RNA–Protein interactions for RNA: ENST00000426681.2

PDGFA-205, Transcript of platelet derived growth factor subunit A, humanhuman

TSL 5

Gene PDGFA, Length 357 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFA-205ENST00000426681 TLX1NBP0CAT3 122 aa14.85□□□□□ -0.03
PDGFA-205ENST00000426681 C6orf226Q5I0X4 101 aa14.85□□□□□ -0.03
PDGFA-205ENST00000426681 IFI27L1Q96BM0 104 aa14.85□□□□□ -0.03
PDGFA-205ENST00000426681 TOMM7Q9P0U1 55 aa14.85□□□□□ -0.03
PDGFA-205ENST00000426681 VPS13BQ7Z7G8 4022 aa14.85□□□□□ -0.03
PDGFA-205ENST00000426681 SRRM2Q9UQ35 2752 aaKnown RBP14.84□□□□□ -0.03
PDGFA-205ENST00000426681 H3BRM9 83 aa14.84□□□□□ -0.03
PDGFA-205ENST00000426681 GAGE2BQ13066 116 aa14.84□□□□□ -0.03
PDGFA-205ENST00000426681 STPG4Q8N801 248 aa14.84□□□□□ -0.03
PDGFA-205ENST00000426681 CKS1BP61024 79 aa14.83□□□□□ -0.04
PDGFA-205ENST00000426681 TRAV12-1A0A0B4J245 112 aa14.82□□□□□ -0.04
PDGFA-205ENST00000426681 RPL18AQ02543 176 aaKnown RBP14.81□□□□□ -0.04
PDGFA-205ENST00000426681 NUPR1O60356 82 aa14.8□□□□□ -0.04
PDGFA-205ENST00000426681 SPINK8P0C7L1 97 aa14.8□□□□□ -0.04
PDGFA-205ENST00000426681 ZNF22P17026 224 aaPredicted RBP14.8□□□□□ -0.04
PDGFA-205ENST00000426681 S100A1P23297 94 aa14.8□□□□□ -0.04
PDGFA-205ENST00000426681 KRTAP10-4P60372 401 aaPredicted RBP14.8□□□□□ -0.04
PDGFA-205ENST00000426681 CHTOPQ9Y3Y2 248 aaKnown RBP14.8□□□□□ -0.04
PDGFA-205ENST00000426681 C11orf86A6NJI1 115 aa14.79□□□□□ -0.04
PDGFA-205ENST00000426681 HIST1H2BKO60814 126 aa14.79□□□□□ -0.04
PDGFA-205ENST00000426681 HIST1H2BJP06899 126 aa14.79□□□□□ -0.04
PDGFA-205ENST00000426681 INAFM2P0DMQ5 153 aa14.79□□□□□ -0.04
PDGFA-205ENST00000426681 HIST1H2BOP23527 126 aa14.79□□□□□ -0.04
PDGFA-205ENST00000426681 HIST1H2BBP33778 126 aa14.79□□□□□ -0.04
PDGFA-205ENST00000426681 CXCL5P42830 114 aa14.79□□□□□ -0.04
PDGFA-205ENST00000426681 HIST1H2BDP58876 126 aa14.79□□□□□ -0.04
PDGFA-205ENST00000426681 HIST1H2BCP62807 126 aa14.79□□□□□ -0.04
PDGFA-205ENST00000426681 HIST2H2BEQ16778 126 aa14.79□□□□□ -0.04
PDGFA-205ENST00000426681 HIST2H2BFQ5QNW6 126 aaPredicted RBP14.79□□□□□ -0.04
PDGFA-205ENST00000426681 COX7B2Q8TF08 81 aa14.79□□□□□ -0.04
PDGFA-205ENST00000426681 HIST1H2BHQ93079 126 aa14.79□□□□□ -0.04
PDGFA-205ENST00000426681 HIST1H2BNQ99877 126 aa14.79□□□□□ -0.04
PDGFA-205ENST00000426681 HIST1H2BMQ99879 126 aa14.79□□□□□ -0.04
PDGFA-205ENST00000426681 F8VRH5 84 aa14.78□□□□□ -0.04
PDGFA-205ENST00000426681 Q6ZRP5 223 aa14.78□□□□□ -0.04
PDGFA-205ENST00000426681 IGLV5-39A0A0G2JS06 123 aa14.77□□□□□ -0.05
PDGFA-205ENST00000426681 LEPROTL1O95214 131 aa14.77□□□□□ -0.05
PDGFA-205ENST00000426681 NDUFC2-KCTD14E9PQ53 114 aa14.76□□□□□ -0.05
PDGFA-205ENST00000426681 RPL37AP61513 92 aaKnown RBP14.76□□□□□ -0.05
PDGFA-205ENST00000426681 C9orf116Q5BN46 136 aaPredicted RBP14.75□□□□□ -0.05
PDGFA-205ENST00000426681 A0A1W2PNN7 141 aa14.74□□□□□ -0.05
PDGFA-205ENST00000426681 HSPB8Q9UJY1 196 aa14.74□□□□□ -0.05
PDGFA-205ENST00000426681 TMEM170BQ5T4T1 132 aa14.73□□□□□ -0.05
PDGFA-205ENST00000426681 C7orf33Q8WU49 177 aa14.73□□□□□ -0.05
PDGFA-205ENST00000426681 ATP6V1G1O75348 118 aa14.72□□□□□ -0.05
PDGFA-205ENST00000426681 GAGE2EQ4V326 116 aa14.71□□□□□ -0.05
PDGFA-205ENST00000426681 GAGE2DQ9UEU5 116 aa14.71□□□□□ -0.05
PDGFA-205ENST00000426681 ODF1Q14990 250 aa14.7□□□□□ -0.06
PDGFA-205ENST00000426681 FABP4P15090 132 aa14.69□□□□□ -0.06
PDGFA-205ENST00000426681 FLG2Q5D862 2391 aaPredicted RBP14.67□□□□□ -0.06
PDGFA-205ENST00000426681 TMEM223A0PJW6 202 aa14.67□□□□□ -0.06
PDGFA-205ENST00000426681 H0Y8G0 127 aa14.66□□□□□ -0.06
PDGFA-205ENST00000426681 COA6Q5JTJ3 125 aaKnown RBP14.66□□□□□ -0.06
PDGFA-205ENST00000426681 C9orf129Q5T035 196 aaKnown RBP14.66□□□□□ -0.06
PDGFA-205ENST00000426681 FAM168BA1KXE4 195 aa14.65□□□□□ -0.06
PDGFA-205ENST00000426681 SFTA2Q6UW10 78 aa14.63□□□□□ -0.07
PDGFA-205ENST00000426681 MAP1LC3CQ9BXW4 147 aa14.63□□□□□ -0.07
PDGFA-205ENST00000426681 PLNP26678 52 aa14.62□□□□□ -0.07
PDGFA-205ENST00000426681 KRTAP7-1Q8IUC3 87 aa14.62□□□□□ -0.07
PDGFA-205ENST00000426681 PRR3P79522 188 aaKnown RBP14.61□□□□□ -0.07
PDGFA-205ENST00000426681 FAM19A5Q7Z5A7 132 aaPredicted RBP14.6□□□□□ -0.07
PDGFA-205ENST00000426681 ZNF625Q96I27 306 aaPredicted RBP14.6□□□□□ -0.07
PDGFA-205ENST00000426681 XAGE1AQ9HD64 81 aa14.6□□□□□ -0.07
PDGFA-205ENST00000426681 HNRNPA3P51991 378 aaKnown RBP14.59□□□□□ -0.07
PDGFA-205ENST00000426681 PHF5AQ7RTV0 110 aaKnown RBP14.59□□□□□ -0.07
PDGFA-205ENST00000426681 DPM2O94777 84 aa14.58□□□□□ -0.08
PDGFA-205ENST00000426681 COX17Q14061 63 aa14.57□□□□□ -0.08
PDGFA-205ENST00000426681 SYS1-DBNDD2H3BUS1 97 aa14.56□□□□□ -0.08
PDGFA-205ENST00000426681 PMCHL2Q9BQD1 86 aa14.56□□□□□ -0.08
PDGFA-205ENST00000426681 ERG28Q9UKR5 140 aa14.56□□□□□ -0.08
PDGFA-205ENST00000426681 IGKCP01834 107 aa14.55□□□□□ -0.08
PDGFA-205ENST00000426681 M0QXV9 152 aa14.54□□□□□ -0.08
PDGFA-205ENST00000426681 SERTAD4-AS1Q5TG53 156 aa14.54□□□□□ -0.08
PDGFA-205ENST00000426681 MYCBP2O75592 4640 aa14.53□□□□□ -0.08
PDGFA-205ENST00000426681 PFN2P35080 140 aa14.53□□□□□ -0.08
PDGFA-205ENST00000426681 PSORS1C2Q9UIG4 136 aa14.52□□□□□ -0.09
PDGFA-205ENST00000426681 PLA2G2DQ9UNK4 145 aa14.52□□□□□ -0.09
PDGFA-205ENST00000426681 PKHD1L1Q86WI1 4243 aa14.52□□□□□ -0.09
PDGFA-205ENST00000426681 PET117Q6UWS5 81 aa14.51□□□□□ -0.09
PDGFA-205ENST00000426681 LEPROTO15243 131 aa14.5□□□□□ -0.09
PDGFA-205ENST00000426681 LINC01545Q5VT33 79 aa14.5□□□□□ -0.09
PDGFA-205ENST00000426681 TP73-AS1Q9UF72 201 aa14.5□□□□□ -0.09
PDGFA-205ENST00000426681 C22orf24Q9Y442 160 aa14.5□□□□□ -0.09
PDGFA-205ENST00000426681 HERVK_113P61574 105 aa14.49□□□□□ -0.09
PDGFA-205ENST00000426681 KRTAP11-1Q8IUC1 163 aa14.49□□□□□ -0.09
PDGFA-205ENST00000426681 PLEKHB2Q96CS7 222 aa14.49□□□□□ -0.09
PDGFA-205ENST00000426681 KRTAP29-1A8MX34 341 aaPredicted RBP14.48□□□□□ -0.09
PDGFA-205ENST00000426681 HERV-K104P63124 156 aa14.48□□□□□ -0.09
PDGFA-205ENST00000426681 SND1-IT1Q9HBX3 110 aa14.48□□□□□ -0.09
PDGFA-205ENST00000426681 NDUFA12Q9UI09 145 aa14.48□□□□□ -0.09
PDGFA-205ENST00000426681 C3orf79P0CE67 100 aa14.47□□□□□ -0.09
PDGFA-205ENST00000426681 LBHQ53QV2 105 aaPredicted RBP14.47□□□□□ -0.09
PDGFA-205ENST00000426681 IGLV5-37A0A075B6J1 123 aa14.46□□□□□ -0.09
PDGFA-205ENST00000426681 MYMXA0A1B0GTQ4 84 aa14.46□□□□□ -0.09
PDGFA-205ENST00000426681 TSPEAR-AS2P59090 65 aa14.46□□□□□ -0.09
PDGFA-205ENST00000426681 SRSF9Q13242 221 aaKnown RBP eCLIP14.46□□□□□ -0.09
PDGFA-205ENST00000426681 DMBT1Q9UGM3 2413 aaPredicted RBP14.46□□□□□ -0.09
PDGFA-205ENST00000426681 J3QQQ9 107 aa14.45□□□□□ -0.1
PDGFA-205ENST00000426681 OXTP01178 125 aa14.45□□□□□ -0.1
PDGFA-205ENST00000426681 UBE2BP63146 152 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 109.4 ms