RNA–Protein interactions for RNA: ENST00000416319.5

FAM3A-207, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 5

Gene FAM3A, Length 1,113 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-207ENST00000416319 TRBV30A0A0K0K1B3 111 aa12.69□□□□□ -0.38
FAM3A-207ENST00000416319 H0Y8G0 127 aa12.69□□□□□ -0.38
FAM3A-207ENST00000416319 CKS1BP61024 79 aa12.69□□□□□ -0.38
FAM3A-207ENST00000416319 CIRBPQ14011 172 aaKnown RBP12.69□□□□□ -0.38
FAM3A-207ENST00000416319 UNQ6190/PRO20217Q6UXQ8 127 aa12.69□□□□□ -0.38
FAM3A-207ENST00000416319 COX7B2Q8TF08 81 aa12.69□□□□□ -0.38
FAM3A-207ENST00000416319 SYS1-DBNDD2H3BUS1 97 aa12.68□□□□□ -0.38
FAM3A-207ENST00000416319 C10orf25Q5T742 122 aa12.68□□□□□ -0.38
FAM3A-207ENST00000416319 C2orf82Q6UX34 121 aa12.67□□□□□ -0.38
FAM3A-207ENST00000416319 LINC00474Q9P2X8 69 aa12.67□□□□□ -0.38
FAM3A-207ENST00000416319 C6orf48Q9UBA6 75 aa12.67□□□□□ -0.38
FAM3A-207ENST00000416319 LOC107984640A0A0U1RRK4 108 aa12.66□□□□□ -0.38
FAM3A-207ENST00000416319 TMEM223A0PJW6 202 aa12.66□□□□□ -0.38
FAM3A-207ENST00000416319 DPM2O94777 84 aa12.66□□□□□ -0.38
FAM3A-207ENST00000416319 S100A6P06703 90 aa12.66□□□□□ -0.38
FAM3A-207ENST00000416319 TLX1NBP0CAT3 122 aa12.66□□□□□ -0.38
FAM3A-207ENST00000416319 PET117Q6UWS5 81 aa12.66□□□□□ -0.38
FAM3A-207ENST00000416319 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.65□□□□□ -0.38
FAM3A-207ENST00000416319 HIST3H2BBQ8N257 126 aa12.64□□□□□ -0.39
FAM3A-207ENST00000416319 SPACA4Q8TDM5 124 aa12.64□□□□□ -0.39
FAM3A-207ENST00000416319 IGKCP01834 107 aa12.63□□□□□ -0.39
FAM3A-207ENST00000416319 C3orf79P0CE67 100 aa12.63□□□□□ -0.39
FAM3A-207ENST00000416319 LINC01545Q5VT33 79 aa12.63□□□□□ -0.39
FAM3A-207ENST00000416319 A0A096LNI7 61 aa12.62□□□□□ -0.39
FAM3A-207ENST00000416319 PANO1I0J062 215 aa12.62□□□□□ -0.39
FAM3A-207ENST00000416319 SFTA2Q6UW10 78 aa12.62□□□□□ -0.39
FAM3A-207ENST00000416319 SCXQ7RTU7 201 aa12.62□□□□□ -0.39
FAM3A-207ENST00000416319 FAT1Q14517 4588 aa12.61□□□□□ -0.39
FAM3A-207ENST00000416319 PTTG1IPP53801 180 aa12.61□□□□□ -0.39
FAM3A-207ENST00000416319 CIRBP-AS1Q8TBR5 109 aa12.61□□□□□ -0.39
FAM3A-207ENST00000416319 PMCHL2Q9BQD1 86 aa12.61□□□□□ -0.39
FAM3A-207ENST00000416319 NDUFC2-KCTD14E9PQ53 114 aa12.6□□□□□ -0.39
FAM3A-207ENST00000416319 CHTF8P0CG12 524 aa12.6□□□□□ -0.39
FAM3A-207ENST00000416319 S100A2P29034 98 aa12.6□□□□□ -0.39
FAM3A-207ENST00000416319 HIST1H2BLQ99880 126 aa12.6□□□□□ -0.39
FAM3A-207ENST00000416319 IGKV2-24A0A0C4DH68 120 aa12.59□□□□□ -0.39
FAM3A-207ENST00000416319 KRTDAPP60985 99 aa12.59□□□□□ -0.39
FAM3A-207ENST00000416319 C5orf52A6NGY3 159 aa12.58□□□□□ -0.4
FAM3A-207ENST00000416319 GAGE2BQ13066 116 aa12.58□□□□□ -0.4
FAM3A-207ENST00000416319 HERVK_113P61574 105 aa12.57□□□□□ -0.4
FAM3A-207ENST00000416319 SNRPEP62304 92 aaKnown RBP12.57□□□□□ -0.4
FAM3A-207ENST00000416319 HAMPP81172 84 aa12.57□□□□□ -0.4
FAM3A-207ENST00000416319 RPL18AQ02543 176 aaKnown RBP12.57□□□□□ -0.4
FAM3A-207ENST00000416319 MAJINQ3KP22 176 aa12.57□□□□□ -0.4
FAM3A-207ENST00000416319 Q6ZRP5 223 aa12.57□□□□□ -0.4
FAM3A-207ENST00000416319 PLAC8Q9NZF1 115 aa12.57□□□□□ -0.4
FAM3A-207ENST00000416319 A0A087WYN8 130 aa12.56□□□□□ -0.4
FAM3A-207ENST00000416319 C20orf202A1L168 122 aa12.56□□□□□ -0.4
FAM3A-207ENST00000416319 AKR1D1P51857 326 aa12.56□□□□□ -0.4
FAM3A-207ENST00000416319 C9orf116Q5BN46 136 aaPredicted RBP12.56□□□□□ -0.4
FAM3A-207ENST00000416319 DPH3Q96FX2 82 aa12.56□□□□□ -0.4
FAM3A-207ENST00000416319 ZNF625Q96I27 306 aaPredicted RBP12.56□□□□□ -0.4
FAM3A-207ENST00000416319 EPM2AB3EWF7 344 aa12.54□□□□□ -0.4
FAM3A-207ENST00000416319 LEPROTO15243 131 aa12.54□□□□□ -0.4
FAM3A-207ENST00000416319 Q8N1X5 172 aa12.54□□□□□ -0.4
FAM3A-207ENST00000416319 PLEKHB2Q96CS7 222 aa12.54□□□□□ -0.4
FAM3A-207ENST00000416319 STPG4Q8N801 248 aa12.53□□□□□ -0.4
FAM3A-207ENST00000416319 COX17Q14061 63 aa12.52□□□□□ -0.41
FAM3A-207ENST00000416319 E9PLD3 99 aa12.51□□□□□ -0.41
FAM3A-207ENST00000416319 GAGE2EQ4V326 116 aa12.51□□□□□ -0.41
FAM3A-207ENST00000416319 GAGE2DQ9UEU5 116 aa12.51□□□□□ -0.41
FAM3A-207ENST00000416319 HERV-K104P63124 156 aa12.5□□□□□ -0.41
FAM3A-207ENST00000416319 NDUFA12Q9UI09 145 aa12.5□□□□□ -0.41
FAM3A-207ENST00000416319 J3QQQ9 107 aa12.49□□□□□ -0.41
FAM3A-207ENST00000416319 SMR3BP02814 79 aaPredicted RBP12.49□□□□□ -0.41
FAM3A-207ENST00000416319 NMUP48645 174 aa12.49□□□□□ -0.41
FAM3A-207ENST00000416319 ERG28Q9UKR5 140 aa12.49□□□□□ -0.41
FAM3A-207ENST00000416319 MYMXA0A1B0GTQ4 84 aa12.48□□□□□ -0.41
FAM3A-207ENST00000416319 TSPEAR-AS2P59090 65 aa12.48□□□□□ -0.41
FAM3A-207ENST00000416319 A0A1W2PNN7 141 aa12.47□□□□□ -0.41
FAM3A-207ENST00000416319 FAM229AH3BQW9 127 aa12.47□□□□□ -0.41
FAM3A-207ENST00000416319 C9orf129Q5T035 196 aaKnown RBP12.47□□□□□ -0.41
FAM3A-207ENST00000416319 KRTAP17-1Q9BYP8 105 aa12.47□□□□□ -0.41
FAM3A-207ENST00000416319 LINC00587B1AMM8 73 aa12.46□□□□□ -0.41
FAM3A-207ENST00000416319 LGALS3P17931 250 aaKnown RBP12.46□□□□□ -0.41
FAM3A-207ENST00000416319 LINC00528Q8N1L1 170 aa12.46□□□□□ -0.41
FAM3A-207ENST00000416319 VPS13BQ7Z7G8 4022 aa12.46□□□□□ -0.42
FAM3A-207ENST00000416319 PFN2P35080 140 aa12.44□□□□□ -0.42
FAM3A-207ENST00000416319 Q5VSD8 79 aa12.43□□□□□ -0.42
FAM3A-207ENST00000416319 XAGE1AQ9HD64 81 aa12.43□□□□□ -0.42
FAM3A-207ENST00000416319 ABCA13Q86UQ4 5058 aa12.43□□□□□ -0.42
FAM3A-207ENST00000416319 C7orf33Q8WU49 177 aa12.42□□□□□ -0.42
FAM3A-207ENST00000416319 PLA2G2DQ9UNK4 145 aa12.42□□□□□ -0.42
FAM3A-207ENST00000416319 FAM168BA1KXE4 195 aa12.41□□□□□ -0.42
FAM3A-207ENST00000416319 PLA2G1BP04054 148 aaKnown RBP12.4□□□□□ -0.42
FAM3A-207ENST00000416319 LINC00158P58513 81 aa12.4□□□□□ -0.42
FAM3A-207ENST00000416319 MEIG1Q5JSS6 88 aa12.4□□□□□ -0.42
FAM3A-207ENST00000416319 KRTAP7-1Q8IUC3 87 aa12.4□□□□□ -0.42
FAM3A-207ENST00000416319 SND1-IT1Q9HBX3 110 aa12.4□□□□□ -0.42
FAM3A-207ENST00000416319 ATOH7Q8N100 152 aa12.39□□□□□ -0.43
FAM3A-207ENST00000416319 SRRM2Q9UQ35 2752 aaKnown RBP12.38□□□□□ -0.43
FAM3A-207ENST00000416319 IGKV2D-26A0A0A0MRZ7 120 aa12.38□□□□□ -0.43
FAM3A-207ENST00000416319 SMIM13P0DJ93 91 aa12.38□□□□□ -0.43
FAM3A-207ENST00000416319 FAM19A5Q7Z5A7 132 aaPredicted RBP12.38□□□□□ -0.43
FAM3A-207ENST00000416319 TP73-AS1Q9UF72 201 aa12.37□□□□□ -0.43
FAM3A-207ENST00000416319 RPL37AP61513 92 aaKnown RBP12.36□□□□□ -0.43
FAM3A-207ENST00000416319 ANKRD39Q53RE8 183 aa12.36□□□□□ -0.43
FAM3A-207ENST00000416319 SERTAD4-AS1Q5TG53 156 aa12.36□□□□□ -0.43
FAM3A-207ENST00000416319 TMA7Q9Y2S6 64 aaKnown RBP12.36□□□□□ -0.43
FAM3A-207ENST00000416319 IGLV5-37A0A075B6J1 123 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms