ENST00000444533 XGP55808 180 aa9.05□□□□□ -0.96
SSBP3-208ENST00000444533 GAGE2BQ13066 116 aa9.05□□□□□ -0.96
SSBP3-208ENST00000444533 MAJINQ3KP22 176 aa9.05□□□□□ -0.96
SSBP3-208ENST00000444533 SFTA2Q6UW10 78 aa9.05□□□□□ -0.96
SSBP3-208ENST00000444533 DPM2O94777 84 aa9.04□□□□□ -0.96
SSBP3-208ENST00000444533 S100A2P29034 98 aa9.04□□□□□ -0.96
SSBP3-208ENST00000444533 HERVK_113P61574 105 aa9.04□□□□□ -0.96
SSBP3-208ENST00000444533 ODF1Q14990 250 aa9.04□□□□□ -0.96
SSBP3-208ENST00000444533 C2orf82Q6UX34 121 aa9.04□□□□□ -0.96
SSBP3-208ENST00000444533 SCXQ7RTU7 201 aa9.04□□□□□ -0.96
SSBP3-208ENST00000444533 FAM229AH3BQW9 127 aa9.03□□□□□ -0.96
SSBP3-208ENST00000444533 HAMPP81172 84 aa9.03□□□□□ -0.96
SSBP3-208ENST00000444533 A0A096LNI7 61 aa9.02□□□□□ -0.97
SSBP3-208ENST00000444533 IGKCP01834 107 aa9.02□□□□□ -0.97
SSBP3-208ENST00000444533 PTTG1IPP53801 180 aa9.02□□□□□ -0.97
SSBP3-208ENST00000444533 C10orf25Q5T742 122 aa9.02□□□□□ -0.97
SSBP3-208ENST00000444533 CIRBP-AS1Q8TBR5 109 aa9.02□□□□□ -0.97
SSBP3-208ENST00000444533 SPACA4Q8TDM5 124 aa9.02□□□□□ -0.97
SSBP3-208ENST00000444533 C6orf48Q9UBA6 75 aa9.02□□□□□ -0.97
SSBP3-208ENST00000444533 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.02□□□□□ -0.97
SSBP3-208ENST00000444533 IGLV5-39A0A0G2JS06 123 aa9.01□□□□□ -0.97
SSBP3-208ENST00000444533 C20orf202A1L168 122 aa9.01□□□□□ -0.97
SSBP3-208ENST00000444533 NDUFC2-KCTD14E9PQ53 114 aa9.01□□□□□ -0.97
SSBP3-208ENST00000444533 SYS1-DBNDD2H3BUS1 97 aa9.01□□□□□ -0.97
SSBP3-208ENST00000444533 TLX1NBP0CAT3 122 aa9.01□□□□□ -0.97
SSBP3-208ENST00000444533 CHTF8P0CG12 524 aa9.01□□□□□ -0.97
SSBP3-208ENST00000444533 CIRBPQ14011 172 aaKnown RBP9.01□□□□□ -0.97
SSBP3-208ENST00000444533 PET117Q6UWS5 81 aa9.01□□□□□ -0.97
SSBP3-208ENST00000444533 STPG4Q8N801 248 aa9.01□□□□□ -0.97
SSBP3-208ENST00000444533 DYNC1H1Q14204 4646 aaKnown RBP9.01□□□□□ -0.97
SSBP3-208ENST00000444533 TMEM223A0PJW6 202 aa9□□□□□ -0.97
SSBP3-208ENST00000444533 KRTDAPP60985 99 aa9□□□□□ -0.97
SSBP3-208ENST00000444533 Q8N1X5 172 aa9□□□□□ -0.97
SSBP3-208ENST00000444533 DNAH5Q8TE73 4624 aa9□□□□□ -0.97
SSBP3-208ENST00000444533 LRP1BQ9NZR2 4599 aa8.99□□□□□ -0.97
SSBP3-208ENST00000444533 A0A087WYN8 130 aa8.99□□□□□ -0.97
SSBP3-208ENST00000444533 EPM2AB3EWF7 344 aa8.99□□□□□ -0.97
SSBP3-208ENST00000444533 SMR3BP02814 79 aaPredicted RBP8.99□□□□□ -0.97
SSBP3-208ENST00000444533 AKR1D1P51857 326 aa8.99□□□□□ -0.97
SSBP3-208ENST00000444533 GAGE2EQ4V326 116 aa8.99□□□□□ -0.97
SSBP3-208ENST00000444533 GAGE2DQ9UEU5 116 aa8.99□□□□□ -0.97
SSBP3-208ENST00000444533 PLA2G1BP04054 148 aaKnown RBP8.98□□□□□ -0.97
SSBP3-208ENST00000444533 C7orf33Q8WU49 177 aa8.98□□□□□ -0.97
SSBP3-208ENST00000444533 PMCHL2Q9BQD1 86 aa8.98□□□□□ -0.97
SSBP3-208ENST00000444533 C9orf116Q5BN46 136 aaPredicted RBP8.97□□□□□ -0.97
SSBP3-208ENST00000444533 PLEKHB2Q96CS7 222 aa8.97□□□□□ -0.97
SSBP3-208ENST00000444533 PLAC8Q9NZF1 115 aa8.97□□□□□ -0.97
SSBP3-208ENST00000444533 LINC00587B1AMM8 73 aa8.96□□□□□ -0.98
SSBP3-208ENST00000444533 PANO1I0J062 215 aa8.96□□□□□ -0.98
SSBP3-208ENST00000444533 C3orf79P0CE67 100 aa8.96□□□□□ -0.98
SSBP3-208ENST00000444533 Q6ZRP5 223 aa8.96□□□□□ -0.98
SSBP3-208ENST00000444533 LINC00528Q8N1L1 170 aa8.96□□□□□ -0.98
SSBP3-208ENST00000444533 HERV-K104P63124 156 aa8.95□□□□□ -0.98
SSBP3-208ENST00000444533 COX17Q14061 63 aa8.95□□□□□ -0.98
SSBP3-208ENST00000444533 LINC01545Q5VT33 79 aa8.95□□□□□ -0.98
SSBP3-208ENST00000444533 MYMXA0A1B0GTQ4 84 aa8.94□□□□□ -0.98
SSBP3-208ENST00000444533 LEPROTO15243 131 aa8.94□□□□□ -0.98
SSBP3-208ENST00000444533 LGALS3P17931 250 aaKnown RBP8.94□□□□□ -0.98
SSBP3-208ENST00000444533 Q5VSD8 79 aa8.94□□□□□ -0.98
SSBP3-208ENST00000444533 HIST3H2BBQ8N257 126 aa8.94□□□□□ -0.98
SSBP3-208ENST00000444533 PFN2P35080 140 aa8.93□□□□□ -0.98
SSBP3-208ENST00000444533 NDUFA12Q9UI09 145 aa8.93□□□□□ -0.98
SSBP3-208ENST00000444533 ERG28Q9UKR5 140 aa8.93□□□□□ -0.98
SSBP3-208ENST00000444533 NMUP48645 174 aa8.92□□□□□ -0.98
SSBP3-208ENST00000444533 SNRPEP62304 92 aaKnown RBP8.92□□□□□ -0.98
SSBP3-208ENST00000444533 MEIG1Q5JSS6 88 aa8.92□□□□□ -0.98
SSBP3-208ENST00000444533 ZNF625Q96I27 306 aaPredicted RBP8.92□□□□□ -0.98
SSBP3-208ENST00000444533 KIAA1109Q2LD37 5005 aa8.92□□□□□ -0.98
SSBP3-208ENST00000444533 J3QQQ9 107 aa8.91□□□□□ -0.98
SSBP3-208ENST00000444533 LINC00158P58513 81 aa8.91□□□□□ -0.98
SSBP3-208ENST00000444533 RPL37AP61513 92 aaKnown RBP8.91□□□□□ -0.98
SSBP3-208ENST00000444533 HIST1H2BLQ99880 126 aa8.91□□□□□ -0.98
SSBP3-208ENST00000444533 FAM19A5Q7Z5A7 132 aaPredicted RBP8.9□□□□□ -0.98
SSBP3-208ENST00000444533 XAGE1AQ9HD64 81 aa8.9□□□□□ -0.98
SSBP3-208ENST00000444533 E9PLD3 99 aa8.89□□□□□ -0.99
SSBP3-208ENST00000444533 APOBP04114 4563 aaKnown RBP8.88□□□□□ -0.99
SSBP3-208ENST00000444533 A0A1W2PNN7 141 aa8.88□□□□□ -0.99
SSBP3-208ENST00000444533 C5orf52A6NGY3 159 aa8.87□□□□□ -0.99
SSBP3-208ENST00000444533 HSBP1L1C9JCN9 74 aa8.87□□□□□ -0.99
SSBP3-208ENST00000444533 M0QXV9 152 aa8.87□□□□□ -0.99
SSBP3-208ENST00000444533 LBHQ53QV2 105 aaPredicted RBP8.87□□□□□ -0.99
SSBP3-208ENST00000444533 C9orf129Q5T035 196 aaKnown RBP8.87□□□□□ -0.99
SSBP3-208ENST00000444533 UBE2BP63146 152 aa8.86□□□□□ -0.99
SSBP3-208ENST00000444533 RPL24P83731 157 aaKnown RBP8.86□□□□□ -0.99
SSBP3-208ENST00000444533 NKAPP1Q8N9T2 125 aa8.86□□□□□ -0.99
SSBP3-208ENST00000444533 RYR1P21817 5038 aa8.86□□□□□ -0.99
SSBP3-208ENST00000444533 HSPG2P98160 4391 aa8.85□□□□□ -0.99
SSBP3-208ENST00000444533 A0A0U1RRA0 63 aa8.85□□□□□ -0.99
SSBP3-208ENST00000444533 FAM168BA1KXE4 195 aa8.85□□□□□ -0.99
SSBP3-208ENST00000444533 SND1-IT1Q9HBX3 110 aa8.85□□□□□ -0.99
SSBP3-208ENST00000444533 SCGB1D1O95968 90 aa8.84□□□□□ -0.99
SSBP3-208ENST00000444533 SMIM13P0DJ93 91 aa8.84□□□□□ -0.99
SSBP3-208ENST00000444533 TSPEAR-AS2P59090 65 aa8.84□□□□□ -0.99
SSBP3-208ENST00000444533 PHF5AQ7RTV0 110 aaKnown RBP8.84□□□□□ -0.99
SSBP3-208ENST00000444533 MIEN1Q9BRT3 115 aa8.84□□□□□ -0.99
SSBP3-208ENST00000444533 INAFM2P0DMQ5 153 aa8.83□□□□□ -1
SSBP3-208ENST00000444533 ATOH7Q8N100 152 aa8.83□□□□□ -1
SSBP3-208ENST00000444533 TP73-AS1Q9UF72 201 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 89.2 ms