RNA–Protein interactions for RNA: ENST00000424059.1

PMS1-209, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 2,004 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-209ENST00000424059 ODF3BA8MYP8 253 aa1.78□□□□□ -2.12
PMS1-209ENST00000424059 PANO1I0J062 215 aa1.78□□□□□ -2.12
PMS1-209ENST00000424059 Q86TA4 180 aa1.78□□□□□ -2.12
PMS1-209ENST00000424059 Q8N377 158 aa1.78□□□□□ -2.12
PMS1-209ENST00000424059 SPANXA2-OT1Q8N9U9 137 aa1.78□□□□□ -2.12
PMS1-209ENST00000424059 LINC00208Q96KT6 92 aa1.78□□□□□ -2.12
PMS1-209ENST00000424059 MRPL36Q9P0J6 103 aaKnown RBP1.78□□□□□ -2.12
PMS1-209ENST00000424059 SSC5DA1L4H1 1573 aa1.78□□□□□ -2.12
PMS1-209ENST00000424059 GOLGA4Q13439 2230 aaKnown RBP1.78□□□□□ -2.12
PMS1-209ENST00000424059 TRBV10-1A0A0K0K1A3 114 aa1.78□□□□□ -2.13
PMS1-209ENST00000424059 H3BPC8 53 aa1.78□□□□□ -2.13
PMS1-209ENST00000424059 NDUFB1O75438 58 aa1.78□□□□□ -2.13
PMS1-209ENST00000424059 PDE6GP18545 87 aa1.78□□□□□ -2.13
PMS1-209ENST00000424059 C1orf137Q5JT78 98 aa1.78□□□□□ -2.13
PMS1-209ENST00000424059 ZGRF1Q86YA3 2104 aa1.78□□□□□ -2.13
PMS1-209ENST00000424059 MIR7-3HGQ8N6C7 128 aa1.78□□□□□ -2.13
PMS1-209ENST00000424059 COX7B2Q8TF08 81 aa1.78□□□□□ -2.13
PMS1-209ENST00000424059 PRRC2AP48634 2157 aaKnown RBP1.78□□□□□ -2.13
PMS1-209ENST00000424059 ARFGEF3Q5TH69 2177 aa1.78□□□□□ -2.13
PMS1-209ENST00000424059 ADAMTS9Q9P2N4 1935 aa1.77□□□□□ -2.13
PMS1-209ENST00000424059 IGLV2-33A0A075B6J2 118 aaPredicted RBP1.77□□□□□ -2.13
PMS1-209ENST00000424059 NDPQ00604 133 aa1.77□□□□□ -2.13
PMS1-209ENST00000424059 Q8NBF4 154 aa1.77□□□□□ -2.13
PMS1-209ENST00000424059 DEFB126Q9BYW3 111 aa1.77□□□□□ -2.13
PMS1-209ENST00000424059 CEP192Q8TEP8 1941 aa1.77□□□□□ -2.13
PMS1-209ENST00000424059 AHNAKQ09666 5890 aaKnown RBP1.77□□□□□ -2.13
PMS1-209ENST00000424059 MALRD1Q5VYJ5 2156 aa1.76□□□□□ -2.13
PMS1-209ENST00000424059 A0A1W2PPR1 153 aa1.76□□□□□ -2.13
PMS1-209ENST00000424059 H0YGX0 51 aa1.76□□□□□ -2.13
PMS1-209ENST00000424059 CCL22O00626 93 aa1.76□□□□□ -2.13
PMS1-209ENST00000424059 NCR3O14931 201 aa1.76□□□□□ -2.13
PMS1-209ENST00000424059 CNFNQ9BYD5 112 aa1.76□□□□□ -2.13
PMS1-209ENST00000424059 DNAJC13O75165 2243 aa1.76□□□□□ -2.13
PMS1-209ENST00000424059 SDK2Q58EX2 2172 aa1.76□□□□□ -2.13
PMS1-209ENST00000424059 IGKV3-7A0A075B6H7 116 aa1.76□□□□□ -2.13
PMS1-209ENST00000424059 LOC110117498A0A087WWA1 95 aa1.76□□□□□ -2.13
PMS1-209ENST00000424059 LINC00959A0A1B0GUT2 108 aa1.76□□□□□ -2.13
PMS1-209ENST00000424059 IGHV3-53P01767 116 aa1.76□□□□□ -2.13
PMS1-209ENST00000424059 SPATA8Q6RVD6 105 aa1.76□□□□□ -2.13
PMS1-209ENST00000424059 SPRR4Q96PI1 79 aa1.76□□□□□ -2.13
PMS1-209ENST00000424059 KLK9Q9UKQ9 250 aa1.76□□□□□ -2.13
PMS1-209ENST00000424059 CR1P17927 2039 aa1.76□□□□□ -2.13
PMS1-209ENST00000424059 FREM1Q5H8C1 2179 aa1.75□□□□□ -2.13
PMS1-209ENST00000424059 IGLV11-55A0A075B6I3 123 aa1.75□□□□□ -2.13
PMS1-209ENST00000424059 NUPR2A6NF83 97 aa1.75□□□□□ -2.13
PMS1-209ENST00000424059 ZNF861PO60384 105 aa1.75□□□□□ -2.13
PMS1-209ENST00000424059 INSP01308 110 aa1.75□□□□□ -2.13
PMS1-209ENST00000424059 IGKV3-15P01624 115 aa1.75□□□□□ -2.13
PMS1-209ENST00000424059 C9orf163Q8N9P6 203 aa1.75□□□□□ -2.13
PMS1-209ENST00000424059 WFDC10AQ9H1F0 79 aa1.75□□□□□ -2.13
PMS1-209ENST00000424059 CRCT1Q9UGL9 99 aa1.75□□□□□ -2.13
PMS1-209ENST00000424059 MINOS1-NBL1R4GNA1 71 aa1.75□□□□□ -2.13
PMS1-209ENST00000424059 DIDO1Q9BTC0 2240 aaKnown RBP1.75□□□□□ -2.13
PMS1-209ENST00000424059 DOCK10Q96BY6 2186 aa1.75□□□□□ -2.13
PMS1-209ENST00000424059 IGHV3-64DA0A0J9YX35 117 aa1.74□□□□□ -2.13
PMS1-209ENST00000424059 H0Y9P7 68 aa1.74□□□□□ -2.13
PMS1-209ENST00000424059 CRIP1P50238 77 aa1.74□□□□□ -2.13
PMS1-209ENST00000424059 CCL18P55774 89 aa1.74□□□□□ -2.13
PMS1-209ENST00000424059 HAMPP81172 84 aa1.74□□□□□ -2.13
PMS1-209ENST00000424059 DMAC1Q96GE9 116 aa1.74□□□□□ -2.13
PMS1-209ENST00000424059 SMIM2Q9BVW6 85 aa1.74□□□□□ -2.13
PMS1-209ENST00000424059 TNRC6CQ9HCJ0 1690 aaKnown RBP1.74□□□□□ -2.13
PMS1-209ENST00000424059 MED12Q93074 2177 aa1.74□□□□□ -2.13
PMS1-209ENST00000424059 IGKV2-29A2NJV5 120 aaPredicted RBP1.74□□□□□ -2.13
PMS1-209ENST00000424059 IGKV4-1P06312 121 aa1.74□□□□□ -2.13
PMS1-209ENST00000424059 FREM3P0C091 2139 aa1.74□□□□□ -2.13
PMS1-209ENST00000424059 RPS27P42677 84 aaKnown RBP1.74□□□□□ -2.13
PMS1-209ENST00000424059 DEFB114Q30KQ6 69 aa1.74□□□□□ -2.13
PMS1-209ENST00000424059 C10orf113Q5VZT2 155 aa1.74□□□□□ -2.13
PMS1-209ENST00000424059 Q5W150 140 aa1.74□□□□□ -2.13
PMS1-209ENST00000424059 Q6ZTI0 123 aa1.74□□□□□ -2.13
PMS1-209ENST00000424059 IGLV4-60A0A075B6I1 120 aa1.73□□□□□ -2.13
PMS1-209ENST00000424059 H3BQ85 93 aa1.73□□□□□ -2.13
PMS1-209ENST00000424059 NDUFA4O00483 81 aa1.73□□□□□ -2.13
PMS1-209ENST00000424059 LYZP61626 148 aa1.73□□□□□ -2.13
PMS1-209ENST00000424059 ERHP84090 104 aaKnown RBP1.73□□□□□ -2.13
PMS1-209ENST00000424059 PDE6HQ13956 83 aa1.73□□□□□ -2.13
PMS1-209ENST00000424059 GAFA1Q96PS6 74 aa1.73□□□□□ -2.13
PMS1-209ENST00000424059 IGKV3OR2-268A0A0C4DH90 116 aa1.73□□□□□ -2.13
PMS1-209ENST00000424059 IGLV3-1P01715 115 aa1.73□□□□□ -2.13
PMS1-209ENST00000424059 CCL3L1P16619 93 aa1.73□□□□□ -2.13
PMS1-209ENST00000424059 COA5Q86WW8 74 aa1.73□□□□□ -2.13
PMS1-209ENST00000424059 DEFB106AQ8N104 65 aa1.73□□□□□ -2.13
PMS1-209ENST00000424059 LINC00308Q8TCZ7 52 aa1.73□□□□□ -2.13
PMS1-209ENST00000424059 KLK12Q9UKR0 248 aa1.73□□□□□ -2.13
PMS1-209ENST00000424059 KIAA0100Q14667 2235 aaKnown RBP1.72□□□□□ -2.13
PMS1-209ENST00000424059 IGHV3-64A0A075B6Q5 118 aa1.72□□□□□ -2.13
PMS1-209ENST00000424059 ETDCA0A1B0GVM5 59 aa1.72□□□□□ -2.13
PMS1-209ENST00000424059 GIG44P09565 113 aaPredicted RBP1.72□□□□□ -2.13
PMS1-209ENST00000424059 RNASE3P12724 160 aaKnown RBP1.72□□□□□ -2.13
PMS1-209ENST00000424059 ZNRD1Q9P1U0 126 aa1.72□□□□□ -2.13
PMS1-209ENST00000424059 TRGV4A0A0C4DH28 118 aa1.71□□□□□ -2.14
PMS1-209ENST00000424059 UQCR11O14957 56 aa1.71□□□□□ -2.14
PMS1-209ENST00000424059 KCNQ1DNQ9H478 68 aa1.71□□□□□ -2.14
PMS1-209ENST00000424059 TRGV2A0A075B6R0 118 aa1.71□□□□□ -2.14
PMS1-209ENST00000424059 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.71□□□□□ -2.14
PMS1-209ENST00000424059 DEFB112Q30KQ8 113 aa1.71□□□□□ -2.14
PMS1-209ENST00000424059 LCE1CQ5T751 118 aa1.71□□□□□ -2.14
PMS1-209ENST00000424059 LCE1BQ5T7P3 118 aa1.71□□□□□ -2.14
PMS1-209ENST00000424059 A0A087WTM6 91 aa1.7□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms