RNA–Protein interactions for RNA: ENST00000440514.1

CPSF4-205, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 578 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-205ENST00000440514 C2orf82Q6UX34 121 aa11.43□□□□□ -0.58
CPSF4-205ENST00000440514 Q8IZM0 81 aa11.43□□□□□ -0.58
CPSF4-205ENST00000440514 TOMM7Q9P0U1 55 aa11.43□□□□□ -0.58
CPSF4-205ENST00000440514 C6orf48Q9UBA6 75 aa11.43□□□□□ -0.58
CPSF4-205ENST00000440514 IGLC3P0DOY3 106 aa11.42□□□□□ -0.58
CPSF4-205ENST00000440514 RPL18AQ02543 176 aaKnown RBP11.42□□□□□ -0.58
CPSF4-205ENST00000440514 GAGE2BQ13066 116 aa11.42□□□□□ -0.58
CPSF4-205ENST00000440514 PLAC8Q9NZF1 115 aa11.42□□□□□ -0.58
CPSF4-205ENST00000440514 TRBV30A0A0K0K1B3 111 aa11.41□□□□□ -0.58
CPSF4-205ENST00000440514 SMIM1B2RUZ4 78 aa11.41□□□□□ -0.58
CPSF4-205ENST00000440514 HIST1H2BKO60814 126 aa11.41□□□□□ -0.58
CPSF4-205ENST00000440514 PLA2G1BP04054 148 aaKnown RBP11.41□□□□□ -0.58
CPSF4-205ENST00000440514 HIST1H2BJP06899 126 aa11.41□□□□□ -0.58
CPSF4-205ENST00000440514 HIST1H2BOP23527 126 aa11.41□□□□□ -0.58
CPSF4-205ENST00000440514 HIST1H2BBP33778 126 aa11.41□□□□□ -0.58
CPSF4-205ENST00000440514 PTTG1IPP53801 180 aa11.41□□□□□ -0.58
CPSF4-205ENST00000440514 HIST1H2BDP58876 126 aa11.41□□□□□ -0.58
CPSF4-205ENST00000440514 LINC00310P59036 64 aa11.41□□□□□ -0.58
CPSF4-205ENST00000440514 HIST1H2BCP62807 126 aa11.41□□□□□ -0.58
CPSF4-205ENST00000440514 HIST2H2BEQ16778 126 aa11.41□□□□□ -0.58
CPSF4-205ENST00000440514 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.41□□□□□ -0.58
CPSF4-205ENST00000440514 FAM19A2Q8N3H0 131 aa11.41□□□□□ -0.58
CPSF4-205ENST00000440514 STPG4Q8N801 248 aa11.41□□□□□ -0.58
CPSF4-205ENST00000440514 HIST1H2BHQ93079 126 aa11.41□□□□□ -0.58
CPSF4-205ENST00000440514 HIST1H2BNQ99877 126 aa11.41□□□□□ -0.58
CPSF4-205ENST00000440514 HIST1H2BMQ99879 126 aa11.41□□□□□ -0.58
CPSF4-205ENST00000440514 CHTOPQ9Y3Y2 248 aaKnown RBP11.41□□□□□ -0.58
CPSF4-205ENST00000440514 SFTA2Q6UW10 78 aa11.4□□□□□ -0.58
CPSF4-205ENST00000440514 SPINK8P0C7L1 97 aa11.39□□□□□ -0.59
CPSF4-205ENST00000440514 INAFM2P0DMQ5 153 aa11.39□□□□□ -0.59
CPSF4-205ENST00000440514 KRTAP10-4P60372 401 aaPredicted RBP11.38□□□□□ -0.59
CPSF4-205ENST00000440514 F8VRH5 84 aa11.37□□□□□ -0.59
CPSF4-205ENST00000440514 RPL37AP61513 92 aaKnown RBP11.37□□□□□ -0.59
CPSF4-205ENST00000440514 MAP1LC3CQ9BXW4 147 aa11.37□□□□□ -0.59
CPSF4-205ENST00000440514 TLX1NBP0CAT3 122 aa11.36□□□□□ -0.59
CPSF4-205ENST00000440514 ZNF22P17026 224 aaPredicted RBP11.36□□□□□ -0.59
CPSF4-205ENST00000440514 COX7B2Q8TF08 81 aa11.36□□□□□ -0.59
CPSF4-205ENST00000440514 C11orf86A6NJI1 115 aa11.35□□□□□ -0.59
CPSF4-205ENST00000440514 NUPR1O60356 82 aa11.35□□□□□ -0.59
CPSF4-205ENST00000440514 C9orf116Q5BN46 136 aaPredicted RBP11.35□□□□□ -0.59
CPSF4-205ENST00000440514 TMEM170BQ5T4T1 132 aa11.35□□□□□ -0.59
CPSF4-205ENST00000440514 Q6ZRP5 223 aa11.35□□□□□ -0.59
CPSF4-205ENST00000440514 PLNP26678 52 aa11.34□□□□□ -0.59
CPSF4-205ENST00000440514 COA6Q5JTJ3 125 aaKnown RBP11.34□□□□□ -0.59
CPSF4-205ENST00000440514 GAGE2EQ4V326 116 aa11.33□□□□□ -0.6
CPSF4-205ENST00000440514 GAGE2DQ9UEU5 116 aa11.33□□□□□ -0.6
CPSF4-205ENST00000440514 SRRM2Q9UQ35 2752 aaKnown RBP11.33□□□□□ -0.6
CPSF4-205ENST00000440514 A0A1W2PNN7 141 aa11.32□□□□□ -0.6
CPSF4-205ENST00000440514 FABP4P15090 132 aa11.32□□□□□ -0.6
CPSF4-205ENST00000440514 NDUFC2-KCTD14E9PQ53 114 aa11.31□□□□□ -0.6
CPSF4-205ENST00000440514 C7orf33Q8WU49 177 aa11.31□□□□□ -0.6
CPSF4-205ENST00000440514 IGLV5-39A0A0G2JS06 123 aa11.3□□□□□ -0.6
CPSF4-205ENST00000440514 H0Y8G0 127 aa11.3□□□□□ -0.6
CPSF4-205ENST00000440514 AKR1D1P51857 326 aa11.3□□□□□ -0.6
CPSF4-205ENST00000440514 FAM168BA1KXE4 195 aa11.29□□□□□ -0.6
CPSF4-205ENST00000440514 ODF1Q14990 250 aa11.29□□□□□ -0.6
CPSF4-205ENST00000440514 HNRNPA3P51991 378 aaKnown RBP11.28□□□□□ -0.6
CPSF4-205ENST00000440514 FLG2Q5D862 2391 aaPredicted RBP11.28□□□□□ -0.6
CPSF4-205ENST00000440514 DPM2O94777 84 aa11.27□□□□□ -0.61
CPSF4-205ENST00000440514 HERVK_113P61574 105 aa11.27□□□□□ -0.61
CPSF4-205ENST00000440514 FAM19A5Q7Z5A7 132 aaPredicted RBP11.27□□□□□ -0.61
CPSF4-205ENST00000440514 TMEM223A0PJW6 202 aa11.26□□□□□ -0.61
CPSF4-205ENST00000440514 LINC00587B1AMM8 73 aa11.26□□□□□ -0.61
CPSF4-205ENST00000440514 COX17Q14061 63 aa11.26□□□□□ -0.61
CPSF4-205ENST00000440514 C9orf129Q5T035 196 aaKnown RBP11.26□□□□□ -0.61
CPSF4-205ENST00000440514 PKHD1L1Q86WI1 4243 aa11.25□□□□□ -0.61
CPSF4-205ENST00000440514 S100A6P06703 90 aa11.25□□□□□ -0.61
CPSF4-205ENST00000440514 PET117Q6UWS5 81 aa11.25□□□□□ -0.61
CPSF4-205ENST00000440514 PHF5AQ7RTV0 110 aaKnown RBP11.25□□□□□ -0.61
CPSF4-205ENST00000440514 SYS1-DBNDD2H3BUS1 97 aa11.24□□□□□ -0.61
CPSF4-205ENST00000440514 IGKCP01834 107 aa11.24□□□□□ -0.61
CPSF4-205ENST00000440514 PRR3P79522 188 aaKnown RBP11.24□□□□□ -0.61
CPSF4-205ENST00000440514 KRTAP7-1Q8IUC3 87 aa11.24□□□□□ -0.61
CPSF4-205ENST00000440514 XAGE1AQ9HD64 81 aa11.23□□□□□ -0.61
CPSF4-205ENST00000440514 MYCBP2O75592 4640 aa11.22□□□□□ -0.61
CPSF4-205ENST00000440514 C20orf202A1L168 122 aa11.22□□□□□ -0.61
CPSF4-205ENST00000440514 HERV-K104P63124 156 aa11.22□□□□□ -0.61
CPSF4-205ENST00000440514 PLEKHB2Q96CS7 222 aa11.22□□□□□ -0.61
CPSF4-205ENST00000440514 S100A2P29034 98 aa11.21□□□□□ -0.61
CPSF4-205ENST00000440514 PMCHL2Q9BQD1 86 aa11.21□□□□□ -0.61
CPSF4-205ENST00000440514 M0QXV9 152 aa11.2□□□□□ -0.62
CPSF4-205ENST00000440514 SERTAD4-AS1Q5TG53 156 aa11.19□□□□□ -0.62
CPSF4-205ENST00000440514 ZNF625Q96I27 306 aaPredicted RBP11.19□□□□□ -0.62
CPSF4-205ENST00000440514 MYMXA0A1B0GTQ4 84 aa11.18□□□□□ -0.62
CPSF4-205ENST00000440514 PFN2P35080 140 aa11.18□□□□□ -0.62
CPSF4-205ENST00000440514 NMUP48645 174 aa11.18□□□□□ -0.62
CPSF4-205ENST00000440514 LINC01545Q5VT33 79 aa11.18□□□□□ -0.62
CPSF4-205ENST00000440514 ERG28Q9UKR5 140 aa11.18□□□□□ -0.62
CPSF4-205ENST00000440514 LEPROTO15243 131 aa11.17□□□□□ -0.62
CPSF4-205ENST00000440514 KRTAP11-1Q8IUC1 163 aa11.17□□□□□ -0.62
CPSF4-205ENST00000440514 LBHQ53QV2 105 aaPredicted RBP11.16□□□□□ -0.62
CPSF4-205ENST00000440514 PSORS1C2Q9UIG4 136 aa11.16□□□□□ -0.62
CPSF4-205ENST00000440514 KRTDAPP60985 99 aa11.15□□□□□ -0.62
CPSF4-205ENST00000440514 C3orf79P0CE67 100 aa11.14□□□□□ -0.63
CPSF4-205ENST00000440514 LGALS3P17931 250 aaKnown RBP11.14□□□□□ -0.63
CPSF4-205ENST00000440514 NDUFA12Q9UI09 145 aa11.14□□□□□ -0.63
CPSF4-205ENST00000440514 PLA2G2DQ9UNK4 145 aa11.14□□□□□ -0.63
CPSF4-205ENST00000440514 J3QQQ9 107 aa11.13□□□□□ -0.63
CPSF4-205ENST00000440514 TSPEAR-AS2P59090 65 aa11.13□□□□□ -0.63
CPSF4-205ENST00000440514 UBE2BP63146 152 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 109.7 ms