RNA–Protein interactions for RNA: ENST00000430321.5

UBR3-204, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 5

Gene UBR3, Length 5,411 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-204ENST00000430321 LINC00526Q96FQ7 95 aa4.08□□□□□ -1.76
UBR3-204ENST00000430321 MED12Q93074 2177 aa4.07□□□□□ -1.76
UBR3-204ENST00000430321 HCG22E2RYF7 251 aa4.07□□□□□ -1.76
UBR3-204ENST00000430321 PKDREJQ9NTG1 2253 aa4.07□□□□□ -1.76
UBR3-204ENST00000430321 PLA2G2DQ9UNK4 145 aa4.07□□□□□ -1.76
UBR3-204ENST00000430321 ATG2AQ2TAZ0 1938 aa4.07□□□□□ -1.76
UBR3-204ENST00000430321 MOBPQ13875 183 aa4.07□□□□□ -1.76
UBR3-204ENST00000430321 COX6B2Q6YFQ2 88 aa4.07□□□□□ -1.76
UBR3-204ENST00000430321 AKAP6Q13023 2319 aa4.06□□□□□ -1.76
UBR3-204ENST00000430321 IGLV5-45A0A087WSX0 123 aa4.06□□□□□ -1.76
UBR3-204ENST00000430321 LINC00167Q96N53 147 aa4.06□□□□□ -1.76
UBR3-204ENST00000430321 LINC00304Q8N9R0 145 aa4.06□□□□□ -1.76
UBR3-204ENST00000430321 SPTBN2O15020 2390 aa4.06□□□□□ -1.76
UBR3-204ENST00000430321 CREBBPQ92793 2442 aa4.06□□□□□ -1.76
UBR3-204ENST00000430321 ZFHX2Q9C0A1 2572 aaPredicted RBP4.06□□□□□ -1.76
UBR3-204ENST00000430321 LINC00313P59037 77 aa4.06□□□□□ -1.76
UBR3-204ENST00000430321 Q6Q795 121 aa4.06□□□□□ -1.76
UBR3-204ENST00000430321 A0A087WSZ3 146 aa4.06□□□□□ -1.76
UBR3-204ENST00000430321 A0A096LNT2 108 aa4.05□□□□□ -1.76
UBR3-204ENST00000430321 EPM2AB3EWF7 344 aa4.05□□□□□ -1.76
UBR3-204ENST00000430321 LINC00694P0DN24 101 aa4.05□□□□□ -1.76
UBR3-204ENST00000430321 SPACA4Q8TDM5 124 aa4.05□□□□□ -1.76
UBR3-204ENST00000430321 ANKHD1Q8IWZ3 2542 aaKnown RBP4.05□□□□□ -1.76
UBR3-204ENST00000430321 ELOF1P60002 83 aaKnown RBP4.05□□□□□ -1.76
UBR3-204ENST00000430321 Q6ZRX8 168 aa4.05□□□□□ -1.76
UBR3-204ENST00000430321 IGHV3OR16-9A0A0B4J2B5 98 aa4.04□□□□□ -1.76
UBR3-204ENST00000430321 TLX1NBP0CAT3 122 aa4.04□□□□□ -1.76
UBR3-204ENST00000430321 WFDC2Q14508 124 aa4.04□□□□□ -1.76
UBR3-204ENST00000430321 RBM12B-AS1Q9P1G2 102 aa4.04□□□□□ -1.76
UBR3-204ENST00000430321 SPTBN1Q01082 2364 aaKnown RBP4.04□□□□□ -1.76
UBR3-204ENST00000430321 IGLV1-50A0A075B6I6 118 aa4.04□□□□□ -1.76
UBR3-204ENST00000430321 TANC2Q9HCD6 1990 aa4.04□□□□□ -1.76
UBR3-204ENST00000430321 H0Y9P7 68 aa4.04□□□□□ -1.76
UBR3-204ENST00000430321 ACYP2P14621 99 aa4.04□□□□□ -1.76
UBR3-204ENST00000430321 PRR4Q16378 134 aa4.04□□□□□ -1.76
UBR3-204ENST00000430321 TTTY13Q9BZ97 58 aa4.04□□□□□ -1.76
UBR3-204ENST00000430321 A0A087WTM6 91 aa4.04□□□□□ -1.76
UBR3-204ENST00000430321 SDIM1Q6ZPB5 146 aa4.04□□□□□ -1.76
UBR3-204ENST00000430321 MAPKAPK5-AS1Q8N8E1 139 aa4.04□□□□□ -1.76
UBR3-204ENST00000430321 WNK2Q9Y3S1 2297 aa4.03□□□□□ -1.76
UBR3-204ENST00000430321 SCXQ7RTU7 201 aa4.03□□□□□ -1.76
UBR3-204ENST00000430321 PTPRQQ9UMZ3 2332 aa4.03□□□□□ -1.76
UBR3-204ENST00000430321 PRLHP81277 87 aa4.03□□□□□ -1.76
UBR3-204ENST00000430321 C6orf48Q9UBA6 75 aa4.03□□□□□ -1.76
UBR3-204ENST00000430321 PSORS1C2Q9UIG4 136 aa4.03□□□□□ -1.76
UBR3-204ENST00000430321 KRTAP21-3Q3LHN1 58 aa4.03□□□□□ -1.76
UBR3-204ENST00000430321 LINC00612Q8N6U2 182 aa4.03□□□□□ -1.76
UBR3-204ENST00000430321 C7orf65Q6ZTY9 151 aa4.03□□□□□ -1.76
UBR3-204ENST00000430321 APLNQ9ULZ1 77 aa4.03□□□□□ -1.76
UBR3-204ENST00000430321 PTPRBP23467 1997 aa4.02□□□□□ -1.77
UBR3-204ENST00000430321 LOC101927531A0A1B0GV80 90 aa4.02□□□□□ -1.77
UBR3-204ENST00000430321 ZNF575Q86XF7 245 aa4.02□□□□□ -1.77
UBR3-204ENST00000430321 KIAA0087Q14695 138 aa4.02□□□□□ -1.77
UBR3-204ENST00000430321 FAM208BQ5VWN6 2430 aa4.02□□□□□ -1.77
UBR3-204ENST00000430321 EXPH5Q8NEV8 1989 aa4.02□□□□□ -1.77
UBR3-204ENST00000430321 TRAV22A0A0B4J277 110 aa4.02□□□□□ -1.77
UBR3-204ENST00000430321 ZNF861PO60384 105 aa4.02□□□□□ -1.77
UBR3-204ENST00000430321 CDIP1Q9H305 208 aa4.02□□□□□ -1.77
UBR3-204ENST00000430321 WIPF1O43516 503 aa4.01□□□□□ -1.77
UBR3-204ENST00000430321 CNBPP62633 177 aaKnown RBP4.01□□□□□ -1.77
UBR3-204ENST00000430321 LINC00208Q96KT6 92 aa4.01□□□□□ -1.77
UBR3-204ENST00000430321 LINC01547P58512 204 aaPredicted RBP4.01□□□□□ -1.77
UBR3-204ENST00000430321 KRTAP10-11P60412 298 aa4.01□□□□□ -1.77
UBR3-204ENST00000430321 POLEQ07864 2286 aa4.01□□□□□ -1.77
UBR3-204ENST00000430321 TRBV7-4A0A0J9YYF1 115 aa4□□□□□ -1.77
UBR3-204ENST00000430321 LINC00476Q8WZB0 136 aa4□□□□□ -1.77
UBR3-204ENST00000430321 NCOA6Q14686 2063 aaPredicted RBP4□□□□□ -1.77
UBR3-204ENST00000430321 LOC110117498A0A087WWA1 95 aa4□□□□□ -1.77
UBR3-204ENST00000430321 SPINK1P00995 79 aa4□□□□□ -1.77
UBR3-204ENST00000430321 COX7CP15954 63 aa4□□□□□ -1.77
UBR3-204ENST00000430321 CD164Q04900 197 aa4□□□□□ -1.77
UBR3-204ENST00000430321 PRM2P04554 102 aa4□□□□□ -1.77
UBR3-204ENST00000430321 PHF5AQ7RTV0 110 aaKnown RBP4□□□□□ -1.77
UBR3-204ENST00000430321 FREM1Q5H8C1 2179 aa4□□□□□ -1.77
UBR3-204ENST00000430321 GVINP1Q7Z2Y8 2422 aa4□□□□□ -1.77
UBR3-204ENST00000430321 EML5Q05BV3 1969 aa3.99□□□□□ -1.77
UBR3-204ENST00000430321 A6NED7 52 aa3.99□□□□□ -1.77
UBR3-204ENST00000430321 PCNX1Q96RV3 2341 aa3.99□□□□□ -1.77
UBR3-204ENST00000430321 KIAA1549Q9HCM3 1950 aa3.99□□□□□ -1.77
UBR3-204ENST00000430321 CSNK1G2-AS1Q8NCQ2 148 aa3.99□□□□□ -1.77
UBR3-204ENST00000430321 YPEL4Q96NS1 127 aa3.99□□□□□ -1.77
UBR3-204ENST00000430321 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.98□□□□□ -1.772e-7■■■■■ 29.3
UBR3-204ENST00000430321 CADP27708 2225 aa3.98□□□□□ -1.77
UBR3-204ENST00000430321 LINC00528Q8N1L1 170 aa3.98□□□□□ -1.77
UBR3-204ENST00000430321 NAV3Q8IVL0 2385 aa3.98□□□□□ -1.77
UBR3-204ENST00000430321 IGKV2D-30A0A075B6S6 120 aa3.98□□□□□ -1.77
UBR3-204ENST00000430321 TRBV7-7A0A0K0K1E9 115 aa3.98□□□□□ -1.77
UBR3-204ENST00000430321 IGKV2-30P06310 120 aa3.98□□□□□ -1.77
UBR3-204ENST00000430321 PRR34Q9NV39 138 aa3.98□□□□□ -1.77
UBR3-204ENST00000430321 SMIM26A0A096LP01 95 aa3.98□□□□□ -1.77
UBR3-204ENST00000430321 FAM229BQ4G0N7 80 aa3.98□□□□□ -1.77
UBR3-204ENST00000430321 A0A087WYN8 130 aa3.97□□□□□ -1.77
UBR3-204ENST00000430321 IGLV7-43P04211 117 aa3.97□□□□□ -1.77
UBR3-204ENST00000430321 C1orf64Q8NEQ6 169 aa3.97□□□□□ -1.77
UBR3-204ENST00000430321 Q96NJ1 140 aa3.97□□□□□ -1.77
UBR3-204ENST00000430321 KCNQ1DNQ9H478 68 aa3.97□□□□□ -1.77
UBR3-204ENST00000430321 ST20-AS1Q8NBB2 130 aa3.97□□□□□ -1.77
UBR3-204ENST00000430321 MT-ATP8P03928 68 aa3.97□□□□□ -1.77
UBR3-204ENST00000430321 C2orf91Q6ZV80 131 aa3.96□□□□□ -1.77
UBR3-204ENST00000430321 TMEM254Q8TBM7 123 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 141.3 ms