RNA–Protein interactions for RNA: ENST00000412342.5

HDAC8-210, Transcript of histone deacetylase 8, humanhuman

TSL 1 (best)

Gene HDAC8, Length 679 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-210ENST00000412342 TLX1NBP0CAT3 122 aa8.31□□□□□ -1.08
HDAC8-210ENST00000412342 MAJINQ3KP22 176 aa8.31□□□□□ -1.08
HDAC8-210ENST00000412342 TRBV30A0A0K0K1B3 111 aa8.3□□□□□ -1.08
HDAC8-210ENST00000412342 HIST1H2BKO60814 126 aa8.3□□□□□ -1.08
HDAC8-210ENST00000412342 HIST1H2BJP06899 126 aa8.3□□□□□ -1.08
HDAC8-210ENST00000412342 ZNF22P17026 224 aaPredicted RBP8.3□□□□□ -1.08
HDAC8-210ENST00000412342 HIST1H2BOP23527 126 aa8.3□□□□□ -1.08
HDAC8-210ENST00000412342 HIST1H2BBP33778 126 aa8.3□□□□□ -1.08
HDAC8-210ENST00000412342 NDUFA6P56556 154 aa8.3□□□□□ -1.08
HDAC8-210ENST00000412342 HIST1H2BDP58876 126 aa8.3□□□□□ -1.08
HDAC8-210ENST00000412342 HIST1H2BCP62807 126 aa8.3□□□□□ -1.08
HDAC8-210ENST00000412342 HIST2H2BEQ16778 126 aa8.3□□□□□ -1.08
HDAC8-210ENST00000412342 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.3□□□□□ -1.08
HDAC8-210ENST00000412342 HIST1H2BHQ93079 126 aa8.3□□□□□ -1.08
HDAC8-210ENST00000412342 IFI27L1Q96BM0 104 aa8.3□□□□□ -1.08
HDAC8-210ENST00000412342 PACRGQ96M98 296 aaPredicted RBP8.3□□□□□ -1.08
HDAC8-210ENST00000412342 HIST1H2BNQ99877 126 aa8.3□□□□□ -1.08
HDAC8-210ENST00000412342 HIST1H2BMQ99879 126 aa8.3□□□□□ -1.08
HDAC8-210ENST00000412342 TOMM7Q9P0U1 55 aa8.3□□□□□ -1.08
HDAC8-210ENST00000412342 TRAV12-1A0A0B4J245 112 aa8.29□□□□□ -1.08
HDAC8-210ENST00000412342 C11orf86A6NJI1 115 aa8.29□□□□□ -1.08
HDAC8-210ENST00000412342 SPINK8P0C7L1 97 aa8.29□□□□□ -1.08
HDAC8-210ENST00000412342 GAGE2BQ13066 116 aa8.29□□□□□ -1.08
HDAC8-210ENST00000412342 STPG4Q8N801 248 aa8.29□□□□□ -1.08
HDAC8-210ENST00000412342 LINC00474Q9P2X8 69 aa8.29□□□□□ -1.08
HDAC8-210ENST00000412342 MYCBP2O75592 4640 aa8.28□□□□□ -1.08
HDAC8-210ENST00000412342 IGLV5-39A0A0G2JS06 123 aa8.28□□□□□ -1.08
HDAC8-210ENST00000412342 ATP6V1G1O75348 118 aa8.28□□□□□ -1.08
HDAC8-210ENST00000412342 Q6ZRP5 223 aa8.28□□□□□ -1.08
HDAC8-210ENST00000412342 PLA2G1BP04054 148 aaKnown RBP8.27□□□□□ -1.09
HDAC8-210ENST00000412342 PRSS2P07478 247 aa8.27□□□□□ -1.09
HDAC8-210ENST00000412342 RPL18AQ02543 176 aaKnown RBP8.27□□□□□ -1.09
HDAC8-210ENST00000412342 C9orf116Q5BN46 136 aaPredicted RBP8.27□□□□□ -1.09
HDAC8-210ENST00000412342 C6orf226Q5I0X4 101 aa8.27□□□□□ -1.09
HDAC8-210ENST00000412342 COX7B2Q8TF08 81 aa8.27□□□□□ -1.09
HDAC8-210ENST00000412342 CHTOPQ9Y3Y2 248 aaKnown RBP8.27□□□□□ -1.09
HDAC8-210ENST00000412342 A0A1W2PNN7 141 aa8.26□□□□□ -1.09
HDAC8-210ENST00000412342 H3BRM9 83 aa8.26□□□□□ -1.09
HDAC8-210ENST00000412342 LEPROTL1O95214 131 aa8.26□□□□□ -1.09
HDAC8-210ENST00000412342 S100A1P23297 94 aa8.26□□□□□ -1.09
HDAC8-210ENST00000412342 CXCL5P42830 114 aa8.26□□□□□ -1.09
HDAC8-210ENST00000412342 CKS1BP61024 79 aa8.26□□□□□ -1.09
HDAC8-210ENST00000412342 DPH3Q96FX2 82 aa8.26□□□□□ -1.09
HDAC8-210ENST00000412342 FAT3Q8TDW7 4589 aa8.26□□□□□ -1.09
HDAC8-210ENST00000412342 F8VRH5 84 aa8.25□□□□□ -1.09
HDAC8-210ENST00000412342 INAFM2P0DMQ5 153 aa8.25□□□□□ -1.09
HDAC8-210ENST00000412342 ODF1Q14990 250 aa8.25□□□□□ -1.09
HDAC8-210ENST00000412342 NDUFC2-KCTD14E9PQ53 114 aa8.24□□□□□ -1.09
HDAC8-210ENST00000412342 RPL37AP61513 92 aaKnown RBP8.24□□□□□ -1.09
HDAC8-210ENST00000412342 LRP1Q07954 4544 aaKnown RBP8.23□□□□□ -1.09
HDAC8-210ENST00000412342 COA6Q5JTJ3 125 aaKnown RBP8.23□□□□□ -1.09
HDAC8-210ENST00000412342 KRTAP7-1Q8IUC3 87 aa8.23□□□□□ -1.09
HDAC8-210ENST00000412342 TMEM223A0PJW6 202 aa8.22□□□□□ -1.09
HDAC8-210ENST00000412342 FAM168BA1KXE4 195 aa8.22□□□□□ -1.09
HDAC8-210ENST00000412342 FABP4P15090 132 aa8.22□□□□□ -1.09
HDAC8-210ENST00000412342 HNRNPA3P51991 378 aaKnown RBP8.22□□□□□ -1.09
HDAC8-210ENST00000412342 GAGE2EQ4V326 116 aa8.22□□□□□ -1.09
HDAC8-210ENST00000412342 C9orf129Q5T035 196 aaKnown RBP8.22□□□□□ -1.09
HDAC8-210ENST00000412342 TMEM170BQ5T4T1 132 aa8.22□□□□□ -1.09
HDAC8-210ENST00000412342 GAGE2DQ9UEU5 116 aa8.22□□□□□ -1.09
HDAC8-210ENST00000412342 HSPB8Q9UJY1 196 aa8.22□□□□□ -1.09
HDAC8-210ENST00000412342 FLG2Q5D862 2391 aaPredicted RBP8.22□□□□□ -1.09
HDAC8-210ENST00000412342 C7orf33Q8WU49 177 aa8.2□□□□□ -1.1
HDAC8-210ENST00000412342 H0Y8G0 127 aa8.19□□□□□ -1.1
HDAC8-210ENST00000412342 PRR3P79522 188 aaKnown RBP8.18□□□□□ -1.1
HDAC8-210ENST00000412342 PHF5AQ7RTV0 110 aaKnown RBP8.18□□□□□ -1.1
HDAC8-210ENST00000412342 ZNF625Q96I27 306 aaPredicted RBP8.18□□□□□ -1.1
HDAC8-210ENST00000412342 XAGE1AQ9HD64 81 aa8.17□□□□□ -1.1
HDAC8-210ENST00000412342 SERTAD4-AS1Q5TG53 156 aa8.16□□□□□ -1.1
HDAC8-210ENST00000412342 FAM19A5Q7Z5A7 132 aaPredicted RBP8.16□□□□□ -1.1
HDAC8-210ENST00000412342 KRTAP11-1Q8IUC1 163 aa8.16□□□□□ -1.1
HDAC8-210ENST00000412342 PMCHL2Q9BQD1 86 aa8.16□□□□□ -1.1
HDAC8-210ENST00000412342 MAP1LC3CQ9BXW4 147 aa8.16□□□□□ -1.1
HDAC8-210ENST00000412342 SYS1-DBNDD2H3BUS1 97 aa8.15□□□□□ -1.1
HDAC8-210ENST00000412342 DPM2O94777 84 aa8.15□□□□□ -1.1
HDAC8-210ENST00000412342 PLNP26678 52 aa8.15□□□□□ -1.1
HDAC8-210ENST00000412342 TSPEAR-AS2P59090 65 aa8.14□□□□□ -1.11
HDAC8-210ENST00000412342 SFTA2Q6UW10 78 aa8.14□□□□□ -1.11
HDAC8-210ENST00000412342 ERG28Q9UKR5 140 aa8.14□□□□□ -1.11
HDAC8-210ENST00000412342 M0QXV9 152 aa8.13□□□□□ -1.11
HDAC8-210ENST00000412342 IGKCP01834 107 aa8.13□□□□□ -1.11
HDAC8-210ENST00000412342 PSORS1C2Q9UIG4 136 aa8.13□□□□□ -1.11
HDAC8-210ENST00000412342 PFN2P35080 140 aa8.12□□□□□ -1.11
HDAC8-210ENST00000412342 COX17Q14061 63 aa8.12□□□□□ -1.11
HDAC8-210ENST00000412342 LINC01545Q5VT33 79 aa8.12□□□□□ -1.11
HDAC8-210ENST00000412342 PLA2G2DQ9UNK4 145 aa8.12□□□□□ -1.11
HDAC8-210ENST00000412342 HERC1Q15751 4861 aa8.12□□□□□ -1.11
HDAC8-210ENST00000412342 LEPROTO15243 131 aa8.11□□□□□ -1.11
HDAC8-210ENST00000412342 C3orf79P0CE67 100 aa8.11□□□□□ -1.11
HDAC8-210ENST00000412342 PET117Q6UWS5 81 aa8.11□□□□□ -1.11
HDAC8-210ENST00000412342 C22orf24Q9Y442 160 aa8.11□□□□□ -1.11
HDAC8-210ENST00000412342 IGLV5-37A0A075B6J1 123 aa8.1□□□□□ -1.11
HDAC8-210ENST00000412342 KRTAP29-1A8MX34 341 aaPredicted RBP8.1□□□□□ -1.11
HDAC8-210ENST00000412342 SRSF9Q13242 221 aaKnown RBP eCLIP8.1□□□□□ -1.11
HDAC8-210ENST00000412342 SND1-IT1Q9HBX3 110 aa8.1□□□□□ -1.11
HDAC8-210ENST00000412342 TP73-AS1Q9UF72 201 aa8.1□□□□□ -1.11
HDAC8-210ENST00000412342 PLEKHB2Q96CS7 222 aa8.09□□□□□ -1.11
HDAC8-210ENST00000412342 NDUFA12Q9UI09 145 aa8.09□□□□□ -1.11
HDAC8-210ENST00000412342 J3QQQ9 107 aa8.08□□□□□ -1.12
HDAC8-210ENST00000412342 HERVK_113P61574 105 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms