RNA–Protein interactions for RNA: ENST00000423998.1

GTF3C2-204, Transcript of general transcription factor IIIC subunit 2, humanhuman

TSL 5

Gene GTF3C2, Length 828 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-204ENST00000423998 SPACA4Q8TDM5 124 aa8.84□□□□□ -0.99
GTF3C2-204ENST00000423998 C7orf33Q8WU49 177 aa8.84□□□□□ -0.99
GTF3C2-204ENST00000423998 IGKV2-24A0A0C4DH68 120 aa8.83□□□□□ -1
GTF3C2-204ENST00000423998 LINC00587B1AMM8 73 aa8.83□□□□□ -1
GTF3C2-204ENST00000423998 NDUFC2-KCTD14E9PQ53 114 aa8.83□□□□□ -1
GTF3C2-204ENST00000423998 PTTG1IPP53801 180 aa8.83□□□□□ -1
GTF3C2-204ENST00000423998 RPL18AQ02543 176 aaKnown RBP8.83□□□□□ -1
GTF3C2-204ENST00000423998 GAGE2BQ13066 116 aa8.83□□□□□ -1
GTF3C2-204ENST00000423998 COA6Q5JTJ3 125 aaKnown RBP8.83□□□□□ -1
GTF3C2-204ENST00000423998 UNQ6190/PRO20217Q6UXQ8 127 aa8.83□□□□□ -1
GTF3C2-204ENST00000423998 SPINK8P0C7L1 97 aa8.82□□□□□ -1
GTF3C2-204ENST00000423998 ZNF22P17026 224 aaPredicted RBP8.82□□□□□ -1
GTF3C2-204ENST00000423998 HERVK_113P61574 105 aa8.82□□□□□ -1
GTF3C2-204ENST00000423998 A0A087WYN8 130 aa8.81□□□□□ -1
GTF3C2-204ENST00000423998 C11orf86A6NJI1 115 aa8.81□□□□□ -1
GTF3C2-204ENST00000423998 H0Y8G0 127 aa8.81□□□□□ -1
GTF3C2-204ENST00000423998 DPM2O94777 84 aa8.81□□□□□ -1
GTF3C2-204ENST00000423998 S100A6P06703 90 aa8.81□□□□□ -1
GTF3C2-204ENST00000423998 STPG4Q8N801 248 aa8.81□□□□□ -1
GTF3C2-204ENST00000423998 PLAC8Q9NZF1 115 aa8.81□□□□□ -1
GTF3C2-204ENST00000423998 A0A096LNI7 61 aa8.8□□□□□ -1
GTF3C2-204ENST00000423998 IGLV5-39A0A0G2JS06 123 aa8.8□□□□□ -1
GTF3C2-204ENST00000423998 COX17Q14061 63 aa8.8□□□□□ -1
GTF3C2-204ENST00000423998 C6orf48Q9UBA6 75 aa8.8□□□□□ -1
GTF3C2-204ENST00000423998 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.8□□□□□ -1
GTF3C2-204ENST00000423998 DYNC1H1Q14204 4646 aaKnown RBP8.79□□□□□ -1
GTF3C2-204ENST00000423998 NUPR1O60356 82 aa8.79□□□□□ -1
GTF3C2-204ENST00000423998 SMR3BP02814 79 aaPredicted RBP8.79□□□□□ -1
GTF3C2-204ENST00000423998 LINC00310P59036 64 aa8.79□□□□□ -1
GTF3C2-204ENST00000423998 ODF1Q14990 250 aa8.79□□□□□ -1
GTF3C2-204ENST00000423998 PET117Q6UWS5 81 aa8.79□□□□□ -1
GTF3C2-204ENST00000423998 C2orf82Q6UX34 121 aa8.79□□□□□ -1
GTF3C2-204ENST00000423998 LRP1BQ9NZR2 4599 aa8.79□□□□□ -1
GTF3C2-204ENST00000423998 C20orf202A1L168 122 aa8.78□□□□□ -1
GTF3C2-204ENST00000423998 IGKCP01834 107 aa8.78□□□□□ -1
GTF3C2-204ENST00000423998 S100A2P29034 98 aa8.78□□□□□ -1
GTF3C2-204ENST00000423998 C10orf25Q5T742 122 aa8.78□□□□□ -1
GTF3C2-204ENST00000423998 LINC00528Q8N1L1 170 aa8.78□□□□□ -1
GTF3C2-204ENST00000423998 TMEM223A0PJW6 202 aa8.77□□□□□ -1.01
GTF3C2-204ENST00000423998 SYS1-DBNDD2H3BUS1 97 aa8.77□□□□□ -1.01
GTF3C2-204ENST00000423998 CHTF8P0CG12 524 aa8.77□□□□□ -1.01
GTF3C2-204ENST00000423998 HERV-K104P63124 156 aa8.77□□□□□ -1.01
GTF3C2-204ENST00000423998 Q5VSD8 79 aa8.77□□□□□ -1.01
GTF3C2-204ENST00000423998 GAGE2EQ4V326 116 aa8.76□□□□□ -1.01
GTF3C2-204ENST00000423998 PLEKHB2Q96CS7 222 aa8.76□□□□□ -1.01
GTF3C2-204ENST00000423998 GAGE2DQ9UEU5 116 aa8.76□□□□□ -1.01
GTF3C2-204ENST00000423998 DNAH5Q8TE73 4624 aa8.75□□□□□ -1.01
GTF3C2-204ENST00000423998 Q6ZRP5 223 aa8.75□□□□□ -1.01
GTF3C2-204ENST00000423998 MYMXA0A1B0GTQ4 84 aa8.74□□□□□ -1.01
GTF3C2-204ENST00000423998 NMUP48645 174 aa8.74□□□□□ -1.01
GTF3C2-204ENST00000423998 HAMPP81172 84 aa8.74□□□□□ -1.01
GTF3C2-204ENST00000423998 KIAA1109Q2LD37 5005 aa8.73□□□□□ -1.01
GTF3C2-204ENST00000423998 PANO1I0J062 215 aa8.73□□□□□ -1.01
GTF3C2-204ENST00000423998 RPL37AP61513 92 aaKnown RBP8.73□□□□□ -1.01
GTF3C2-204ENST00000423998 LBHQ53QV2 105 aaPredicted RBP8.73□□□□□ -1.01
GTF3C2-204ENST00000423998 C9orf116Q5BN46 136 aaPredicted RBP8.73□□□□□ -1.01
GTF3C2-204ENST00000423998 LEPROTO15243 131 aa8.72□□□□□ -1.01
GTF3C2-204ENST00000423998 ERG28Q9UKR5 140 aa8.72□□□□□ -1.01
GTF3C2-204ENST00000423998 LGALS3P17931 250 aaKnown RBP8.71□□□□□ -1.02
GTF3C2-204ENST00000423998 KRTDAPP60985 99 aa8.71□□□□□ -1.02
GTF3C2-204ENST00000423998 LINC01545Q5VT33 79 aa8.71□□□□□ -1.02
GTF3C2-204ENST00000423998 SNRPEP62304 92 aaKnown RBP8.7□□□□□ -1.02
GTF3C2-204ENST00000423998 RPL24P83731 157 aaKnown RBP8.7□□□□□ -1.02
GTF3C2-204ENST00000423998 NDUFA12Q9UI09 145 aa8.7□□□□□ -1.02
GTF3C2-204ENST00000423998 J3QQQ9 107 aa8.69□□□□□ -1.02
GTF3C2-204ENST00000423998 C3orf79P0CE67 100 aa8.69□□□□□ -1.02
GTF3C2-204ENST00000423998 INAFM2P0DMQ5 153 aa8.69□□□□□ -1.02
GTF3C2-204ENST00000423998 PFN2P35080 140 aa8.69□□□□□ -1.02
GTF3C2-204ENST00000423998 LINC00158P58513 81 aa8.69□□□□□ -1.02
GTF3C2-204ENST00000423998 MEIG1Q5JSS6 88 aa8.69□□□□□ -1.02
GTF3C2-204ENST00000423998 ZNF625Q96I27 306 aaPredicted RBP8.69□□□□□ -1.02
GTF3C2-204ENST00000423998 PLA2G2DQ9UNK4 145 aa8.69□□□□□ -1.02
GTF3C2-204ENST00000423998 A0A1W2PNN7 141 aa8.68□□□□□ -1.02
GTF3C2-204ENST00000423998 TP73-AS1Q9UF72 201 aa8.68□□□□□ -1.02
GTF3C2-204ENST00000423998 E9PLD3 99 aa8.67□□□□□ -1.02
GTF3C2-204ENST00000423998 NKAPP1Q8N9T2 125 aa8.67□□□□□ -1.02
GTF3C2-204ENST00000423998 PMCHL2Q9BQD1 86 aa8.67□□□□□ -1.02
GTF3C2-204ENST00000423998 APOBP04114 4563 aaKnown RBP8.66□□□□□ -1.02
GTF3C2-204ENST00000423998 M0QXV9 152 aa8.66□□□□□ -1.02
GTF3C2-204ENST00000423998 UBE2BP63146 152 aa8.66□□□□□ -1.02
GTF3C2-204ENST00000423998 FAM19A5Q7Z5A7 132 aaPredicted RBP8.66□□□□□ -1.02
GTF3C2-204ENST00000423998 XAGE1AQ9HD64 81 aa8.66□□□□□ -1.02
GTF3C2-204ENST00000423998 C9orf129Q5T035 196 aaKnown RBP8.65□□□□□ -1.02
GTF3C2-204ENST00000423998 HIST3H2BBQ8N257 126 aa8.65□□□□□ -1.02
GTF3C2-204ENST00000423998 HSPG2P98160 4391 aa8.65□□□□□ -1.03
GTF3C2-204ENST00000423998 RYR1P21817 5038 aa8.64□□□□□ -1.03
GTF3C2-204ENST00000423998 HSBP1L1C9JCN9 74 aa8.64□□□□□ -1.03
GTF3C2-204ENST00000423998 MIEN1Q9BRT3 115 aa8.64□□□□□ -1.03
GTF3C2-204ENST00000423998 S100A12P80511 92 aa8.63□□□□□ -1.03
GTF3C2-204ENST00000423998 MRPL55Q7Z7F7 128 aaKnown RBP8.63□□□□□ -1.03
GTF3C2-204ENST00000423998 HIST1H2BLQ99880 126 aa8.63□□□□□ -1.03
GTF3C2-204ENST00000423998 SND1-IT1Q9HBX3 110 aa8.63□□□□□ -1.03
GTF3C2-204ENST00000423998 C22orf24Q9Y442 160 aa8.63□□□□□ -1.03
GTF3C2-204ENST00000423998 COPS9Q8WXC6 57 aa8.62□□□□□ -1.03
GTF3C2-204ENST00000423998 HERC2O95714 4834 aa8.61□□□□□ -1.03
GTF3C2-204ENST00000423998 DNAH8Q96JB1 4490 aa8.61□□□□□ -1.03
GTF3C2-204ENST00000423998 IGLV5-37A0A075B6J1 123 aa8.61□□□□□ -1.03
GTF3C2-204ENST00000423998 FAM168BA1KXE4 195 aa8.61□□□□□ -1.03
GTF3C2-204ENST00000423998 PHF5AQ7RTV0 110 aaKnown RBP8.61□□□□□ -1.03
GTF3C2-204ENST00000423998 C5orf52A6NGY3 159 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 233.1 ms