RNA–Protein interactions for RNA: ENST00000415749.1

EPHA4-204, Transcript of EPH receptor A4, humanhuman

TSL 4

Gene EPHA4, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-204ENST00000415749 ST20Q9HBF5 79 aa3.86□□□□□ -1.79
EPHA4-204ENST00000415749 SMPXQ9UHP9 88 aa3.86□□□□□ -1.79
EPHA4-204ENST00000415749 IGHV3OR16-8A0A075B7F1 116 aa3.85□□□□□ -1.79
EPHA4-204ENST00000415749 SMR3BP02814 79 aaPredicted RBP3.85□□□□□ -1.79
EPHA4-204ENST00000415749 SPART-AS1P0CW21 52 aa3.85□□□□□ -1.79
EPHA4-204ENST00000415749 PRB4P10163 310 aaPredicted RBP3.85□□□□□ -1.79
EPHA4-204ENST00000415749 ZNF25P17030 456 aaPredicted RBP3.85□□□□□ -1.79
EPHA4-204ENST00000415749 S100A7P31151 101 aa3.85□□□□□ -1.79
EPHA4-204ENST00000415749 DEFB131AP59861 70 aa3.85□□□□□ -1.79
EPHA4-204ENST00000415749 KRTAP10-5P60370 271 aa3.85□□□□□ -1.79
EPHA4-204ENST00000415749 DEFB116Q30KQ4 102 aa3.85□□□□□ -1.79
EPHA4-204ENST00000415749 COL5A1-AS1Q5SY13 56 aa3.85□□□□□ -1.79
EPHA4-204ENST00000415749 NEGR1Q7Z3B1 354 aa3.85□□□□□ -1.79
EPHA4-204ENST00000415749 Q8TAT8 98 aa3.85□□□□□ -1.79
EPHA4-204ENST00000415749 SLC50A1Q9BRV3 221 aa3.85□□□□□ -1.79
EPHA4-204ENST00000415749 RHPN1-AS1Q9BWJ2 59 aa3.85□□□□□ -1.79
EPHA4-204ENST00000415749 TMEM191AQ9H0A3 160 aa3.85□□□□□ -1.79
EPHA4-204ENST00000415749 HSPB8Q9UJY1 196 aa3.85□□□□□ -1.79
EPHA4-204ENST00000415749 NDUFA4O00483 81 aa3.84□□□□□ -1.79
EPHA4-204ENST00000415749 NCR2O95944 276 aa3.84□□□□□ -1.79
EPHA4-204ENST00000415749 FGF6P10767 208 aa3.84□□□□□ -1.79
EPHA4-204ENST00000415749 IFI27P40305 119 aaPredicted RBP3.84□□□□□ -1.79
EPHA4-204ENST00000415749 Q6ZRU5 148 aa3.84□□□□□ -1.79
EPHA4-204ENST00000415749 AMN1Q8IY45 258 aa3.84□□□□□ -1.79
EPHA4-204ENST00000415749 FER1L6-AS1Q8NA97 138 aa3.84□□□□□ -1.79
EPHA4-204ENST00000415749 PRELID3AQ96N28 172 aa3.84□□□□□ -1.79
EPHA4-204ENST00000415749 AGPAT4-IT1Q9H0P7 198 aa3.84□□□□□ -1.79
EPHA4-204ENST00000415749 TP73-AS1Q9UF72 201 aa3.84□□□□□ -1.79
EPHA4-204ENST00000415749 TMSB15BA0A087X1C1 80 aa3.83□□□□□ -1.8
EPHA4-204ENST00000415749 FABP5P3A8MUU1 101 aa3.83□□□□□ -1.8
EPHA4-204ENST00000415749 D6R8Y8 96 aa3.83□□□□□ -1.8
EPHA4-204ENST00000415749 PANO1I0J062 215 aa3.83□□□□□ -1.8
EPHA4-204ENST00000415749 NPYP01303 97 aa3.83□□□□□ -1.8
EPHA4-204ENST00000415749 COX8AP10176 69 aa3.83□□□□□ -1.8
EPHA4-204ENST00000415749 HTN3P15516 51 aa3.83□□□□□ -1.8
EPHA4-204ENST00000415749 HIST1H1AQ02539 215 aaPredicted RBP3.83□□□□□ -1.8
EPHA4-204ENST00000415749 C2orf91Q6ZV80 131 aa3.83□□□□□ -1.8
EPHA4-204ENST00000415749 OR10AG1Q8NH19 301 aa3.83□□□□□ -1.8
EPHA4-204ENST00000415749 KIF25-AS1Q9Y6Z4 181 aa3.83□□□□□ -1.8
EPHA4-204ENST00000415749 KNCNA6PVL3 124 aa3.82□□□□□ -1.8
EPHA4-204ENST00000415749 PPBPP02775 128 aa3.82□□□□□ -1.8
EPHA4-204ENST00000415749 EMP1P54849 157 aa3.82□□□□□ -1.8
EPHA4-204ENST00000415749 BVES-AS1Q5T3Y7 98 aa3.82□□□□□ -1.8
EPHA4-204ENST00000415749 PRR9Q5T870 116 aa3.82□□□□□ -1.8
EPHA4-204ENST00000415749 RNF182Q8N6D2 247 aa3.82□□□□□ -1.8
EPHA4-204ENST00000415749 C15orf53Q8NAA6 179 aa3.82□□□□□ -1.8
EPHA4-204ENST00000415749 PMCHL2Q9BQD1 86 aa3.82□□□□□ -1.8
EPHA4-204ENST00000415749 LENEPQ9Y5L5 61 aa3.82□□□□□ -1.8
EPHA4-204ENST00000415749 HMCN2Q8NDA2 5059 aa3.81□□□□□ -1.8
EPHA4-204ENST00000415749 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.81□□□□□ -1.8
EPHA4-204ENST00000415749 TAX1BP3O14907 124 aa3.81□□□□□ -1.8
EPHA4-204ENST00000415749 CCL25O15444 150 aa3.81□□□□□ -1.8
EPHA4-204ENST00000415749 HBDP02042 147 aa3.81□□□□□ -1.8
EPHA4-204ENST00000415749 FCER1GP30273 86 aa3.81□□□□□ -1.8
EPHA4-204ENST00000415749 HINT1P49773 126 aaPredicted RBP3.81□□□□□ -1.8
EPHA4-204ENST00000415749 BATFQ16520 125 aa3.81□□□□□ -1.8
EPHA4-204ENST00000415749 TMEM97Q5BJF2 176 aa3.81□□□□□ -1.8
EPHA4-204ENST00000415749 SLC25A34Q6PIV7 304 aa3.81□□□□□ -1.8
EPHA4-204ENST00000415749 Q6ZQT7 251 aa3.81□□□□□ -1.8
EPHA4-204ENST00000415749 ZFAND2AQ8N6M9 145 aa3.81□□□□□ -1.8
EPHA4-204ENST00000415749 Q8N8P6 123 aa3.81□□□□□ -1.8
EPHA4-204ENST00000415749 OR8A1Q8NGG7 326 aa3.81□□□□□ -1.8
EPHA4-204ENST00000415749 GTSF1LQ9H1H1 148 aa3.81□□□□□ -1.8
EPHA4-204ENST00000415749 VPS13BQ7Z7G8 4022 aa3.81□□□□□ -1.8
EPHA4-204ENST00000415749 TRAV2A0A0B4J234 112 aa3.8□□□□□ -1.8
EPHA4-204ENST00000415749 MUC21A0A0G2JKD1 596 aa3.8□□□□□ -1.8
EPHA4-204ENST00000415749 MUC21A0A140T8X8 626 aa3.8□□□□□ -1.8
EPHA4-204ENST00000415749 CKS2P33552 79 aa3.8□□□□□ -1.8
EPHA4-204ENST00000415749 FUSP35637 526 aaKnown RBP eCLIP3.8□□□□□ -1.8
EPHA4-204ENST00000415749 CCL18P55774 89 aa3.8□□□□□ -1.8
EPHA4-204ENST00000415749 KRTAP10-1P60331 282 aa3.8□□□□□ -1.8
EPHA4-204ENST00000415749 LCE3CQ5T5A8 94 aa3.8□□□□□ -1.8
EPHA4-204ENST00000415749 IFI27L1Q96BM0 104 aa3.8□□□□□ -1.8
EPHA4-204ENST00000415749 LINC00477Q96M19 166 aa3.8□□□□□ -1.8
EPHA4-204ENST00000415749 HHLA3Q9XRX5 114 aa3.8□□□□□ -1.8
EPHA4-204ENST00000415749 K7EP13 123 aa3.79□□□□□ -1.8
EPHA4-204ENST00000415749 FXYD7P58549 80 aa3.79□□□□□ -1.8
EPHA4-204ENST00000415749 HERVK_113P63121 156 aa3.79□□□□□ -1.8
EPHA4-204ENST00000415749 TMEM78Q5T7P6 136 aa3.79□□□□□ -1.8
EPHA4-204ENST00000415749 SIGMAR1Q99720 223 aa3.79□□□□□ -1.8
EPHA4-204ENST00000415749 NXT2Q9NPJ8 142 aaKnown RBP3.79□□□□□ -1.8
EPHA4-204ENST00000415749 LINC00588Q9Y4M8 146 aa3.79□□□□□ -1.8
EPHA4-204ENST00000415749 HLA-DRB4P13762 266 aa3.78□□□□□ -1.8
EPHA4-204ENST00000415749 EVI2AP22794 236 aa3.78□□□□□ -1.8
EPHA4-204ENST00000415749 LINC00315P59091 139 aa3.78□□□□□ -1.8
EPHA4-204ENST00000415749 PSMG4Q5JS54 123 aa3.78□□□□□ -1.8
EPHA4-204ENST00000415749 C1orf158Q8N1D5 194 aa3.78□□□□□ -1.8
EPHA4-204ENST00000415749 HIGD1BQ9P298 99 aa3.78□□□□□ -1.8
EPHA4-204ENST00000415749 HLA-DRB4X5D2U9 266 aa3.78□□□□□ -1.8
EPHA4-204ENST00000415749 TRAV21A0A0B4J279 112 aa3.77□□□□□ -1.81
EPHA4-204ENST00000415749 M0R381 172 aa3.77□□□□□ -1.81
EPHA4-204ENST00000415749 RNASE3P12724 160 aaKnown RBP3.77□□□□□ -1.81
EPHA4-204ENST00000415749 SEC11AP67812 179 aa3.77□□□□□ -1.81
EPHA4-204ENST00000415749 PMAIP1Q13794 54 aa3.77□□□□□ -1.81
EPHA4-204ENST00000415749 SH2D6Q7Z4S9 175 aa3.77□□□□□ -1.81
EPHA4-204ENST00000415749 DCANP1Q8TF63 244 aa3.77□□□□□ -1.81
EPHA4-204ENST00000415749 DEFB104AQ8WTQ1 72 aa3.77□□□□□ -1.81
EPHA4-204ENST00000415749 PKIGQ9Y2B9 76 aa3.77□□□□□ -1.81
EPHA4-204ENST00000415749 A0A087WX48 190 aa3.76□□□□□ -1.81
EPHA4-204ENST00000415749 IGKV2D-26A0A0A0MRZ7 120 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms