RNA–Protein interactions for RNA: ENST00000417628.6

ECHDC1-206, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-206ENST00000417628 IGKV1-12A0A0C4DH73 117 aa3.86□□□□□ -1.79
ECHDC1-206ENST00000417628 IQCF6A8MYZ5 107 aa3.86□□□□□ -1.79
ECHDC1-206ENST00000417628 ERC2-IT1O76042 136 aa3.86□□□□□ -1.79
ECHDC1-206ENST00000417628 IGKV1D-12P01611 117 aa3.86□□□□□ -1.79
ECHDC1-206ENST00000417628 ARMS2P0C7Q2 107 aa3.86□□□□□ -1.79
ECHDC1-206ENST00000417628 ZNF22P17026 224 aaPredicted RBP3.86□□□□□ -1.79
ECHDC1-206ENST00000417628 CD24P25063 80 aa3.86□□□□□ -1.79
ECHDC1-206ENST00000417628 XCL1P47992 114 aa3.86□□□□□ -1.79
ECHDC1-206ENST00000417628 ZNF137PP52743 207 aa3.86□□□□□ -1.79
ECHDC1-206ENST00000417628 APOC4P55056 127 aa3.86□□□□□ -1.79
ECHDC1-206ENST00000417628 SNRPD3P62318 126 aaKnown RBP3.86□□□□□ -1.79
ECHDC1-206ENST00000417628 PLGLAQ15195 96 aa3.86□□□□□ -1.79
ECHDC1-206ENST00000417628 PIGYQ3MUY2 71 aa3.86□□□□□ -1.79
ECHDC1-206ENST00000417628 MRPL51Q4U2R6 128 aaKnown RBP3.86□□□□□ -1.79
ECHDC1-206ENST00000417628 C10orf128Q5T292 105 aa3.86□□□□□ -1.79
ECHDC1-206ENST00000417628 LELP1Q5T871 98 aa3.86□□□□□ -1.79
ECHDC1-206ENST00000417628 MINOS1Q5TGZ0 78 aa3.86□□□□□ -1.79
ECHDC1-206ENST00000417628 SPTSSAQ969W0 71 aa3.86□□□□□ -1.79
ECHDC1-206ENST00000417628 XCL2Q9UBD3 114 aa3.86□□□□□ -1.79
ECHDC1-206ENST00000417628 UBE2D4Q9Y2X8 147 aa3.86□□□□□ -1.79
ECHDC1-206ENST00000417628 MINOS1-NBL1R4GNA1 71 aa3.86□□□□□ -1.79
ECHDC1-206ENST00000417628 TRAV41A0A0B4J266 112 aa3.85□□□□□ -1.79
ECHDC1-206ENST00000417628 TIMM17BO60830 172 aa3.85□□□□□ -1.79
ECHDC1-206ENST00000417628 NXPH4O95158 308 aa3.85□□□□□ -1.79
ECHDC1-206ENST00000417628 RBM12B-AS1Q9P1G2 102 aa3.85□□□□□ -1.79
ECHDC1-206ENST00000417628 ICOSQ9Y6W8 199 aa3.85□□□□□ -1.79
ECHDC1-206ENST00000417628 VPS13BQ7Z7G8 4022 aa3.85□□□□□ -1.79
ECHDC1-206ENST00000417628 IGKV1-27A0A075B6S5 117 aa3.84□□□□□ -1.79
ECHDC1-206ENST00000417628 C11orf86A6NJI1 115 aa3.84□□□□□ -1.79
ECHDC1-206ENST00000417628 SMR3BP02814 79 aaPredicted RBP3.84□□□□□ -1.79
ECHDC1-206ENST00000417628 CKS2P33552 79 aa3.84□□□□□ -1.79
ECHDC1-206ENST00000417628 RHOHQ15669 191 aa3.84□□□□□ -1.79
ECHDC1-206ENST00000417628 ZNF826PQ6ZT77 177 aa3.84□□□□□ -1.79
ECHDC1-206ENST00000417628 Q6ZVQ6 151 aa3.84□□□□□ -1.79
ECHDC1-206ENST00000417628 SMIM29Q86T20 159 aa3.84□□□□□ -1.79
ECHDC1-206ENST00000417628 C11orf45Q8TAV5 145 aa3.84□□□□□ -1.79
ECHDC1-206ENST00000417628 FXYD5Q96DB9 178 aa3.84□□□□□ -1.79
ECHDC1-206ENST00000417628 IGHV4-4A0A075B6R2 117 aa3.83□□□□□ -1.8
ECHDC1-206ENST00000417628 A0A0J9YXY3 114 aa3.83□□□□□ -1.8
ECHDC1-206ENST00000417628 C17orf98A8MV24 154 aa3.83□□□□□ -1.8
ECHDC1-206ENST00000417628 DAD1P61803 113 aa3.83□□□□□ -1.8
ECHDC1-206ENST00000417628 LAGE3Q14657 143 aa3.83□□□□□ -1.8
ECHDC1-206ENST00000417628 C2orf83Q53S99 150 aa3.83□□□□□ -1.8
ECHDC1-206ENST00000417628 FAM53AQ6NSI3 398 aaPredicted RBP3.83□□□□□ -1.8
ECHDC1-206ENST00000417628 PHF5AQ7RTV0 110 aaKnown RBP3.83□□□□□ -1.8
ECHDC1-206ENST00000417628 C5orf56Q8N8D9 126 aa3.83□□□□□ -1.8
ECHDC1-206ENST00000417628 DEFB104AQ8WTQ1 72 aa3.83□□□□□ -1.8
ECHDC1-206ENST00000417628 GAFA1Q96PS6 74 aa3.83□□□□□ -1.8
ECHDC1-206ENST00000417628 WFDC10AQ9H1F0 79 aa3.83□□□□□ -1.8
ECHDC1-206ENST00000417628 TMEM14CQ9P0S9 112 aa3.83□□□□□ -1.8
ECHDC1-206ENST00000417628 TIMM8BQ9Y5J9 83 aaPredicted RBP3.83□□□□□ -1.8
ECHDC1-206ENST00000417628 IGKV1D-43A0A0B4J1Z2 117 aa3.82□□□□□ -1.8
ECHDC1-206ENST00000417628 SH2D1AO60880 128 aa3.82□□□□□ -1.8
ECHDC1-206ENST00000417628 CCL3L1P16619 93 aa3.82□□□□□ -1.8
ECHDC1-206ENST00000417628 UBE2BP63146 152 aa3.82□□□□□ -1.8
ECHDC1-206ENST00000417628 ECSCRQ19T08 205 aa3.82□□□□□ -1.8
ECHDC1-206ENST00000417628 Q1T7F1 81 aa3.82□□□□□ -1.8
ECHDC1-206ENST00000417628 ESRGQ1W209 222 aa3.82□□□□□ -1.8
ECHDC1-206ENST00000417628 LYPD5Q6UWN5 251 aa3.82□□□□□ -1.8
ECHDC1-206ENST00000417628 WDR86Q86TI4 376 aa3.82□□□□□ -1.8
ECHDC1-206ENST00000417628 ZNF491Q8N8L2 437 aa3.82□□□□□ -1.8
ECHDC1-206ENST00000417628 DYNLRB2Q8TF09 96 aa3.82□□□□□ -1.8
ECHDC1-206ENST00000417628 TOMM6Q96B49 74 aa3.82□□□□□ -1.8
ECHDC1-206ENST00000417628 AMELXQ99217 191 aa3.82□□□□□ -1.8
ECHDC1-206ENST00000417628 TNCP24821 2201 aa3.82□□□□□ -1.8
ECHDC1-206ENST00000417628 SMKR1H3BMG3 65 aa3.81□□□□□ -1.8
ECHDC1-206ENST00000417628 UBE2L6O14933 153 aa3.81□□□□□ -1.8
ECHDC1-206ENST00000417628 TFF1P04155 84 aa3.81□□□□□ -1.8
ECHDC1-206ENST00000417628 RNASE2P10153 161 aaKnown RBP3.81□□□□□ -1.8
ECHDC1-206ENST00000417628 Q1RN00 199 aa3.81□□□□□ -1.8
ECHDC1-206ENST00000417628 DEFB135Q30KP9 77 aa3.81□□□□□ -1.8
ECHDC1-206ENST00000417628 FAM27BQ5VT28 67 aa3.81□□□□□ -1.8
ECHDC1-206ENST00000417628 TMEM14BQ9NUH8 114 aa3.81□□□□□ -1.8
ECHDC1-206ENST00000417628 FSIP2Q5CZC0 6907 aa3.81□□□□□ -1.8
ECHDC1-206ENST00000417628 IGKV2D-30A0A075B6S6 120 aa3.8□□□□□ -1.8
ECHDC1-206ENST00000417628 A0A087WW49 117 aa3.8□□□□□ -1.8
ECHDC1-206ENST00000417628 LOC389332A0A1B0GUA5 103 aa3.8□□□□□ -1.8
ECHDC1-206ENST00000417628 FAM223BA6NKX1 122 aa3.8□□□□□ -1.8
ECHDC1-206ENST00000417628 C8orf87E5RJ46 101 aa3.8□□□□□ -1.8
ECHDC1-206ENST00000417628 M0R381 172 aa3.8□□□□□ -1.8
ECHDC1-206ENST00000417628 COX7A2LO14548 114 aa3.8□□□□□ -1.8
ECHDC1-206ENST00000417628 DNAL4O96015 105 aa3.8□□□□□ -1.8
ECHDC1-206ENST00000417628 IGLV2-11P01706 119 aa3.8□□□□□ -1.8
ECHDC1-206ENST00000417628 ZNF80P51504 273 aaPredicted RBP3.8□□□□□ -1.8
ECHDC1-206ENST00000417628 LINC01547P58512 204 aaPredicted RBP3.8□□□□□ -1.8
ECHDC1-206ENST00000417628 RBM3P98179 157 aaKnown RBP3.8□□□□□ -1.8
ECHDC1-206ENST00000417628 C10orf113Q5VZT2 155 aa3.8□□□□□ -1.8
ECHDC1-206ENST00000417628 UBE2DNLQ8IWF7 75 aa3.8□□□□□ -1.8
ECHDC1-206ENST00000417628 FAM223AQ8IWN6 122 aa3.8□□□□□ -1.8
ECHDC1-206ENST00000417628 C20orf197Q8N268 126 aa3.8□□□□□ -1.8
ECHDC1-206ENST00000417628 RNF185Q96GF1 192 aa3.8□□□□□ -1.8
ECHDC1-206ENST00000417628 OBSCN-AS1Q96MR7 158 aa3.8□□□□□ -1.8
ECHDC1-206ENST00000417628 SCGB3A1Q96QR1 104 aa3.8□□□□□ -1.8
ECHDC1-206ENST00000417628 DNAH5Q8TE73 4624 aa3.8□□□□□ -1.8
ECHDC1-206ENST00000417628 NACAE9PAV3 2078 aa3.8□□□□□ -1.8
ECHDC1-206ENST00000417628 LOC100131303A0A0U1RQF7 123 aa3.79□□□□□ -1.8
ECHDC1-206ENST00000417628 TMEM30CPA0ZSE6 113 aa3.79□□□□□ -1.8
ECHDC1-206ENST00000417628 IGIPA6NJ69 53 aa3.79□□□□□ -1.8
ECHDC1-206ENST00000417628 LEPROTO15243 131 aa3.79□□□□□ -1.8
ECHDC1-206ENST00000417628 PPP1R17O96001 155 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms