RNA–Protein interactions for RNA: ENST00000442708.5

USP39-205, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-205ENST00000442708 Q8IZM0 81 aa10.21□□□□□ -0.77
USP39-205ENST00000442708 CIRBP-AS1Q8TBR5 109 aa10.21□□□□□ -0.77
USP39-205ENST00000442708 C6orf48Q9UBA6 75 aa10.21□□□□□ -0.77
USP39-205ENST00000442708 SMR3BP02814 79 aaPredicted RBP10.2□□□□□ -0.78
USP39-205ENST00000442708 ODF1Q14990 250 aa10.2□□□□□ -0.78
USP39-205ENST00000442708 RNF151Q2KHN1 245 aa10.2□□□□□ -0.78
USP39-205ENST00000442708 SPACA4Q8TDM5 124 aa10.2□□□□□ -0.78
USP39-205ENST00000442708 HSPB8Q9UJY1 196 aa10.2□□□□□ -0.78
USP39-205ENST00000442708 IGKV2-24A0A0C4DH68 120 aa10.19□□□□□ -0.78
USP39-205ENST00000442708 F8VRH5 84 aa10.19□□□□□ -0.78
USP39-205ENST00000442708 PRSS2P07478 247 aa10.19□□□□□ -0.78
USP39-205ENST00000442708 IGLV5-39A0A0G2JS06 123 aa10.18□□□□□ -0.78
USP39-205ENST00000442708 H3BRM9 83 aa10.18□□□□□ -0.78
USP39-205ENST00000442708 C9orf116Q5BN46 136 aaPredicted RBP10.18□□□□□ -0.78
USP39-205ENST00000442708 C6orf226Q5I0X4 101 aa10.18□□□□□ -0.78
USP39-205ENST00000442708 TMEM170BQ5T4T1 132 aa10.18□□□□□ -0.78
USP39-205ENST00000442708 COX7B2Q8TF08 81 aa10.18□□□□□ -0.78
USP39-205ENST00000442708 LOC107984640A0A0U1RRK4 108 aa10.17□□□□□ -0.78
USP39-205ENST00000442708 Q8N1X5 172 aa10.17□□□□□ -0.78
USP39-205ENST00000442708 ABCA13Q86UQ4 5058 aa10.17□□□□□ -0.78
USP39-205ENST00000442708 PTTG1IPP53801 180 aa10.16□□□□□ -0.78
USP39-205ENST00000442708 CKS1BP61024 79 aa10.16□□□□□ -0.78
USP39-205ENST00000442708 MAJINQ3KP22 176 aa10.16□□□□□ -0.78
USP39-205ENST00000442708 PMCHL2Q9BQD1 86 aa10.16□□□□□ -0.78
USP39-205ENST00000442708 A0A087WYN8 130 aa10.15□□□□□ -0.78
USP39-205ENST00000442708 TMEM223A0PJW6 202 aa10.15□□□□□ -0.78
USP39-205ENST00000442708 GAGE2BQ13066 116 aa10.15□□□□□ -0.78
USP39-205ENST00000442708 TRBV30A0A0K0K1B3 111 aa10.14□□□□□ -0.79
USP39-205ENST00000442708 RPL18AQ02543 176 aaKnown RBP10.14□□□□□ -0.79
USP39-205ENST00000442708 Q6ZRP5 223 aa10.14□□□□□ -0.79
USP39-205ENST00000442708 MAP1LC3CQ9BXW4 147 aa10.14□□□□□ -0.79
USP39-205ENST00000442708 TLX1NBP0CAT3 122 aa10.13□□□□□ -0.79
USP39-205ENST00000442708 DPH3Q96FX2 82 aa10.13□□□□□ -0.79
USP39-205ENST00000442708 PLAC8Q9NZF1 115 aa10.13□□□□□ -0.79
USP39-205ENST00000442708 SYS1-DBNDD2H3BUS1 97 aa10.12□□□□□ -0.79
USP39-205ENST00000442708 CXCL5P42830 114 aa10.12□□□□□ -0.79
USP39-205ENST00000442708 STPG4Q8N801 248 aa10.12□□□□□ -0.79
USP39-205ENST00000442708 PKIGQ9Y2B9 76 aa10.12□□□□□ -0.79
USP39-205ENST00000442708 FAT1Q14517 4588 aa10.12□□□□□ -0.79
USP39-205ENST00000442708 C3orf79P0CE67 100 aa10.11□□□□□ -0.79
USP39-205ENST00000442708 LINC00528Q8N1L1 170 aa10.11□□□□□ -0.79
USP39-205ENST00000442708 SRRM2Q9UQ35 2752 aaKnown RBP10.1□□□□□ -0.79
USP39-205ENST00000442708 A0A1W2PNN7 141 aa10.1□□□□□ -0.79
USP39-205ENST00000442708 DPM2O94777 84 aa10.1□□□□□ -0.79
USP39-205ENST00000442708 PLNP26678 52 aa10.1□□□□□ -0.79
USP39-205ENST00000442708 Q5VSD8 79 aa10.1□□□□□ -0.79
USP39-205ENST00000442708 LINC00474Q9P2X8 69 aa10.1□□□□□ -0.79
USP39-205ENST00000442708 VPS13BQ7Z7G8 4022 aa10.09□□□□□ -0.79
USP39-205ENST00000442708 NDUFC2-KCTD14E9PQ53 114 aa10.09□□□□□ -0.79
USP39-205ENST00000442708 IGKCP01834 107 aa10.09□□□□□ -0.79
USP39-205ENST00000442708 GAGE2EQ4V326 116 aa10.09□□□□□ -0.79
USP39-205ENST00000442708 HIST3H2BBQ8N257 126 aa10.09□□□□□ -0.79
USP39-205ENST00000442708 GAGE2DQ9UEU5 116 aa10.09□□□□□ -0.79
USP39-205ENST00000442708 EPM2AB3EWF7 344 aa10.08□□□□□ -0.8
USP39-205ENST00000442708 LINC01545Q5VT33 79 aa10.08□□□□□ -0.8
USP39-205ENST00000442708 ZNF625Q96I27 306 aaPredicted RBP10.08□□□□□ -0.8
USP39-205ENST00000442708 FAM168BA1KXE4 195 aa10.07□□□□□ -0.8
USP39-205ENST00000442708 TSPEAR-AS2P59090 65 aa10.07□□□□□ -0.8
USP39-205ENST00000442708 KRTDAPP60985 99 aa10.07□□□□□ -0.8
USP39-205ENST00000442708 C9orf129Q5T035 196 aaKnown RBP10.07□□□□□ -0.8
USP39-205ENST00000442708 PET117Q6UWS5 81 aa10.07□□□□□ -0.8
USP39-205ENST00000442708 KRTAP10-4P60372 401 aaPredicted RBP10.06□□□□□ -0.8
USP39-205ENST00000442708 KRTAP7-1Q8IUC3 87 aa10.06□□□□□ -0.8
USP39-205ENST00000442708 FAM229AH3BQW9 127 aa10.05□□□□□ -0.8
USP39-205ENST00000442708 HIST1H2BLQ99880 126 aa10.05□□□□□ -0.8
USP39-205ENST00000442708 LEPROTO15243 131 aa10.03□□□□□ -0.8
USP39-205ENST00000442708 S100A6P06703 90 aa10.03□□□□□ -0.8
USP39-205ENST00000442708 SNRPEP62304 92 aaKnown RBP10.03□□□□□ -0.8
USP39-205ENST00000442708 XAGE1AQ9HD64 81 aa10.03□□□□□ -0.8
USP39-205ENST00000442708 PFN2P35080 140 aa10.02□□□□□ -0.81
USP39-205ENST00000442708 ERG28Q9UKR5 140 aa10.02□□□□□ -0.81
USP39-205ENST00000442708 C5orf52A6NGY3 159 aa10.01□□□□□ -0.81
USP39-205ENST00000442708 FAM19A5Q7Z5A7 132 aaPredicted RBP10.01□□□□□ -0.81
USP39-205ENST00000442708 J3QQQ9 107 aa10□□□□□ -0.81
USP39-205ENST00000442708 S100A2P29034 98 aa10□□□□□ -0.81
USP39-205ENST00000442708 HERVK_113P61574 105 aa10□□□□□ -0.81
USP39-205ENST00000442708 SERTAD4-AS1Q5TG53 156 aa10□□□□□ -0.81
USP39-205ENST00000442708 PHF5AQ7RTV0 110 aaKnown RBP10□□□□□ -0.81
USP39-205ENST00000442708 PLEKHB2Q96CS7 222 aa10□□□□□ -0.81
USP39-205ENST00000442708 NDUFA12Q9UI09 145 aa10□□□□□ -0.81
USP39-205ENST00000442708 PLA2G1BP04054 148 aaKnown RBP9.99□□□□□ -0.81
USP39-205ENST00000442708 RPL37AP61513 92 aaKnown RBP9.99□□□□□ -0.81
USP39-205ENST00000442708 SFTA2Q6UW10 78 aa9.99□□□□□ -0.81
USP39-205ENST00000442708 E9PLD3 99 aa9.98□□□□□ -0.81
USP39-205ENST00000442708 COX17Q14061 63 aa9.97□□□□□ -0.81
USP39-205ENST00000442708 KRTAP11-1Q8IUC1 163 aa9.97□□□□□ -0.81
USP39-205ENST00000442708 ATOH7Q8N100 152 aa9.97□□□□□ -0.81
USP39-205ENST00000442708 C7orf33Q8WU49 177 aa9.97□□□□□ -0.81
USP39-205ENST00000442708 IGKV2D-26A0A0A0MRZ7 120 aa9.96□□□□□ -0.82
USP39-205ENST00000442708 A0A0U1RRA0 63 aa9.96□□□□□ -0.82
USP39-205ENST00000442708 MYMXA0A1B0GTQ4 84 aa9.96□□□□□ -0.82
USP39-205ENST00000442708 SMIM13P0DJ93 91 aa9.96□□□□□ -0.82
USP39-205ENST00000442708 SND1-IT1Q9HBX3 110 aa9.96□□□□□ -0.82
USP39-205ENST00000442708 C20orf202A1L168 122 aa9.95□□□□□ -0.82
USP39-205ENST00000442708 M0QXV9 152 aa9.95□□□□□ -0.82
USP39-205ENST00000442708 LGALS3P17931 250 aaKnown RBP9.95□□□□□ -0.82
USP39-205ENST00000442708 HNRNPA3P51991 378 aaKnown RBP9.95□□□□□ -0.82
USP39-205ENST00000442708 LINC00158P58513 81 aa9.95□□□□□ -0.82
USP39-205ENST00000442708 HERV-K104P63124 156 aa9.95□□□□□ -0.82
USP39-205ENST00000442708 Q8NDZ9 215 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms