RNA–Protein interactions for RNA: ENST00000430687.1

CDC42EP1-203, Transcript of CDC42 effector protein 1, humanhuman

APPRIS ALT2 TSL 3

Gene CDC42EP1, Length 720 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-203ENST00000430687 LINC01545Q5VT33 79 aa11.67□□□□□ -0.54
CDC42EP1-203ENST00000430687 HIST1H2BLQ99880 126 aa11.67□□□□□ -0.54
CDC42EP1-203ENST00000430687 TRBV30A0A0K0K1B3 111 aa11.66□□□□□ -0.54
CDC42EP1-203ENST00000430687 KRTDAPP60985 99 aa11.66□□□□□ -0.54
CDC42EP1-203ENST00000430687 PKHD1P08F94 4074 aa11.65□□□□□ -0.54
CDC42EP1-203ENST00000430687 UNQ6190/PRO20217Q6UXQ8 127 aa11.65□□□□□ -0.54
CDC42EP1-203ENST00000430687 Q6ZSA8 131 aa11.65□□□□□ -0.54
CDC42EP1-203ENST00000430687 CDK2AP2O75956 126 aa11.64□□□□□ -0.55
CDC42EP1-203ENST00000430687 C10orf25Q5T742 122 aa11.64□□□□□ -0.55
CDC42EP1-203ENST00000430687 C2orf82Q6UX34 121 aa11.64□□□□□ -0.55
CDC42EP1-203ENST00000430687 PMCHL2Q9BQD1 86 aa11.64□□□□□ -0.55
CDC42EP1-203ENST00000430687 C20orf202A1L168 122 aa11.63□□□□□ -0.55
CDC42EP1-203ENST00000430687 AKR1D1P51857 326 aa11.63□□□□□ -0.55
CDC42EP1-203ENST00000430687 C6orf48Q9UBA6 75 aa11.63□□□□□ -0.55
CDC42EP1-203ENST00000430687 DYNC1H1Q14204 4646 aaKnown RBP11.63□□□□□ -0.55
CDC42EP1-203ENST00000430687 DNAH5Q8TE73 4624 aa11.62□□□□□ -0.55
CDC42EP1-203ENST00000430687 LOC107984640A0A0U1RRK4 108 aa11.62□□□□□ -0.55
CDC42EP1-203ENST00000430687 SFTA2Q6UW10 78 aa11.62□□□□□ -0.55
CDC42EP1-203ENST00000430687 TLX1NBP0CAT3 122 aa11.61□□□□□ -0.55
CDC42EP1-203ENST00000430687 HERVK_113P61574 105 aa11.61□□□□□ -0.55
CDC42EP1-203ENST00000430687 FAM30AQ9NZY2 134 aa11.61□□□□□ -0.55
CDC42EP1-203ENST00000430687 LINC00474Q9P2X8 69 aa11.6□□□□□ -0.55
CDC42EP1-203ENST00000430687 CIRBPQ14011 172 aaKnown RBP11.59□□□□□ -0.55
CDC42EP1-203ENST00000430687 LEPROTO15243 131 aa11.57□□□□□ -0.56
CDC42EP1-203ENST00000430687 XGP55808 180 aa11.57□□□□□ -0.56
CDC42EP1-203ENST00000430687 PLEKHB2Q96CS7 222 aa11.57□□□□□ -0.56
CDC42EP1-203ENST00000430687 A0A096LNI7 61 aa11.56□□□□□ -0.56
CDC42EP1-203ENST00000430687 NDUFC2-KCTD14E9PQ53 114 aa11.56□□□□□ -0.56
CDC42EP1-203ENST00000430687 PTTG1IPP53801 180 aa11.56□□□□□ -0.56
CDC42EP1-203ENST00000430687 SPACA4Q8TDM5 124 aa11.56□□□□□ -0.56
CDC42EP1-203ENST00000430687 LRP1BQ9NZR2 4599 aa11.56□□□□□ -0.56
CDC42EP1-203ENST00000430687 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.56□□□□□ -0.56
CDC42EP1-203ENST00000430687 ZNF625Q96I27 306 aaPredicted RBP11.55□□□□□ -0.56
CDC42EP1-203ENST00000430687 E9PLD3 99 aa11.54□□□□□ -0.56
CDC42EP1-203ENST00000430687 RPL18AQ02543 176 aaKnown RBP11.54□□□□□ -0.56
CDC42EP1-203ENST00000430687 GAGE2BQ13066 116 aa11.54□□□□□ -0.56
CDC42EP1-203ENST00000430687 C9orf116Q5BN46 136 aaPredicted RBP11.54□□□□□ -0.56
CDC42EP1-203ENST00000430687 Q6ZRP5 223 aa11.54□□□□□ -0.56
CDC42EP1-203ENST00000430687 IGKV2-24A0A0C4DH68 120 aa11.53□□□□□ -0.56
CDC42EP1-203ENST00000430687 PANO1I0J062 215 aa11.53□□□□□ -0.56
CDC42EP1-203ENST00000430687 J3QQQ9 107 aa11.53□□□□□ -0.56
CDC42EP1-203ENST00000430687 CHTF8P0CG12 524 aa11.53□□□□□ -0.56
CDC42EP1-203ENST00000430687 HERV-K104P63124 156 aa11.53□□□□□ -0.56
CDC42EP1-203ENST00000430687 DPH3Q96FX2 82 aa11.53□□□□□ -0.56
CDC42EP1-203ENST00000430687 KRTAP17-1Q9BYP8 105 aa11.53□□□□□ -0.56
CDC42EP1-203ENST00000430687 NMUP48645 174 aa11.52□□□□□ -0.57
CDC42EP1-203ENST00000430687 COX17Q14061 63 aa11.52□□□□□ -0.57
CDC42EP1-203ENST00000430687 MAJINQ3KP22 176 aa11.52□□□□□ -0.57
CDC42EP1-203ENST00000430687 SCXQ7RTU7 201 aa11.52□□□□□ -0.57
CDC42EP1-203ENST00000430687 CIRBP-AS1Q8TBR5 109 aa11.52□□□□□ -0.57
CDC42EP1-203ENST00000430687 TMA7Q9Y2S6 64 aaKnown RBP11.52□□□□□ -0.57
CDC42EP1-203ENST00000430687 MYMXA0A1B0GTQ4 84 aa11.51□□□□□ -0.57
CDC42EP1-203ENST00000430687 LGALS3P17931 250 aaKnown RBP11.51□□□□□ -0.57
CDC42EP1-203ENST00000430687 STPG4Q8N801 248 aa11.51□□□□□ -0.57
CDC42EP1-203ENST00000430687 NDUFA12Q9UI09 145 aa11.51□□□□□ -0.57
CDC42EP1-203ENST00000430687 LINC00587B1AMM8 73 aa11.5□□□□□ -0.57
CDC42EP1-203ENST00000430687 PLAC8Q9NZF1 115 aa11.5□□□□□ -0.57
CDC42EP1-203ENST00000430687 ERG28Q9UKR5 140 aa11.5□□□□□ -0.57
CDC42EP1-203ENST00000430687 A0A087WYN8 130 aa11.49□□□□□ -0.57
CDC42EP1-203ENST00000430687 TSPEAR-AS2P59090 65 aa11.49□□□□□ -0.57
CDC42EP1-203ENST00000430687 GAGE2EQ4V326 116 aa11.49□□□□□ -0.57
CDC42EP1-203ENST00000430687 GAGE2DQ9UEU5 116 aa11.49□□□□□ -0.57
CDC42EP1-203ENST00000430687 EPM2AB3EWF7 344 aa11.47□□□□□ -0.57
CDC42EP1-203ENST00000430687 ATOH7Q8N100 152 aa11.47□□□□□ -0.57
CDC42EP1-203ENST00000430687 DNAH8Q96JB1 4490 aa11.47□□□□□ -0.57
CDC42EP1-203ENST00000430687 SCGB1D1O95968 90 aa11.46□□□□□ -0.57
CDC42EP1-203ENST00000430687 PFN2P35080 140 aa11.46□□□□□ -0.57
CDC42EP1-203ENST00000430687 HAMPP81172 84 aa11.46□□□□□ -0.57
CDC42EP1-203ENST00000430687 KIAA1109Q2LD37 5005 aa11.45□□□□□ -0.58
CDC42EP1-203ENST00000430687 C9orf129Q5T035 196 aaKnown RBP11.44□□□□□ -0.58
CDC42EP1-203ENST00000430687 APOBP04114 4563 aaKnown RBP11.44□□□□□ -0.58
CDC42EP1-203ENST00000430687 RYR1P21817 5038 aa11.43□□□□□ -0.58
CDC42EP1-203ENST00000430687 IGKV2D-26A0A0A0MRZ7 120 aa11.43□□□□□ -0.58
CDC42EP1-203ENST00000430687 HSBP1L1C9JCN9 74 aa11.43□□□□□ -0.58
CDC42EP1-203ENST00000430687 LINC00158P58513 81 aa11.43□□□□□ -0.58
CDC42EP1-203ENST00000430687 MEIG1Q5JSS6 88 aa11.43□□□□□ -0.58
CDC42EP1-203ENST00000430687 A0A1W2PNN7 141 aa11.42□□□□□ -0.58
CDC42EP1-203ENST00000430687 ANKRD39Q53RE8 183 aa11.42□□□□□ -0.58
CDC42EP1-203ENST00000430687 XAGE1AQ9HD64 81 aa11.42□□□□□ -0.58
CDC42EP1-203ENST00000430687 JOSD1Q15040 202 aaPredicted RBP11.41□□□□□ -0.58
CDC42EP1-203ENST00000430687 SMIM13P0DJ93 91 aa11.4□□□□□ -0.58
CDC42EP1-203ENST00000430687 Q8N1X5 172 aa11.4□□□□□ -0.58
CDC42EP1-203ENST00000430687 SND1-IT1Q9HBX3 110 aa11.4□□□□□ -0.58
CDC42EP1-203ENST00000430687 PLA2G2DQ9UNK4 145 aa11.4□□□□□ -0.58
CDC42EP1-203ENST00000430687 A0A0J9YXY3 114 aa11.39□□□□□ -0.59
CDC42EP1-203ENST00000430687 ZNF815PA8K554 130 aa11.39□□□□□ -0.59
CDC42EP1-203ENST00000430687 SMR3BP02814 79 aaPredicted RBP11.39□□□□□ -0.59
CDC42EP1-203ENST00000430687 FAM168BA1KXE4 195 aa11.38□□□□□ -0.59
CDC42EP1-203ENST00000430687 FAM229AH3BQW9 127 aa11.38□□□□□ -0.59
CDC42EP1-203ENST00000430687 A0A0U1RRA0 63 aa11.37□□□□□ -0.59
CDC42EP1-203ENST00000430687 LINC00528Q8N1L1 170 aa11.37□□□□□ -0.59
CDC42EP1-203ENST00000430687 MIR7-3HGQ8N6C7 128 aa11.37□□□□□ -0.59
CDC42EP1-203ENST00000430687 C7orf33Q8WU49 177 aa11.37□□□□□ -0.59
CDC42EP1-203ENST00000430687 TIMM17BO60830 172 aa11.36□□□□□ -0.59
CDC42EP1-203ENST00000430687 FAM19A5Q7Z5A7 132 aaPredicted RBP11.36□□□□□ -0.59
CDC42EP1-203ENST00000430687 KRTAP7-1Q8IUC3 87 aa11.36□□□□□ -0.59
CDC42EP1-203ENST00000430687 TTTY13Q9BZ97 58 aa11.35□□□□□ -0.59
CDC42EP1-203ENST00000430687 SERTAD4-AS1Q5TG53 156 aa11.34□□□□□ -0.59
CDC42EP1-203ENST00000430687 TP73-AS1Q9UF72 201 aa11.34□□□□□ -0.59
CDC42EP1-203ENST00000430687 HSPG2P98160 4391 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms