RNA–Protein interactions for RNA: ENST00000440571.5

CNOT3-203, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 5

Gene CNOT3, Length 1,125 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-203ENST00000440571 C6orf48Q9UBA6 75 aa14.3□□□□□ -0.12
CNOT3-203ENST00000440571 SMIM1B2RUZ4 78 aa14.29□□□□□ -0.12
CNOT3-203ENST00000440571 PLA2G1BP04054 148 aaKnown RBP14.29□□□□□ -0.12
CNOT3-203ENST00000440571 LINC00310P59036 64 aa14.29□□□□□ -0.12
CNOT3-203ENST00000440571 PLAC8Q9NZF1 115 aa14.29□□□□□ -0.12
CNOT3-203ENST00000440571 NUPR1O60356 82 aa14.28□□□□□ -0.12
CNOT3-203ENST00000440571 SPINK8P0C7L1 97 aa14.28□□□□□ -0.12
CNOT3-203ENST00000440571 RPL18AQ02543 176 aaKnown RBP14.28□□□□□ -0.12
CNOT3-203ENST00000440571 CHTOPQ9Y3Y2 248 aaKnown RBP14.28□□□□□ -0.12
CNOT3-203ENST00000440571 TRBV30A0A0K0K1B3 111 aa14.27□□□□□ -0.13
CNOT3-203ENST00000440571 TRAV12-1A0A0B4J245 112 aa14.26□□□□□ -0.13
CNOT3-203ENST00000440571 LEPROTL1O95214 131 aa14.26□□□□□ -0.13
CNOT3-203ENST00000440571 COX7B2Q8TF08 81 aa14.26□□□□□ -0.13
CNOT3-203ENST00000440571 HIST1H2BKO60814 126 aa14.25□□□□□ -0.13
CNOT3-203ENST00000440571 HIST1H2BJP06899 126 aa14.25□□□□□ -0.13
CNOT3-203ENST00000440571 ZNF22P17026 224 aaPredicted RBP14.25□□□□□ -0.13
CNOT3-203ENST00000440571 HIST1H2BOP23527 126 aa14.25□□□□□ -0.13
CNOT3-203ENST00000440571 HIST1H2BBP33778 126 aa14.25□□□□□ -0.13
CNOT3-203ENST00000440571 HIST1H2BDP58876 126 aa14.25□□□□□ -0.13
CNOT3-203ENST00000440571 HIST1H2BCP62807 126 aa14.25□□□□□ -0.13
CNOT3-203ENST00000440571 HIST2H2BEQ16778 126 aa14.25□□□□□ -0.13
CNOT3-203ENST00000440571 HIST2H2BFQ5QNW6 126 aaPredicted RBP14.25□□□□□ -0.13
CNOT3-203ENST00000440571 HIST1H2BHQ93079 126 aa14.25□□□□□ -0.13
CNOT3-203ENST00000440571 HIST1H2BNQ99877 126 aa14.25□□□□□ -0.13
CNOT3-203ENST00000440571 HIST1H2BMQ99879 126 aa14.25□□□□□ -0.13
CNOT3-203ENST00000440571 TLX1NBP0CAT3 122 aa14.24□□□□□ -0.13
CNOT3-203ENST00000440571 HSPB8Q9UJY1 196 aa14.24□□□□□ -0.13
CNOT3-203ENST00000440571 C11orf86A6NJI1 115 aa14.23□□□□□ -0.13
CNOT3-203ENST00000440571 ATP6V1G1O75348 118 aa14.23□□□□□ -0.13
CNOT3-203ENST00000440571 FABP4P15090 132 aa14.23□□□□□ -0.13
CNOT3-203ENST00000440571 CXCL5P42830 114 aa14.23□□□□□ -0.13
CNOT3-203ENST00000440571 TMEM170BQ5T4T1 132 aa14.23□□□□□ -0.13
CNOT3-203ENST00000440571 F8VRH5 84 aa14.22□□□□□ -0.13
CNOT3-203ENST00000440571 INAFM2P0DMQ5 153 aa14.22□□□□□ -0.13
CNOT3-203ENST00000440571 C9orf116Q5BN46 136 aaPredicted RBP14.22□□□□□ -0.13
CNOT3-203ENST00000440571 Q6ZRP5 223 aa14.22□□□□□ -0.13
CNOT3-203ENST00000440571 H0Y8G0 127 aa14.2□□□□□ -0.14
CNOT3-203ENST00000440571 RPL37AP61513 92 aaKnown RBP14.2□□□□□ -0.14
CNOT3-203ENST00000440571 GAGE2EQ4V326 116 aa14.2□□□□□ -0.14
CNOT3-203ENST00000440571 GAGE2DQ9UEU5 116 aa14.2□□□□□ -0.14
CNOT3-203ENST00000440571 NDUFC2-KCTD14E9PQ53 114 aa14.19□□□□□ -0.14
CNOT3-203ENST00000440571 C7orf33Q8WU49 177 aa14.19□□□□□ -0.14
CNOT3-203ENST00000440571 ABCA13Q86UQ4 5058 aa14.18□□□□□ -0.14
CNOT3-203ENST00000440571 IGLV5-39A0A0G2JS06 123 aa14.18□□□□□ -0.14
CNOT3-203ENST00000440571 A0A1W2PNN7 141 aa14.18□□□□□ -0.14
CNOT3-203ENST00000440571 VPS13BQ7Z7G8 4022 aa14.17□□□□□ -0.14
CNOT3-203ENST00000440571 ODF1Q14990 250 aa14.15□□□□□ -0.14
CNOT3-203ENST00000440571 PCLOQ9Y6V0 5065 aa14.15□□□□□ -0.14
CNOT3-203ENST00000440571 MAP1LC3CQ9BXW4 147 aa14.14□□□□□ -0.15
CNOT3-203ENST00000440571 SRRM2Q9UQ35 2752 aaKnown RBP14.13□□□□□ -0.15
CNOT3-203ENST00000440571 TMEM223A0PJW6 202 aa14.12□□□□□ -0.15
CNOT3-203ENST00000440571 KRTAP10-4P60372 401 aaPredicted RBP14.12□□□□□ -0.15
CNOT3-203ENST00000440571 FAM168BA1KXE4 195 aa14.09□□□□□ -0.15
CNOT3-203ENST00000440571 PLNP26678 52 aa14.09□□□□□ -0.15
CNOT3-203ENST00000440571 COA6Q5JTJ3 125 aaKnown RBP14.09□□□□□ -0.15
CNOT3-203ENST00000440571 C9orf129Q5T035 196 aaKnown RBP14.08□□□□□ -0.16
CNOT3-203ENST00000440571 DPM2O94777 84 aa14.07□□□□□ -0.16
CNOT3-203ENST00000440571 SFTA2Q6UW10 78 aa14.07□□□□□ -0.16
CNOT3-203ENST00000440571 FAM19A5Q7Z5A7 132 aaPredicted RBP14.07□□□□□ -0.16
CNOT3-203ENST00000440571 PMCHL2Q9BQD1 86 aa14.07□□□□□ -0.16
CNOT3-203ENST00000440571 XAGE1AQ9HD64 81 aa14.07□□□□□ -0.16
CNOT3-203ENST00000440571 PHF5AQ7RTV0 110 aaKnown RBP14.06□□□□□ -0.16
CNOT3-203ENST00000440571 IGKCP01834 107 aa14.04□□□□□ -0.16
CNOT3-203ENST00000440571 PFN2P35080 140 aa14.04□□□□□ -0.16
CNOT3-203ENST00000440571 ZNF625Q96I27 306 aaPredicted RBP14.04□□□□□ -0.16
CNOT3-203ENST00000440571 SYS1-DBNDD2H3BUS1 97 aa14.03□□□□□ -0.16
CNOT3-203ENST00000440571 KRTAP7-1Q8IUC3 87 aa14.02□□□□□ -0.17
CNOT3-203ENST00000440571 ERG28Q9UKR5 140 aa14.02□□□□□ -0.17
CNOT3-203ENST00000440571 PRR3P79522 188 aaKnown RBP14.01□□□□□ -0.17
CNOT3-203ENST00000440571 COX17Q14061 63 aa14.01□□□□□ -0.17
CNOT3-203ENST00000440571 M0QXV9 152 aa14□□□□□ -0.17
CNOT3-203ENST00000440571 HERVK_113P61574 105 aa14□□□□□ -0.17
CNOT3-203ENST00000440571 PET117Q6UWS5 81 aa13.99□□□□□ -0.17
CNOT3-203ENST00000440571 LEPROTO15243 131 aa13.98□□□□□ -0.17
CNOT3-203ENST00000440571 HNRNPA3P51991 378 aaKnown RBP13.98□□□□□ -0.17
CNOT3-203ENST00000440571 SERTAD4-AS1Q5TG53 156 aa13.98□□□□□ -0.17
CNOT3-203ENST00000440571 PLEKHB2Q96CS7 222 aa13.98□□□□□ -0.17
CNOT3-203ENST00000440571 NDUFA12Q9UI09 145 aa13.97□□□□□ -0.17
CNOT3-203ENST00000440571 C22orf24Q9Y442 160 aa13.97□□□□□ -0.17
CNOT3-203ENST00000440571 C3orf79P0CE67 100 aa13.96□□□□□ -0.17
CNOT3-203ENST00000440571 LINC00158P58513 81 aa13.96□□□□□ -0.17
CNOT3-203ENST00000440571 HERV-K104P63124 156 aa13.96□□□□□ -0.17
CNOT3-203ENST00000440571 PSORS1C2Q9UIG4 136 aa13.96□□□□□ -0.17
CNOT3-203ENST00000440571 MYMXA0A1B0GTQ4 84 aa13.95□□□□□ -0.18
CNOT3-203ENST00000440571 KRTDAPP60985 99 aa13.95□□□□□ -0.18
CNOT3-203ENST00000440571 UBE2BP63146 152 aa13.95□□□□□ -0.18
CNOT3-203ENST00000440571 LBHQ53QV2 105 aaPredicted RBP13.95□□□□□ -0.18
CNOT3-203ENST00000440571 LINC01545Q5VT33 79 aa13.95□□□□□ -0.18
CNOT3-203ENST00000440571 SND1-IT1Q9HBX3 110 aa13.94□□□□□ -0.18
CNOT3-203ENST00000440571 PLA2G2DQ9UNK4 145 aa13.94□□□□□ -0.18
CNOT3-203ENST00000440571 FLG2Q5D862 2391 aaPredicted RBP13.94□□□□□ -0.18
CNOT3-203ENST00000440571 LINC00587B1AMM8 73 aa13.93□□□□□ -0.18
CNOT3-203ENST00000440571 J3QQQ9 107 aa13.93□□□□□ -0.18
CNOT3-203ENST00000440571 A0A0U1RRA0 63 aa13.92□□□□□ -0.18
CNOT3-203ENST00000440571 MEIG1Q5JSS6 88 aa13.92□□□□□ -0.18
CNOT3-203ENST00000440571 C1orf137Q5JT78 98 aa13.92□□□□□ -0.18
CNOT3-203ENST00000440571 TP73-AS1Q9UF72 201 aa13.92□□□□□ -0.18
CNOT3-203ENST00000440571 S100A6P06703 90 aa13.91□□□□□ -0.18
CNOT3-203ENST00000440571 LGALS3P17931 250 aaKnown RBP13.91□□□□□ -0.18
CNOT3-203ENST00000440571 TSPEAR-AS2P59090 65 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms