RNA–Protein interactions for RNA: ENST00000420316.6

EGFR-204, Transcript of epidermal growth factor receptor, humanhuman

TSL 1 (best) BASIC

Gene EGFR, Length 1,570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EGFR-204ENST00000420316 F8WDY8 70 aa13.01□□□□□ -0.33
EGFR-204ENST00000420316 SYS1-DBNDD2H3BUS1 97 aa13.01□□□□□ -0.33
EGFR-204ENST00000420316 NDUFA1O15239 70 aa13.01□□□□□ -0.33
EGFR-204ENST00000420316 C3orf79P0CE67 100 aa13.01□□□□□ -0.33
EGFR-204ENST00000420316 CHTF8P0CG12 524 aa13.01□□□□□ -0.33
EGFR-204ENST00000420316 KRTDAPP60985 99 aa13.01□□□□□ -0.33
EGFR-204ENST00000420316 SNRPEP62304 92 aaKnown RBP13.01□□□□□ -0.33
EGFR-204ENST00000420316 Q8IZM0 81 aa13.01□□□□□ -0.33
EGFR-204ENST00000420316 COX7B2Q8TF08 81 aa13.01□□□□□ -0.33
EGFR-204ENST00000420316 C6orf48Q9UBA6 75 aa13□□□□□ -0.33
EGFR-204ENST00000420316 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13□□□□□ -0.33
EGFR-204ENST00000420316 C9orf116Q5BN46 136 aaPredicted RBP12.98□□□□□ -0.33
EGFR-204ENST00000420316 IGKV2-24A0A0C4DH68 120 aa12.98□□□□□ -0.33
EGFR-204ENST00000420316 TMEM223A0PJW6 202 aa12.98□□□□□ -0.33
EGFR-204ENST00000420316 DPM2O94777 84 aa12.98□□□□□ -0.33
EGFR-204ENST00000420316 CKS1BP61024 79 aa12.98□□□□□ -0.33
EGFR-204ENST00000420316 IGLV5-39A0A0G2JS06 123 aa12.97□□□□□ -0.33
EGFR-204ENST00000420316 S100A2P29034 98 aa12.97□□□□□ -0.33
EGFR-204ENST00000420316 A0A096LNI7 61 aa12.96□□□□□ -0.33
EGFR-204ENST00000420316 IGKCP01834 107 aa12.96□□□□□ -0.33
EGFR-204ENST00000420316 HIST1H2BLQ99880 126 aa12.96□□□□□ -0.33
EGFR-204ENST00000420316 PKIGQ9Y2B9 76 aa12.95□□□□□ -0.34
EGFR-204ENST00000420316 PLNP26678 52 aa12.94□□□□□ -0.34
EGFR-204ENST00000420316 GAGE2BQ13066 116 aa12.94□□□□□ -0.34
EGFR-204ENST00000420316 RNF151Q2KHN1 245 aa12.94□□□□□ -0.34
EGFR-204ENST00000420316 PET117Q6UWS5 81 aa12.94□□□□□ -0.34
EGFR-204ENST00000420316 TMA7Q9Y2S6 64 aaKnown RBP12.94□□□□□ -0.34
EGFR-204ENST00000420316 RPL18AQ02543 176 aaKnown RBP12.94□□□□□ -0.34
EGFR-204ENST00000420316 LINC01545Q5VT33 79 aa12.94□□□□□ -0.34
EGFR-204ENST00000420316 CIRBPQ14011 172 aaKnown RBP12.93□□□□□ -0.34
EGFR-204ENST00000420316 LOC107984640A0A0U1RRK4 108 aa12.92□□□□□ -0.34
EGFR-204ENST00000420316 C5orf52A6NGY3 159 aa12.92□□□□□ -0.34
EGFR-204ENST00000420316 SCXQ7RTU7 201 aa12.92□□□□□ -0.34
EGFR-204ENST00000420316 DPH3Q96FX2 82 aa12.92□□□□□ -0.34
EGFR-204ENST00000420316 MAJINQ3KP22 176 aa12.91□□□□□ -0.34
EGFR-204ENST00000420316 KRTAP17-1Q9BYP8 105 aa12.91□□□□□ -0.34
EGFR-204ENST00000420316 TRBV30A0A0K0K1B3 111 aa12.9□□□□□ -0.34
EGFR-204ENST00000420316 SMR3BP02814 79 aaPredicted RBP12.9□□□□□ -0.34
EGFR-204ENST00000420316 CIRBP-AS1Q8TBR5 109 aa12.9□□□□□ -0.34
EGFR-204ENST00000420316 ZNF625Q96I27 306 aaPredicted RBP12.9□□□□□ -0.34
EGFR-204ENST00000420316 Q6ZRP5 223 aa12.9□□□□□ -0.35
EGFR-204ENST00000420316 SPACA4Q8TDM5 124 aa12.9□□□□□ -0.35
EGFR-204ENST00000420316 CXCL5P42830 114 aa12.89□□□□□ -0.35
EGFR-204ENST00000420316 PTTG1IPP53801 180 aa12.89□□□□□ -0.35
EGFR-204ENST00000420316 TSPEAR-AS2P59090 65 aa12.89□□□□□ -0.35
EGFR-204ENST00000420316 GAGE2EQ4V326 116 aa12.89□□□□□ -0.35
EGFR-204ENST00000420316 ATOH7Q8N100 152 aa12.89□□□□□ -0.35
EGFR-204ENST00000420316 GAGE2DQ9UEU5 116 aa12.89□□□□□ -0.35
EGFR-204ENST00000420316 Q8N1X5 172 aa12.88□□□□□ -0.35
EGFR-204ENST00000420316 LINC00474Q9P2X8 69 aa12.88□□□□□ -0.35
EGFR-204ENST00000420316 A0A087WYN8 130 aa12.86□□□□□ -0.35
EGFR-204ENST00000420316 STPG4Q8N801 248 aa12.86□□□□□ -0.35
EGFR-204ENST00000420316 FAT1Q14517 4588 aa12.86□□□□□ -0.35
EGFR-204ENST00000420316 LEPROTO15243 131 aa12.85□□□□□ -0.35
EGFR-204ENST00000420316 TLX1NBP0CAT3 122 aa12.85□□□□□ -0.35
EGFR-204ENST00000420316 HERVK_113P61574 105 aa12.85□□□□□ -0.35
EGFR-204ENST00000420316 NDUFC2-KCTD14E9PQ53 114 aa12.84□□□□□ -0.35
EGFR-204ENST00000420316 PFN2P35080 140 aa12.84□□□□□ -0.35
EGFR-204ENST00000420316 C20orf202A1L168 122 aa12.83□□□□□ -0.36
EGFR-204ENST00000420316 A0A0U1RRA0 63 aa12.81□□□□□ -0.36
EGFR-204ENST00000420316 A0A1W2PNN7 141 aa12.81□□□□□ -0.36
EGFR-204ENST00000420316 FAM168BA1KXE4 195 aa12.81□□□□□ -0.36
EGFR-204ENST00000420316 J3QQQ9 107 aa12.81□□□□□ -0.36
EGFR-204ENST00000420316 XAGE1AQ9HD64 81 aa12.81□□□□□ -0.36
EGFR-204ENST00000420316 PLAC8Q9NZF1 115 aa12.81□□□□□ -0.36
EGFR-204ENST00000420316 NDUFA12Q9UI09 145 aa12.81□□□□□ -0.36
EGFR-204ENST00000420316 PLEKHB2Q96CS7 222 aa12.81□□□□□ -0.36
EGFR-204ENST00000420316 C9orf129Q5T035 196 aaKnown RBP12.8□□□□□ -0.36
EGFR-204ENST00000420316 ERG28Q9UKR5 140 aa12.8□□□□□ -0.36
EGFR-204ENST00000420316 IGKV2D-26A0A0A0MRZ7 120 aa12.79□□□□□ -0.36
EGFR-204ENST00000420316 E9PLD3 99 aa12.79□□□□□ -0.36
EGFR-204ENST00000420316 FAM229AH3BQW9 127 aa12.79□□□□□ -0.36
EGFR-204ENST00000420316 LGALS3P17931 250 aaKnown RBP12.78□□□□□ -0.36
EGFR-204ENST00000420316 EPM2AB3EWF7 344 aa12.77□□□□□ -0.36
EGFR-204ENST00000420316 ANKRD39Q53RE8 183 aa12.77□□□□□ -0.36
EGFR-204ENST00000420316 TTTY13Q9BZ97 58 aa12.77□□□□□ -0.36
EGFR-204ENST00000420316 FAM19A5Q7Z5A7 132 aaPredicted RBP12.77□□□□□ -0.37
EGFR-204ENST00000420316 LINC00528Q8N1L1 170 aa12.77□□□□□ -0.37
EGFR-204ENST00000420316 SCGB1D1O95968 90 aa12.76□□□□□ -0.37
EGFR-204ENST00000420316 SMIM13P0DJ93 91 aa12.76□□□□□ -0.37
EGFR-204ENST00000420316 MEIG1Q5JSS6 88 aa12.76□□□□□ -0.37
EGFR-204ENST00000420316 Q5VSD8 79 aa12.76□□□□□ -0.37
EGFR-204ENST00000420316 SFTA2Q6UW10 78 aa12.76□□□□□ -0.37
EGFR-204ENST00000420316 MYMXA0A1B0GTQ4 84 aa12.75□□□□□ -0.37
EGFR-204ENST00000420316 LINC00158P58513 81 aa12.75□□□□□ -0.37
EGFR-204ENST00000420316 KRTAP7-1Q8IUC3 87 aa12.75□□□□□ -0.37
EGFR-204ENST00000420316 KRTAP4-5Q9BYR2 181 aa12.75□□□□□ -0.37
EGFR-204ENST00000420316 VPS13BQ7Z7G8 4022 aa12.73□□□□□ -0.37
EGFR-204ENST00000420316 SERTAD4-AS1Q5TG53 156 aa12.73□□□□□ -0.37
EGFR-204ENST00000420316 HERV-K104P63124 156 aa12.72□□□□□ -0.37
EGFR-204ENST00000420316 PHF5AQ7RTV0 110 aaKnown RBP12.72□□□□□ -0.37
EGFR-204ENST00000420316 NMUP48645 174 aa12.71□□□□□ -0.37
EGFR-204ENST00000420316 SND1-IT1Q9HBX3 110 aa12.71□□□□□ -0.37
EGFR-204ENST00000420316 PLA2G1BP04054 148 aaKnown RBP12.7□□□□□ -0.38
EGFR-204ENST00000420316 DAND5Q8N907 189 aa12.7□□□□□ -0.38
EGFR-204ENST00000420316 SRRM2Q9UQ35 2752 aaKnown RBP12.69□□□□□ -0.38
EGFR-204ENST00000420316 COX17Q14061 63 aa12.69□□□□□ -0.38
EGFR-204ENST00000420316 ABCA13Q86UQ4 5058 aa12.69□□□□□ -0.38
EGFR-204ENST00000420316 A0A0J9YXY3 114 aa12.68□□□□□ -0.38
EGFR-204ENST00000420316 ZNF815PA8K554 130 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 247.7 ms