RNA–Protein interactions for RNA: ENST00000425718.1

APOE-202, Transcript of apolipoprotein E, humanhuman

TSL 1 (best)

Gene APOE, Length 923 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-202ENST00000425718 SLPIP03973 132 aa15.62■□□□□ 0.09
APOE-202ENST00000425718 PMCHL2Q9BQD1 86 aa15.61■□□□□ 0.09
APOE-202ENST00000425718 PKHD1P08F94 4074 aa15.61■□□□□ 0.09
APOE-202ENST00000425718 Q6ZRU5 148 aa15.6■□□□□ 0.09
APOE-202ENST00000425718 TMA7Q9Y2S6 64 aaKnown RBP15.59■□□□□ 0.09
APOE-202ENST00000425718 PLEKHB2Q96CS7 222 aa15.58■□□□□ 0.08
APOE-202ENST00000425718 FUSP35637 526 aaKnown RBP eCLIP15.57■□□□□ 0.08
APOE-202ENST00000425718 DNAH5Q8TE73 4624 aa15.56■□□□□ 0.08
APOE-202ENST00000425718 LOC107984640A0A0U1RRK4 108 aa15.56■□□□□ 0.08
APOE-202ENST00000425718 UNQ6190/PRO20217Q6UXQ8 127 aa15.56■□□□□ 0.08
APOE-202ENST00000425718 LEPROTO15243 131 aa15.55■□□□□ 0.08
APOE-202ENST00000425718 LINC00474Q9P2X8 69 aa15.55■□□□□ 0.08
APOE-202ENST00000425718 C2orf82Q6UX34 121 aa15.54■□□□□ 0.08
APOE-202ENST00000425718 TLX1NBP0CAT3 122 aa15.53■□□□□ 0.08
APOE-202ENST00000425718 SDIM1Q6ZPB5 146 aa15.53■□□□□ 0.08
APOE-202ENST00000425718 KRTAP10-1P60331 282 aa15.52■□□□□ 0.08
APOE-202ENST00000425718 C6orf48Q9UBA6 75 aa15.52■□□□□ 0.08
APOE-202ENST00000425718 E9PLD3 99 aa15.51■□□□□ 0.07
APOE-202ENST00000425718 NMUP48645 174 aa15.51■□□□□ 0.07
APOE-202ENST00000425718 C10orf25Q5T742 122 aa15.51■□□□□ 0.07
APOE-202ENST00000425718 HERV-K104P63124 156 aa15.5■□□□□ 0.07
APOE-202ENST00000425718 MYMXA0A1B0GTQ4 84 aa15.49■□□□□ 0.07
APOE-202ENST00000425718 LINC00587B1AMM8 73 aa15.49■□□□□ 0.07
APOE-202ENST00000425718 LGALS3P17931 250 aaKnown RBP15.49■□□□□ 0.07
APOE-202ENST00000425718 LINC01620Q4KN68 170 aa15.49■□□□□ 0.07
APOE-202ENST00000425718 HSBP1L1C9JCN9 74 aa15.48■□□□□ 0.07
APOE-202ENST00000425718 J3QQQ9 107 aa15.48■□□□□ 0.07
APOE-202ENST00000425718 SCGB1D1O95968 90 aa15.48■□□□□ 0.07
APOE-202ENST00000425718 DYNC1H1Q14204 4646 aaKnown RBP15.47■□□□□ 0.07
APOE-202ENST00000425718 NDUFC2-KCTD14E9PQ53 114 aa15.47■□□□□ 0.07
APOE-202ENST00000425718 COX17Q14061 63 aa15.47■□□□□ 0.07
APOE-202ENST00000425718 Q6ZSA8 131 aa15.47■□□□□ 0.07
APOE-202ENST00000425718 NDUFA12Q9UI09 145 aa15.47■□□□□ 0.07
APOE-202ENST00000425718 RPL18AQ02543 176 aaKnown RBP15.46■□□□□ 0.07
APOE-202ENST00000425718 ZNF625Q96I27 306 aaPredicted RBP15.46■□□□□ 0.07
APOE-202ENST00000425718 CDK2AP2O75956 126 aa15.44■□□□□ 0.06
APOE-202ENST00000425718 PTTG1IPP53801 180 aa15.44■□□□□ 0.06
APOE-202ENST00000425718 LRP1BQ9NZR2 4599 aa15.43■□□□□ 0.06
APOE-202ENST00000425718 EPPK1P58107 5090 aaKnown RBP15.43■□□□□ 0.06
APOE-202ENST00000425718 GAGE2BQ13066 116 aa15.43■□□□□ 0.06
APOE-202ENST00000425718 CIRBPQ14011 172 aaKnown RBP15.43■□□□□ 0.06
APOE-202ENST00000425718 STPG4Q8N801 248 aa15.43■□□□□ 0.06
APOE-202ENST00000425718 DPH3Q96FX2 82 aa15.42■□□□□ 0.06
APOE-202ENST00000425718 A0A096LNI7 61 aa15.41■□□□□ 0.06
APOE-202ENST00000425718 ATOH7Q8N100 152 aa15.41■□□□□ 0.06
APOE-202ENST00000425718 ERG28Q9UKR5 140 aa15.41■□□□□ 0.06
APOE-202ENST00000425718 IGKV2-24A0A0C4DH68 120 aa15.4■□□□□ 0.06
APOE-202ENST00000425718 C9orf116Q5BN46 136 aaPredicted RBP15.4■□□□□ 0.06
APOE-202ENST00000425718 SPACA4Q8TDM5 124 aa15.4■□□□□ 0.06
APOE-202ENST00000425718 JOSD1Q15040 202 aaPredicted RBP15.39■□□□□ 0.05
APOE-202ENST00000425718 MAJINQ3KP22 176 aa15.39■□□□□ 0.05
APOE-202ENST00000425718 TSPEAR-AS2P59090 65 aa15.38■□□□□ 0.05
APOE-202ENST00000425718 MEIG1Q5JSS6 88 aa15.38■□□□□ 0.05
APOE-202ENST00000425718 Q6ZRP5 223 aa15.38■□□□□ 0.05
APOE-202ENST00000425718 FAM30AQ9NZY2 134 aa15.37■□□□□ 0.05
APOE-202ENST00000425718 GAGE2EQ4V326 116 aa15.36■□□□□ 0.05
APOE-202ENST00000425718 GAGE2DQ9UEU5 116 aa15.36■□□□□ 0.05
APOE-202ENST00000425718 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP15.36■□□□□ 0.05
APOE-202ENST00000425718 DNAH8Q96JB1 4490 aa15.36■□□□□ 0.05
APOE-202ENST00000425718 PFN2P35080 140 aa15.35■□□□□ 0.05
APOE-202ENST00000425718 CHTF8P0CG12 524 aa15.34■□□□□ 0.05
APOE-202ENST00000425718 ZNF815PA8K554 130 aa15.33■□□□□ 0.04
APOE-202ENST00000425718 LINC00158P58513 81 aa15.33■□□□□ 0.04
APOE-202ENST00000425718 ANKRD39Q53RE8 183 aa15.33■□□□□ 0.04
APOE-202ENST00000425718 SCXQ7RTU7 201 aa15.32■□□□□ 0.04
APOE-202ENST00000425718 PLAC8Q9NZF1 115 aa15.32■□□□□ 0.04
APOE-202ENST00000425718 A0A087WYN8 130 aa15.31■□□□□ 0.04
APOE-202ENST00000425718 IGKV2D-26A0A0A0MRZ7 120 aa15.31■□□□□ 0.04
APOE-202ENST00000425718 CIRBP-AS1Q8TBR5 109 aa15.3■□□□□ 0.04
APOE-202ENST00000425718 XGP55808 180 aa15.29■□□□□ 0.04
APOE-202ENST00000425718 PANO1I0J062 215 aa15.28■□□□□ 0.04
APOE-202ENST00000425718 SMIM13P0DJ93 91 aa15.28■□□□□ 0.04
APOE-202ENST00000425718 VAMP8Q9BV40 100 aa15.28■□□□□ 0.04
APOE-202ENST00000425718 A0A0J9YXY3 114 aa15.27■□□□□ 0.04
APOE-202ENST00000425718 TIMM17BO60830 172 aa15.27■□□□□ 0.04
APOE-202ENST00000425718 BIRC6Q9NR09 4857 aa15.27■□□□□ 0.03
APOE-202ENST00000425718 PLA2G2DQ9UNK4 145 aa15.26■□□□□ 0.03
APOE-202ENST00000425718 C9orf129Q5T035 196 aaKnown RBP15.25■□□□□ 0.03
APOE-202ENST00000425718 SCGB1D4Q6XE38 83 aa15.25■□□□□ 0.03
APOE-202ENST00000425718 SND1-IT1Q9HBX3 110 aa15.25■□□□□ 0.03
APOE-202ENST00000425718 XAGE1AQ9HD64 81 aa15.25■□□□□ 0.03
APOE-202ENST00000425718 EPM2AB3EWF7 344 aa15.24■□□□□ 0.03
APOE-202ENST00000425718 APOBP04114 4563 aaKnown RBP15.24■□□□□ 0.03
APOE-202ENST00000425718 A0A0U1RRA0 63 aa15.23■□□□□ 0.03
APOE-202ENST00000425718 RPL24P83731 157 aaKnown RBP15.23■□□□□ 0.03
APOE-202ENST00000425718 PYY3Q5JQD4 70 aa15.23■□□□□ 0.03
APOE-202ENST00000425718 MIR7-3HGQ8N6C7 128 aa15.23■□□□□ 0.03
APOE-202ENST00000425718 TMEM238C9JI98 176 aa15.22■□□□□ 0.03
APOE-202ENST00000425718 C7orf33Q8WU49 177 aa15.22■□□□□ 0.03
APOE-202ENST00000425718 MIEN1Q9BRT3 115 aa15.22■□□□□ 0.03
APOE-202ENST00000425718 COPS9Q8WXC6 57 aa15.21■□□□□ 0.03
APOE-202ENST00000425718 A0A1W2PNN7 141 aa15.2■□□□□ 0.02
APOE-202ENST00000425718 SPATA45Q537H7 98 aa15.2■□□□□ 0.02
APOE-202ENST00000425718 PCP2Q8IVA1 136 aa15.2■□□□□ 0.02
APOE-202ENST00000425718 TP73-AS1Q9UF72 201 aa15.2■□□□□ 0.02
APOE-202ENST00000425718 PAM16Q9Y3D7 125 aa15.2■□□□□ 0.02
APOE-202ENST00000425718 FAM19A5Q7Z5A7 132 aaPredicted RBP15.19■□□□□ 0.02
APOE-202ENST00000425718 TTTY13Q9BZ97 58 aa15.19■□□□□ 0.02
APOE-202ENST00000425718 LOC107984156A0A0G2JMH3 177 aa15.18■□□□□ 0.02
APOE-202ENST00000425718 COX8AP10176 69 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms