RNA–Protein interactions for RNA: ENST00000423701.6

SEC22C-207, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 1 (best) BASIC

Gene SEC22C, Length 1,458 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-207ENST00000423701 KRTAP17-1Q9BYP8 105 aa13.84□□□□□ -0.19
SEC22C-207ENST00000423701 RNF151Q2KHN1 245 aa13.83□□□□□ -0.2
SEC22C-207ENST00000423701 CIRBP-AS1Q8TBR5 109 aa13.83□□□□□ -0.2
SEC22C-207ENST00000423701 C6orf48Q9UBA6 75 aa13.83□□□□□ -0.2
SEC22C-207ENST00000423701 PKIGQ9Y2B9 76 aa13.83□□□□□ -0.2
SEC22C-207ENST00000423701 A0A096LNI7 61 aa13.82□□□□□ -0.2
SEC22C-207ENST00000423701 C6orf226Q5I0X4 101 aa13.82□□□□□ -0.2
SEC22C-207ENST00000423701 SPACA4Q8TDM5 124 aa13.82□□□□□ -0.2
SEC22C-207ENST00000423701 IGKV2-24A0A0C4DH68 120 aa13.81□□□□□ -0.2
SEC22C-207ENST00000423701 ODF1Q14990 250 aa13.81□□□□□ -0.2
SEC22C-207ENST00000423701 LOC107984640A0A0U1RRK4 108 aa13.8□□□□□ -0.2
SEC22C-207ENST00000423701 CKS1BP61024 79 aa13.8□□□□□ -0.2
SEC22C-207ENST00000423701 TMEM170BQ5T4T1 132 aa13.8□□□□□ -0.2
SEC22C-207ENST00000423701 COX7B2Q8TF08 81 aa13.8□□□□□ -0.2
SEC22C-207ENST00000423701 IGLV5-39A0A0G2JS06 123 aa13.79□□□□□ -0.2
SEC22C-207ENST00000423701 TRBV30A0A0K0K1B3 111 aa13.79□□□□□ -0.2
SEC22C-207ENST00000423701 SMR3BP02814 79 aaPredicted RBP13.79□□□□□ -0.2
SEC22C-207ENST00000423701 CXCL5P42830 114 aa13.78□□□□□ -0.2
SEC22C-207ENST00000423701 Q8N1X5 172 aa13.78□□□□□ -0.2
SEC22C-207ENST00000423701 MAP1LC3CQ9BXW4 147 aa13.78□□□□□ -0.2
SEC22C-207ENST00000423701 PTTG1IPP53801 180 aa13.77□□□□□ -0.21
SEC22C-207ENST00000423701 RPL18AQ02543 176 aaKnown RBP13.77□□□□□ -0.21
SEC22C-207ENST00000423701 MAJINQ3KP22 176 aa13.77□□□□□ -0.21
SEC22C-207ENST00000423701 GAGE2BQ13066 116 aa13.76□□□□□ -0.21
SEC22C-207ENST00000423701 DPH3Q96FX2 82 aa13.76□□□□□ -0.21
SEC22C-207ENST00000423701 A0A087WYN8 130 aa13.75□□□□□ -0.21
SEC22C-207ENST00000423701 LINC00474Q9P2X8 69 aa13.75□□□□□ -0.21
SEC22C-207ENST00000423701 TLX1NBP0CAT3 122 aa13.74□□□□□ -0.21
SEC22C-207ENST00000423701 C9orf116Q5BN46 136 aaPredicted RBP13.74□□□□□ -0.21
SEC22C-207ENST00000423701 TMEM223A0PJW6 202 aa13.74□□□□□ -0.21
SEC22C-207ENST00000423701 PMCHL2Q9BQD1 86 aa13.74□□□□□ -0.21
SEC22C-207ENST00000423701 PLNP26678 52 aa13.73□□□□□ -0.21
SEC22C-207ENST00000423701 Q6ZRP5 223 aa13.73□□□□□ -0.21
SEC22C-207ENST00000423701 PLAC8Q9NZF1 115 aa13.73□□□□□ -0.21
SEC22C-207ENST00000423701 SYS1-DBNDD2H3BUS1 97 aa13.72□□□□□ -0.21
SEC22C-207ENST00000423701 STPG4Q8N801 248 aa13.72□□□□□ -0.21
SEC22C-207ENST00000423701 NDUFC2-KCTD14E9PQ53 114 aa13.71□□□□□ -0.21
SEC22C-207ENST00000423701 DPM2O94777 84 aa13.71□□□□□ -0.21
SEC22C-207ENST00000423701 KRTAP4-5Q9BYR2 181 aa13.71□□□□□ -0.21
SEC22C-207ENST00000423701 Q5VSD8 79 aa13.7□□□□□ -0.22
SEC22C-207ENST00000423701 LINC00528Q8N1L1 170 aa13.7□□□□□ -0.22
SEC22C-207ENST00000423701 FAT1Q14517 4588 aa13.69□□□□□ -0.22
SEC22C-207ENST00000423701 EPM2AB3EWF7 344 aa13.68□□□□□ -0.22
SEC22C-207ENST00000423701 IGKCP01834 107 aa13.68□□□□□ -0.22
SEC22C-207ENST00000423701 GAGE2EQ4V326 116 aa13.68□□□□□ -0.22
SEC22C-207ENST00000423701 GAGE2DQ9UEU5 116 aa13.68□□□□□ -0.22
SEC22C-207ENST00000423701 FAM229AH3BQW9 127 aa13.67□□□□□ -0.22
SEC22C-207ENST00000423701 C3orf79P0CE67 100 aa13.67□□□□□ -0.22
SEC22C-207ENST00000423701 LINC01545Q5VT33 79 aa13.66□□□□□ -0.22
SEC22C-207ENST00000423701 PET117Q6UWS5 81 aa13.66□□□□□ -0.22
SEC22C-207ENST00000423701 HIST3H2BBQ8N257 126 aa13.65□□□□□ -0.22
SEC22C-207ENST00000423701 A0A1W2PNN7 141 aa13.64□□□□□ -0.23
SEC22C-207ENST00000423701 S100A6P06703 90 aa13.64□□□□□ -0.23
SEC22C-207ENST00000423701 KRTDAPP60985 99 aa13.64□□□□□ -0.23
SEC22C-207ENST00000423701 ZNF625Q96I27 306 aaPredicted RBP13.64□□□□□ -0.23
SEC22C-207ENST00000423701 SFTA2Q6UW10 78 aa13.62□□□□□ -0.23
SEC22C-207ENST00000423701 C9orf129Q5T035 196 aaKnown RBP13.61□□□□□ -0.23
SEC22C-207ENST00000423701 FAM168BA1KXE4 195 aa13.61□□□□□ -0.23
SEC22C-207ENST00000423701 HERVK_113P61574 105 aa13.61□□□□□ -0.23
SEC22C-207ENST00000423701 S100A2P29034 98 aa13.6□□□□□ -0.23
SEC22C-207ENST00000423701 TSPEAR-AS2P59090 65 aa13.6□□□□□ -0.23
SEC22C-207ENST00000423701 HIST1H2BLQ99880 126 aa13.6□□□□□ -0.23
SEC22C-207ENST00000423701 XAGE1AQ9HD64 81 aa13.6□□□□□ -0.23
SEC22C-207ENST00000423701 LEPROTO15243 131 aa13.59□□□□□ -0.23
SEC22C-207ENST00000423701 PLA2G1BP04054 148 aaKnown RBP13.59□□□□□ -0.23
SEC22C-207ENST00000423701 ERG28Q9UKR5 140 aa13.59□□□□□ -0.23
SEC22C-207ENST00000423701 PFN2P35080 140 aa13.58□□□□□ -0.24
SEC22C-207ENST00000423701 SNRPEP62304 92 aaKnown RBP13.57□□□□□ -0.24
SEC22C-207ENST00000423701 FAM19A5Q7Z5A7 132 aaPredicted RBP13.57□□□□□ -0.24
SEC22C-207ENST00000423701 C7orf33Q8WU49 177 aa13.57□□□□□ -0.24
SEC22C-207ENST00000423701 PLEKHB2Q96CS7 222 aa13.57□□□□□ -0.24
SEC22C-207ENST00000423701 ABCA13Q86UQ4 5058 aa13.57□□□□□ -0.24
SEC22C-207ENST00000423701 KRTAP10-4P60372 401 aaPredicted RBP13.56□□□□□ -0.24
SEC22C-207ENST00000423701 RPL37AP61513 92 aaKnown RBP13.56□□□□□ -0.24
SEC22C-207ENST00000423701 KRTAP7-1Q8IUC3 87 aa13.56□□□□□ -0.24
SEC22C-207ENST00000423701 NDUFA12Q9UI09 145 aa13.56□□□□□ -0.24
SEC22C-207ENST00000423701 C20orf202A1L168 122 aa13.55□□□□□ -0.24
SEC22C-207ENST00000423701 J3QQQ9 107 aa13.55□□□□□ -0.24
SEC22C-207ENST00000423701 COX17Q14061 63 aa13.55□□□□□ -0.24
SEC22C-207ENST00000423701 C5orf52A6NGY3 159 aa13.54□□□□□ -0.24
SEC22C-207ENST00000423701 E9PLD3 99 aa13.54□□□□□ -0.24
SEC22C-207ENST00000423701 SRRM2Q9UQ35 2752 aaKnown RBP13.54□□□□□ -0.24
SEC22C-207ENST00000423701 HERV-K104P63124 156 aa13.53□□□□□ -0.24
SEC22C-207ENST00000423701 PHF5AQ7RTV0 110 aaKnown RBP13.53□□□□□ -0.24
SEC22C-207ENST00000423701 VPS13BQ7Z7G8 4022 aa13.53□□□□□ -0.24
SEC22C-207ENST00000423701 MYMXA0A1B0GTQ4 84 aa13.52□□□□□ -0.25
SEC22C-207ENST00000423701 LGALS3P17931 250 aaKnown RBP13.52□□□□□ -0.25
SEC22C-207ENST00000423701 SERTAD4-AS1Q5TG53 156 aa13.52□□□□□ -0.25
SEC22C-207ENST00000423701 PCLOQ9Y6V0 5065 aa13.52□□□□□ -0.25
SEC22C-207ENST00000423701 M0QXV9 152 aa13.5□□□□□ -0.25
SEC22C-207ENST00000423701 NMUP48645 174 aa13.49□□□□□ -0.25
SEC22C-207ENST00000423701 LINC00158P58513 81 aa13.49□□□□□ -0.25
SEC22C-207ENST00000423701 SND1-IT1Q9HBX3 110 aa13.49□□□□□ -0.25
SEC22C-207ENST00000423701 A0A0U1RRA0 63 aa13.48□□□□□ -0.25
SEC22C-207ENST00000423701 MEIG1Q5JSS6 88 aa13.48□□□□□ -0.25
SEC22C-207ENST00000423701 ATOH7Q8N100 152 aa13.48□□□□□ -0.25
SEC22C-207ENST00000423701 SMIM13P0DJ93 91 aa13.48□□□□□ -0.25
SEC22C-207ENST00000423701 PRR3P79522 188 aaKnown RBP13.47□□□□□ -0.25
SEC22C-207ENST00000423701 IGKV2D-26A0A0A0MRZ7 120 aa13.46□□□□□ -0.25
SEC22C-207ENST00000423701 INAFM2P0DMQ5 153 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms