RNA–Protein interactions for RNA: ENST00000414978.5

MCF2-204, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,813 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-204ENST00000414978 FAT1Q14517 4588 aa1.54□□□□□ -2.16
MCF2-204ENST00000414978 M0R3E3 92 aa1.54□□□□□ -2.16
MCF2-204ENST00000414978 NDUFC2O95298 119 aa1.54□□□□□ -2.16
MCF2-204ENST00000414978 TRGC2P03986 189 aa1.54□□□□□ -2.16
MCF2-204ENST00000414978 CD7P09564 240 aa1.54□□□□□ -2.16
MCF2-204ENST00000414978 DNLZQ5SXM8 178 aa1.54□□□□□ -2.16
MCF2-204ENST00000414978 ZFP30Q9Y2G7 519 aa1.54□□□□□ -2.16
MCF2-204ENST00000414978 V9GYV3 84 aa1.54□□□□□ -2.16
MCF2-204ENST00000414978 IGKV2-40A0A087WW87 121 aaPredicted RBP1.53□□□□□ -2.16
MCF2-204ENST00000414978 TRBV6-1A0A0K0K1D8 114 aa1.53□□□□□ -2.16
MCF2-204ENST00000414978 IGKV2D-40P01614 121 aaPredicted RBP1.53□□□□□ -2.16
MCF2-204ENST00000414978 PRM2P04554 102 aa1.53□□□□□ -2.16
MCF2-204ENST00000414978 AKR1D1P51857 326 aa1.53□□□□□ -2.16
MCF2-204ENST00000414978 NDUFA6P56556 154 aa1.53□□□□□ -2.16
MCF2-204ENST00000414978 KRTAP10-8P60410 259 aa1.53□□□□□ -2.16
MCF2-204ENST00000414978 SMIM27A0A1W2PRY6 76 aa1.53□□□□□ -2.16
MCF2-204ENST00000414978 J3QQQ9 107 aa1.53□□□□□ -2.16
MCF2-204ENST00000414978 K7ERJ3 54 aa1.53□□□□□ -2.16
MCF2-204ENST00000414978 SPINK4O60575 86 aa1.53□□□□□ -2.16
MCF2-204ENST00000414978 PRB4P10163 310 aaPredicted RBP1.53□□□□□ -2.16
MCF2-204ENST00000414978 C10orf99Q6UWK7 81 aa1.53□□□□□ -2.16
MCF2-204ENST00000414978 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.53□□□□□ -2.16
MCF2-204ENST00000414978 C1orf64Q8NEQ6 169 aa1.53□□□□□ -2.16
MCF2-204ENST00000414978 TSKUQ8WUA8 353 aa1.53□□□□□ -2.16
MCF2-204ENST00000414978 RHPN1-AS1Q9BWJ2 59 aa1.53□□□□□ -2.16
MCF2-204ENST00000414978 NAT8BQ9UHF3 227 aa1.53□□□□□ -2.16
MCF2-204ENST00000414978 NOTCH3Q9UM47 2321 aa1.53□□□□□ -2.16
MCF2-204ENST00000414978 IGKV3-7A0A075B6H7 116 aa1.53□□□□□ -2.17
MCF2-204ENST00000414978 RBAKDNA6NC62 111 aa1.53□□□□□ -2.17
MCF2-204ENST00000414978 ZNF705FA8MVS1 300 aaPredicted RBP1.53□□□□□ -2.17
MCF2-204ENST00000414978 HIST1H2BKO60814 126 aa1.53□□□□□ -2.17
MCF2-204ENST00000414978 MT-ND6P03923 174 aa1.53□□□□□ -2.17
MCF2-204ENST00000414978 HIST1H2BJP06899 126 aa1.53□□□□□ -2.17
MCF2-204ENST00000414978 TRGC1P0CF51 173 aa1.53□□□□□ -2.17
MCF2-204ENST00000414978 HIST1H2BOP23527 126 aa1.53□□□□□ -2.17
MCF2-204ENST00000414978 HIST1H2BBP33778 126 aa1.53□□□□□ -2.17
MCF2-204ENST00000414978 HIST1H2BDP58876 126 aa1.53□□□□□ -2.17
MCF2-204ENST00000414978 LINC00315P59091 139 aa1.53□□□□□ -2.17
MCF2-204ENST00000414978 HIST1H2BCP62807 126 aa1.53□□□□□ -2.17
MCF2-204ENST00000414978 MOBPQ13875 183 aa1.53□□□□□ -2.17
MCF2-204ENST00000414978 HIST2H2BEQ16778 126 aa1.53□□□□□ -2.17
MCF2-204ENST00000414978 HIST2H2BFQ5QNW6 126 aaPredicted RBP1.53□□□□□ -2.17
MCF2-204ENST00000414978 MRPL54Q6P161 138 aaKnown RBP1.53□□□□□ -2.17
MCF2-204ENST00000414978 OR4B1Q8NGF8 309 aa1.53□□□□□ -2.17
MCF2-204ENST00000414978 OR5A1Q8NGJ0 315 aa1.53□□□□□ -2.17
MCF2-204ENST00000414978 HIST1H2BHQ93079 126 aa1.53□□□□□ -2.17
MCF2-204ENST00000414978 HIST1H2BNQ99877 126 aa1.53□□□□□ -2.17
MCF2-204ENST00000414978 HIST1H2BMQ99879 126 aa1.53□□□□□ -2.17
MCF2-204ENST00000414978 HIGD1CA8MV81 97 aa1.52□□□□□ -2.17
MCF2-204ENST00000414978 CCL25O15444 150 aa1.52□□□□□ -2.17
MCF2-204ENST00000414978 LINC00694P0DN24 101 aa1.52□□□□□ -2.17
MCF2-204ENST00000414978 CBLN1P23435 193 aa1.52□□□□□ -2.17
MCF2-204ENST00000414978 SDIM1Q6ZPB5 146 aa1.52□□□□□ -2.17
MCF2-204ENST00000414978 Q8TAT8 98 aa1.52□□□□□ -2.17
MCF2-204ENST00000414978 TMEM189A5PLL7 270 aa1.52□□□□□ -2.17
MCF2-204ENST00000414978 SDHAF1A6NFY7 115 aa1.52□□□□□ -2.17
MCF2-204ENST00000414978 FABP5P3A8MUU1 101 aa1.52□□□□□ -2.17
MCF2-204ENST00000414978 OVOL1O14753 267 aa1.52□□□□□ -2.17
MCF2-204ENST00000414978 TAX1BP3O14907 124 aa1.52□□□□□ -2.17
MCF2-204ENST00000414978 HBBP68871 147 aa1.52□□□□□ -2.17
MCF2-204ENST00000414978 Q6AWC8 147 aa1.52□□□□□ -2.17
MCF2-204ENST00000414978 AMMECR1LQ6DCA0 310 aa1.52□□□□□ -2.17
MCF2-204ENST00000414978 C4orf3Q8WVX3 66 aa1.52□□□□□ -2.17
MCF2-204ENST00000414978 DNAH8Q96JB1 4490 aa1.52□□□□□ -2.17
MCF2-204ENST00000414978 DNAH5Q8TE73 4624 aa1.52□□□□□ -2.17
MCF2-204ENST00000414978 S100A8P05109 93 aa1.52□□□□□ -2.17
MCF2-204ENST00000414978 IGHV3-30-3P0DP02 117 aa1.52□□□□□ -2.17
MCF2-204ENST00000414978 GZMBP10144 247 aa1.52□□□□□ -2.17
MCF2-204ENST00000414978 FABP2P12104 132 aa1.52□□□□□ -2.17
MCF2-204ENST00000414978 SNRPD3P62318 126 aaKnown RBP1.52□□□□□ -2.17
MCF2-204ENST00000414978 HIST1H1AQ02539 215 aaPredicted RBP1.52□□□□□ -2.17
MCF2-204ENST00000414978 SOSTDC1Q6X4U4 206 aa1.52□□□□□ -2.17
MCF2-204ENST00000414978 KTN1-AS1Q86SY8 53 aa1.52□□□□□ -2.17
MCF2-204ENST00000414978 OR8A1Q8NGG7 326 aa1.52□□□□□ -2.17
MCF2-204ENST00000414978 AGPAT4-IT1Q9H0P7 198 aa1.52□□□□□ -2.17
MCF2-204ENST00000414978 R4GN34 69 aa1.52□□□□□ -2.17
MCF2-204ENST00000414978 HMCN2Q8NDA2 5059 aa1.52□□□□□ -2.17
MCF2-204ENST00000414978 TMSB15BA0A087X1C1 80 aa1.51□□□□□ -2.17
MCF2-204ENST00000414978 A0A1B0GUT8 65 aa1.51□□□□□ -2.17
MCF2-204ENST00000414978 C2orf70A6NJV1 201 aa1.51□□□□□ -2.17
MCF2-204ENST00000414978 RTL8CO15255 209 aa1.51□□□□□ -2.17
MCF2-204ENST00000414978 ZNF705BP0CI00 300 aaPredicted RBP1.51□□□□□ -2.17
MCF2-204ENST00000414978 DNAH10OSP0CZ25 163 aa1.51□□□□□ -2.17
MCF2-204ENST00000414978 CRYGAP11844 174 aa1.51□□□□□ -2.17
MCF2-204ENST00000414978 MT3P25713 68 aa1.51□□□□□ -2.17
MCF2-204ENST00000414978 CRIP1P50238 77 aa1.51□□□□□ -2.17
MCF2-204ENST00000414978 DEFB136Q30KP8 78 aa1.51□□□□□ -2.17
MCF2-204ENST00000414978 Q6Q795 121 aa1.51□□□□□ -2.17
MCF2-204ENST00000414978 BAGE3Q86Y29 109 aa1.51□□□□□ -2.17
MCF2-204ENST00000414978 SPANXA2-OT1Q8N9U9 137 aa1.51□□□□□ -2.17
MCF2-204ENST00000414978 DYNLRB2Q8TF09 96 aa1.51□□□□□ -2.17
MCF2-204ENST00000414978 AP1S3Q96PC3 154 aa1.51□□□□□ -2.17
MCF2-204ENST00000414978 PRR34Q9NV39 138 aa1.51□□□□□ -2.17
MCF2-204ENST00000414978 LENEPQ9Y5L5 61 aa1.51□□□□□ -2.17
MCF2-204ENST00000414978 A0A0J9YX75 114 aa1.51□□□□□ -2.17
MCF2-204ENST00000414978 GRIFINA4D1Z8 144 aa1.51□□□□□ -2.17
MCF2-204ENST00000414978 LY6G6CO95867 125 aa1.51□□□□□ -2.17
MCF2-204ENST00000414978 FABP4P15090 132 aa1.51□□□□□ -2.17
MCF2-204ENST00000414978 PSMG4Q5JS54 123 aa1.51□□□□□ -2.17
MCF2-204ENST00000414978 HIST3H2BBQ8N257 126 aa1.51□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms