RNA–Protein interactions for RNA: ENST00000436601.1

LSM3P3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 3, humanhuman

BASIC

Gene LSM3P3, Length 306 nt, Biotype processed pseudogene.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P3-201ENST00000436601 LEPROTO15243 131 aa4.64□□□□□ -1.67
LSM3P3-201ENST00000436601 HERVK_113P61574 105 aa4.64□□□□□ -1.67
LSM3P3-201ENST00000436601 S100A12P80511 92 aa4.64□□□□□ -1.67
LSM3P3-201ENST00000436601 Q6ZRN7 208 aaPredicted RBP4.64□□□□□ -1.67
LSM3P3-201ENST00000436601 TTTY13Q9BZ97 58 aa4.64□□□□□ -1.67
LSM3P3-201ENST00000436601 LCE6AA0A183 80 aa4.63□□□□□ -1.67
LSM3P3-201ENST00000436601 J3QQQ9 107 aa4.63□□□□□ -1.67
LSM3P3-201ENST00000436601 NMUP48645 174 aa4.63□□□□□ -1.67
LSM3P3-201ENST00000436601 KIAA0087Q14695 138 aa4.63□□□□□ -1.67
LSM3P3-201ENST00000436601 PCP2Q8IVA1 136 aa4.63□□□□□ -1.67
LSM3P3-201ENST00000436601 C15orf56Q8N910 161 aa4.63□□□□□ -1.67
LSM3P3-201ENST00000436601 ORAOV1Q8WV07 137 aa4.63□□□□□ -1.67
LSM3P3-201ENST00000436601 PLEKHB2Q96CS7 222 aa4.63□□□□□ -1.67
LSM3P3-201ENST00000436601 C14orf144Q96I85 54 aa4.63□□□□□ -1.67
LSM3P3-201ENST00000436601 TP73-AS1Q9UF72 201 aa4.63□□□□□ -1.67
LSM3P3-201ENST00000436601 STARD9Q9P2P6 4700 aa4.63□□□□□ -1.67
LSM3P3-201ENST00000436601 TGP01266 2768 aa4.63□□□□□ -1.67
LSM3P3-201ENST00000436601 APOMO95445 188 aa4.62□□□□□ -1.67
LSM3P3-201ENST00000436601 COX8AP10176 69 aa4.62□□□□□ -1.67
LSM3P3-201ENST00000436601 WFDC2Q14508 124 aa4.62□□□□□ -1.67
LSM3P3-201ENST00000436601 C6orf223Q8N319 242 aa4.62□□□□□ -1.67
LSM3P3-201ENST00000436601 COX7B2Q8TF08 81 aa4.62□□□□□ -1.67
LSM3P3-201ENST00000436601 LINC00526Q96FQ7 95 aa4.62□□□□□ -1.67
LSM3P3-201ENST00000436601 PRO1933Q9H354 126 aa4.62□□□□□ -1.67
LSM3P3-201ENST00000436601 CSMD3Q7Z407 3707 aa4.62□□□□□ -1.67
LSM3P3-201ENST00000436601 MYMXA0A1B0GTQ4 84 aa4.61□□□□□ -1.67
LSM3P3-201ENST00000436601 LRCOL1A6NCL2 159 aa4.61□□□□□ -1.67
LSM3P3-201ENST00000436601 LECT2O14960 151 aa4.61□□□□□ -1.67
LSM3P3-201ENST00000436601 LGALS3P17931 250 aaKnown RBP4.61□□□□□ -1.67
LSM3P3-201ENST00000436601 SPAG11BQ08648 103 aa4.61□□□□□ -1.67
LSM3P3-201ENST00000436601 HIGD2BQ4VC39 106 aa4.61□□□□□ -1.67
LSM3P3-201ENST00000436601 C6orf226Q5I0X4 101 aa4.61□□□□□ -1.67
LSM3P3-201ENST00000436601 C1orf134Q5TEV5 83 aa4.61□□□□□ -1.67
LSM3P3-201ENST00000436601 C2orf82Q6UX34 121 aa4.61□□□□□ -1.67
LSM3P3-201ENST00000436601 BOD1L2Q8IYS8 172 aa4.61□□□□□ -1.67
LSM3P3-201ENST00000436601 Q8IZM0 81 aa4.61□□□□□ -1.67
LSM3P3-201ENST00000436601 NTN5Q8WTR8 489 aaPredicted RBP4.61□□□□□ -1.67
LSM3P3-201ENST00000436601 ZNF625Q96I27 306 aaPredicted RBP4.61□□□□□ -1.67
LSM3P3-201ENST00000436601 KRTAP4-8Q9BYQ9 185 aa4.61□□□□□ -1.67
LSM3P3-201ENST00000436601 TOMM7Q9P0U1 55 aa4.61□□□□□ -1.67
LSM3P3-201ENST00000436601 DYNC2H1Q8NCM8 4307 aaKnown RBP4.61□□□□□ -1.67
LSM3P3-201ENST00000436601 GVQW2A0A096LPI5 108 aaPredicted RBP4.6□□□□□ -1.67
LSM3P3-201ENST00000436601 ZNF815PA8K554 130 aa4.6□□□□□ -1.67
LSM3P3-201ENST00000436601 NDUFA1O15239 70 aa4.6□□□□□ -1.67
LSM3P3-201ENST00000436601 DLEU1O43261 78 aa4.6□□□□□ -1.67
LSM3P3-201ENST00000436601 PSCAO43653 123 aa4.6□□□□□ -1.67
LSM3P3-201ENST00000436601 PRSS2P07478 247 aa4.6□□□□□ -1.67
LSM3P3-201ENST00000436601 KRTAP15-1Q3LI76 137 aa4.6□□□□□ -1.67
LSM3P3-201ENST00000436601 PRR26Q8N8Z3 221 aa4.6□□□□□ -1.67
LSM3P3-201ENST00000436601 NDUFA12Q9UI09 145 aa4.6□□□□□ -1.67
LSM3P3-201ENST00000436601 KRTAP9-6A0A140TA67 174 aa4.59□□□□□ -1.67
LSM3P3-201ENST00000436601 KRTAP9-7A8MTY7 169 aa4.59□□□□□ -1.67
LSM3P3-201ENST00000436601 SLPIP03973 132 aa4.59□□□□□ -1.67
LSM3P3-201ENST00000436601 SLC25A34Q6PIV7 304 aa4.59□□□□□ -1.67
LSM3P3-201ENST00000436601 UNQ6190/PRO20217Q6UXQ8 127 aa4.59□□□□□ -1.67
LSM3P3-201ENST00000436601 MIEN1Q9BRT3 115 aa4.59□□□□□ -1.67
LSM3P3-201ENST00000436601 A0A087WTM6 91 aa4.58□□□□□ -1.68
LSM3P3-201ENST00000436601 IGLV5-52A0A0A0MRZ9 124 aa4.58□□□□□ -1.68
LSM3P3-201ENST00000436601 A0A0J9YXY3 114 aa4.58□□□□□ -1.68
LSM3P3-201ENST00000436601 RTL8CO15255 209 aa4.58□□□□□ -1.68
LSM3P3-201ENST00000436601 CKS1BP61024 79 aa4.58□□□□□ -1.68
LSM3P3-201ENST00000436601 C2orf91Q6ZV80 131 aa4.58□□□□□ -1.68
LSM3P3-201ENST00000436601 C2orf48Q96LS8 159 aa4.58□□□□□ -1.68
LSM3P3-201ENST00000436601 UQCR10Q9UDW1 63 aa4.58□□□□□ -1.68
LSM3P3-201ENST00000436601 DNAH7Q8WXX0 4024 aa4.58□□□□□ -1.68
LSM3P3-201ENST00000436601 TENM2Q9NT68 2774 aa4.58□□□□□ -1.68
LSM3P3-201ENST00000436601 PLECQ15149 4684 aaKnown RBP4.57□□□□□ -1.68
LSM3P3-201ENST00000436601 F8WDY8 70 aa4.57□□□□□ -1.68
LSM3P3-201ENST00000436601 TSTD3H0UI37 97 aa4.57□□□□□ -1.68
LSM3P3-201ENST00000436601 CXCL5P42830 114 aa4.57□□□□□ -1.68
LSM3P3-201ENST00000436601 HERV-K104P63124 156 aa4.57□□□□□ -1.68
LSM3P3-201ENST00000436601 ADAMTSL4-AS1Q5T5F5 129 aa4.57□□□□□ -1.68
LSM3P3-201ENST00000436601 SFTA2Q6UW10 78 aa4.57□□□□□ -1.68
LSM3P3-201ENST00000436601 Q6ZRU5 148 aa4.57□□□□□ -1.68
LSM3P3-201ENST00000436601 CAMK2N2Q96S95 79 aa4.57□□□□□ -1.68
LSM3P3-201ENST00000436601 LITAFQ99732 161 aa4.57□□□□□ -1.68
LSM3P3-201ENST00000436601 C6orf48Q9UBA6 75 aa4.57□□□□□ -1.68
LSM3P3-201ENST00000436601 IGLV5-37A0A075B6J1 123 aa4.56□□□□□ -1.68
LSM3P3-201ENST00000436601 SYCNQ0VAF6 134 aa4.56□□□□□ -1.68
LSM3P3-201ENST00000436601 LBHQ53QV2 105 aaPredicted RBP4.56□□□□□ -1.68
LSM3P3-201ENST00000436601 C9orf116Q5BN46 136 aaPredicted RBP4.56□□□□□ -1.68
LSM3P3-201ENST00000436601 SCGB1D4Q6XE38 83 aa4.56□□□□□ -1.68
LSM3P3-201ENST00000436601 Q8N814 137 aa4.56□□□□□ -1.68
LSM3P3-201ENST00000436601 HIGD1BQ9P298 99 aa4.56□□□□□ -1.68
LSM3P3-201ENST00000436601 ERG28Q9UKR5 140 aa4.56□□□□□ -1.68
LSM3P3-201ENST00000436601 TRBV30A0A0K0K1B3 111 aa4.55□□□□□ -1.68
LSM3P3-201ENST00000436601 A0A0U1RRA0 63 aa4.55□□□□□ -1.68
LSM3P3-201ENST00000436601 TIMM17BO60830 172 aa4.55□□□□□ -1.68
LSM3P3-201ENST00000436601 SMIM13P0DJ93 91 aa4.55□□□□□ -1.68
LSM3P3-201ENST00000436601 DDTP30046 118 aa4.55□□□□□ -1.68
LSM3P3-201ENST00000436601 PFN2P35080 140 aa4.55□□□□□ -1.68
LSM3P3-201ENST00000436601 CNBPP62633 177 aaKnown RBP4.55□□□□□ -1.68
LSM3P3-201ENST00000436601 C14orf177Q52M58 125 aa4.55□□□□□ -1.68
LSM3P3-201ENST00000436601 LCE4AQ5TA78 99 aa4.55□□□□□ -1.68
LSM3P3-201ENST00000436601 DNAH1Q9P2D7 4330 aa4.55□□□□□ -1.68
LSM3P3-201ENST00000436601 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.54□□□□□ -1.68
LSM3P3-201ENST00000436601 HNRNPA3P51991 378 aaKnown RBP4.54□□□□□ -1.68
LSM3P3-201ENST00000436601 LINC00158P58513 81 aa4.54□□□□□ -1.68
LSM3P3-201ENST00000436601 MEIG1Q5JSS6 88 aa4.54□□□□□ -1.68
LSM3P3-201ENST00000436601 DAND5Q8N907 189 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms