RNA–Protein interactions for RNA: ENST00000428017.5

VARS2-203, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 1,103 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-203ENST00000428017 C2orf82Q6UX34 121 aa9.78□□□□□ -0.84
VARS2-203ENST00000428017 UNQ6190/PRO20217Q6UXQ8 127 aa9.78□□□□□ -0.84
VARS2-203ENST00000428017 TMA7Q9Y2S6 64 aaKnown RBP9.78□□□□□ -0.84
VARS2-203ENST00000428017 TRBV30A0A0K0K1B3 111 aa9.77□□□□□ -0.85
VARS2-203ENST00000428017 AKR1D1P51857 326 aa9.76□□□□□ -0.85
VARS2-203ENST00000428017 C10orf25Q5T742 122 aa9.76□□□□□ -0.85
VARS2-203ENST00000428017 SDIM1Q6ZPB5 146 aa9.76□□□□□ -0.85
VARS2-203ENST00000428017 PKD1P98161 4303 aa9.76□□□□□ -0.85
VARS2-203ENST00000428017 LOC107984640A0A0U1RRK4 108 aa9.75□□□□□ -0.85
VARS2-203ENST00000428017 SFTA2Q6UW10 78 aa9.75□□□□□ -0.85
VARS2-203ENST00000428017 DPH3Q96FX2 82 aa9.75□□□□□ -0.85
VARS2-203ENST00000428017 C6orf48Q9UBA6 75 aa9.75□□□□□ -0.85
VARS2-203ENST00000428017 RPL18AQ02543 176 aaKnown RBP9.74□□□□□ -0.85
VARS2-203ENST00000428017 HECTD4Q9Y4D8 3996 aa9.73□□□□□ -0.85
VARS2-203ENST00000428017 GAGE2BQ13066 116 aa9.73□□□□□ -0.85
VARS2-203ENST00000428017 PLEKHB2Q96CS7 222 aa9.73□□□□□ -0.85
VARS2-203ENST00000428017 LINC00474Q9P2X8 69 aa9.73□□□□□ -0.85
VARS2-203ENST00000428017 IGKV2-24A0A0C4DH68 120 aa9.72□□□□□ -0.85
VARS2-203ENST00000428017 LEPROTO15243 131 aa9.72□□□□□ -0.85
VARS2-203ENST00000428017 DNAH11Q96DT5 4516 aa9.72□□□□□ -0.85
VARS2-203ENST00000428017 CDK2AP2O75956 126 aa9.71□□□□□ -0.86
VARS2-203ENST00000428017 FAM30AQ9NZY2 134 aa9.71□□□□□ -0.86
VARS2-203ENST00000428017 A0A096LNI7 61 aa9.7□□□□□ -0.86
VARS2-203ENST00000428017 NDUFC2-KCTD14E9PQ53 114 aa9.7□□□□□ -0.86
VARS2-203ENST00000428017 TLX1NBP0CAT3 122 aa9.7□□□□□ -0.86
VARS2-203ENST00000428017 LGALS3P17931 250 aaKnown RBP9.7□□□□□ -0.86
VARS2-203ENST00000428017 C9orf116Q5BN46 136 aaPredicted RBP9.7□□□□□ -0.86
VARS2-203ENST00000428017 Q6ZSA8 131 aa9.7□□□□□ -0.86
VARS2-203ENST00000428017 EPPK1P58107 5090 aaKnown RBP9.69□□□□□ -0.86
VARS2-203ENST00000428017 E9PLD3 99 aa9.69□□□□□ -0.86
VARS2-203ENST00000428017 J3QQQ9 107 aa9.69□□□□□ -0.86
VARS2-203ENST00000428017 CHTF8P0CG12 524 aa9.69□□□□□ -0.86
VARS2-203ENST00000428017 PTTG1IPP53801 180 aa9.69□□□□□ -0.86
VARS2-203ENST00000428017 MAJINQ3KP22 176 aa9.69□□□□□ -0.86
VARS2-203ENST00000428017 GAGE2EQ4V326 116 aa9.69□□□□□ -0.86
VARS2-203ENST00000428017 ATOH7Q8N100 152 aa9.69□□□□□ -0.86
VARS2-203ENST00000428017 GAGE2DQ9UEU5 116 aa9.69□□□□□ -0.86
VARS2-203ENST00000428017 NDUFA12Q9UI09 145 aa9.69□□□□□ -0.86
VARS2-203ENST00000428017 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.69□□□□□ -0.86
VARS2-203ENST00000428017 MYMXA0A1B0GTQ4 84 aa9.68□□□□□ -0.86
VARS2-203ENST00000428017 SCGB1D1O95968 90 aa9.68□□□□□ -0.86
VARS2-203ENST00000428017 STPG4Q8N801 248 aa9.68□□□□□ -0.86
VARS2-203ENST00000428017 ZNF625Q96I27 306 aaPredicted RBP9.68□□□□□ -0.86
VARS2-203ENST00000428017 HERV-K104P63124 156 aa9.67□□□□□ -0.86
VARS2-203ENST00000428017 SPACA4Q8TDM5 124 aa9.67□□□□□ -0.86
VARS2-203ENST00000428017 HSBP1L1C9JCN9 74 aa9.66□□□□□ -0.86
VARS2-203ENST00000428017 PANO1I0J062 215 aa9.66□□□□□ -0.86
VARS2-203ENST00000428017 PFN2P35080 140 aa9.66□□□□□ -0.86
VARS2-203ENST00000428017 NMUP48645 174 aa9.66□□□□□ -0.86
VARS2-203ENST00000428017 HAMPP81172 84 aa9.66□□□□□ -0.86
VARS2-203ENST00000428017 Q6ZRP5 223 aa9.66□□□□□ -0.86
VARS2-203ENST00000428017 SCXQ7RTU7 201 aa9.66□□□□□ -0.86
VARS2-203ENST00000428017 ERG28Q9UKR5 140 aa9.66□□□□□ -0.86
VARS2-203ENST00000428017 TSPEAR-AS2P59090 65 aa9.65□□□□□ -0.86
VARS2-203ENST00000428017 CIRBPQ14011 172 aaKnown RBP9.65□□□□□ -0.86
VARS2-203ENST00000428017 MEIG1Q5JSS6 88 aa9.65□□□□□ -0.86
VARS2-203ENST00000428017 CIRBP-AS1Q8TBR5 109 aa9.65□□□□□ -0.86
VARS2-203ENST00000428017 PKHD1P08F94 4074 aa9.64□□□□□ -0.87
VARS2-203ENST00000428017 LINC00587B1AMM8 73 aa9.64□□□□□ -0.87
VARS2-203ENST00000428017 XGP55808 180 aa9.64□□□□□ -0.87
VARS2-203ENST00000428017 COX17Q14061 63 aa9.64□□□□□ -0.87
VARS2-203ENST00000428017 A0A087WYN8 130 aa9.63□□□□□ -0.87
VARS2-203ENST00000428017 LINC00158P58513 81 aa9.63□□□□□ -0.87
VARS2-203ENST00000428017 XAGE1AQ9HD64 81 aa9.62□□□□□ -0.87
VARS2-203ENST00000428017 DYNC1H1Q14204 4646 aaKnown RBP9.61□□□□□ -0.87
VARS2-203ENST00000428017 DNAH5Q8TE73 4624 aa9.61□□□□□ -0.87
VARS2-203ENST00000428017 PLAC8Q9NZF1 115 aa9.61□□□□□ -0.87
VARS2-203ENST00000428017 IGKV2D-26A0A0A0MRZ7 120 aa9.6□□□□□ -0.87
VARS2-203ENST00000428017 A0A0U1RRA0 63 aa9.6□□□□□ -0.87
VARS2-203ENST00000428017 ANKRD39Q53RE8 183 aa9.6□□□□□ -0.87
VARS2-203ENST00000428017 ZNF815PA8K554 130 aa9.59□□□□□ -0.87
VARS2-203ENST00000428017 SMIM13P0DJ93 91 aa9.59□□□□□ -0.87
VARS2-203ENST00000428017 LRP1BQ9NZR2 4599 aa9.59□□□□□ -0.87
VARS2-203ENST00000428017 SMR3BP02814 79 aaPredicted RBP9.58□□□□□ -0.88
VARS2-203ENST00000428017 C9orf129Q5T035 196 aaKnown RBP9.58□□□□□ -0.88
VARS2-203ENST00000428017 FAM19A5Q7Z5A7 132 aaPredicted RBP9.58□□□□□ -0.88
VARS2-203ENST00000428017 A0A1W2PNN7 141 aa9.57□□□□□ -0.88
VARS2-203ENST00000428017 JOSD1Q15040 202 aaPredicted RBP9.57□□□□□ -0.88
VARS2-203ENST00000428017 C7orf33Q8WU49 177 aa9.57□□□□□ -0.88
VARS2-203ENST00000428017 SND1-IT1Q9HBX3 110 aa9.57□□□□□ -0.88
VARS2-203ENST00000428017 BIRC6Q9NR09 4857 aa9.56□□□□□ -0.88
VARS2-203ENST00000428017 A0A0J9YXY3 114 aa9.56□□□□□ -0.88
VARS2-203ENST00000428017 FAM168BA1KXE4 195 aa9.56□□□□□ -0.88
VARS2-203ENST00000428017 SCGB1D4Q6XE38 83 aa9.56□□□□□ -0.88
VARS2-203ENST00000428017 FAM229AH3BQW9 127 aa9.55□□□□□ -0.88
VARS2-203ENST00000428017 LINC00528Q8N1L1 170 aa9.55□□□□□ -0.88
VARS2-203ENST00000428017 MIR7-3HGQ8N6C7 128 aa9.55□□□□□ -0.88
VARS2-203ENST00000428017 TTTY13Q9BZ97 58 aa9.55□□□□□ -0.88
VARS2-203ENST00000428017 M0QXV9 152 aa9.53□□□□□ -0.88
VARS2-203ENST00000428017 PCP2Q8IVA1 136 aa9.53□□□□□ -0.88
VARS2-203ENST00000428017 MIEN1Q9BRT3 115 aa9.53□□□□□ -0.88
VARS2-203ENST00000428017 VAMP8Q9BV40 100 aa9.53□□□□□ -0.88
VARS2-203ENST00000428017 RPL24P83731 157 aaKnown RBP9.52□□□□□ -0.89
VARS2-203ENST00000428017 SERTAD4-AS1Q5TG53 156 aa9.52□□□□□ -0.89
VARS2-203ENST00000428017 Q8N1X5 172 aa9.52□□□□□ -0.89
VARS2-203ENST00000428017 DAND5Q8N907 189 aa9.52□□□□□ -0.89
VARS2-203ENST00000428017 NKAPP1Q8N9T2 125 aa9.52□□□□□ -0.89
VARS2-203ENST00000428017 PLA2G2DQ9UNK4 145 aa9.52□□□□□ -0.89
VARS2-203ENST00000428017 EPM2AB3EWF7 344 aa9.51□□□□□ -0.89
VARS2-203ENST00000428017 TIMM17BO60830 172 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 95.9 ms