RNA–Protein interactions for RNA: ENST00000411706.1

KLF4-202, Transcript of Kruppel like factor 4, humanhuman

TSL 1 (best)

Gene KLF4, Length 800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLF4-202ENST00000411706 C10orf25Q5T742 122 aa12.13□□□□□ -0.47
KLF4-202ENST00000411706 C6orf48Q9UBA6 75 aa12.13□□□□□ -0.47
KLF4-202ENST00000411706 H3BRM9 83 aa12.12□□□□□ -0.47
KLF4-202ENST00000411706 HSBP1O75506 76 aa12.12□□□□□ -0.47
KLF4-202ENST00000411706 VPS13BQ7Z7G8 4022 aa12.12□□□□□ -0.47
KLF4-202ENST00000411706 SRRM2Q9UQ35 2752 aaKnown RBP12.11□□□□□ -0.47
KLF4-202ENST00000411706 IGLC3P0DOY3 106 aa12.11□□□□□ -0.47
KLF4-202ENST00000411706 CXCL5P42830 114 aa12.11□□□□□ -0.47
KLF4-202ENST00000411706 C2orf82Q6UX34 121 aa12.11□□□□□ -0.47
KLF4-202ENST00000411706 SMIM1B2RUZ4 78 aa12.1□□□□□ -0.47
KLF4-202ENST00000411706 KRTAP10-4P60372 401 aaPredicted RBP12.09□□□□□ -0.47
KLF4-202ENST00000411706 IFI27L1Q96BM0 104 aa12.08□□□□□ -0.48
KLF4-202ENST00000411706 NDUFC2-KCTD14E9PQ53 114 aa12.07□□□□□ -0.48
KLF4-202ENST00000411706 F8VRH5 84 aa12.07□□□□□ -0.48
KLF4-202ENST00000411706 Q6ZRP5 223 aa12.07□□□□□ -0.48
KLF4-202ENST00000411706 COX7B2Q8TF08 81 aa12.07□□□□□ -0.48
KLF4-202ENST00000411706 SPINK8P0C7L1 97 aa12.06□□□□□ -0.48
KLF4-202ENST00000411706 C9orf116Q5BN46 136 aaPredicted RBP12.06□□□□□ -0.48
KLF4-202ENST00000411706 TRAV12-1A0A0B4J245 112 aa12.05□□□□□ -0.48
KLF4-202ENST00000411706 GAGE2EQ4V326 116 aa12.05□□□□□ -0.48
KLF4-202ENST00000411706 GAGE2DQ9UEU5 116 aa12.05□□□□□ -0.48
KLF4-202ENST00000411706 CHTOPQ9Y3Y2 248 aaKnown RBP12.05□□□□□ -0.48
KLF4-202ENST00000411706 SERF1AO75920 110 aa12.04□□□□□ -0.48
KLF4-202ENST00000411706 FAM19A2Q8N3H0 131 aa12.04□□□□□ -0.48
KLF4-202ENST00000411706 FLG2Q5D862 2391 aaPredicted RBP12.04□□□□□ -0.48
KLF4-202ENST00000411706 A0A1W2PNN7 141 aa12.03□□□□□ -0.48
KLF4-202ENST00000411706 SCO1O75880 301 aa12.03□□□□□ -0.48
KLF4-202ENST00000411706 ZNF22P17026 224 aaPredicted RBP12.03□□□□□ -0.48
KLF4-202ENST00000411706 LEPROTL1O95214 131 aa12.02□□□□□ -0.49
KLF4-202ENST00000411706 C11orf86A6NJI1 115 aa12.01□□□□□ -0.49
KLF4-202ENST00000411706 TMEM170BQ5T4T1 132 aa12.01□□□□□ -0.49
KLF4-202ENST00000411706 IGLV5-39A0A0G2JS06 123 aa12□□□□□ -0.49
KLF4-202ENST00000411706 LINC00310P59036 64 aa11.99□□□□□ -0.49
KLF4-202ENST00000411706 HSPB8Q9UJY1 196 aa11.99□□□□□ -0.49
KLF4-202ENST00000411706 SFTA2Q6UW10 78 aa11.98□□□□□ -0.49
KLF4-202ENST00000411706 PRR3P79522 188 aaKnown RBP11.97□□□□□ -0.49
KLF4-202ENST00000411706 FAM168BA1KXE4 195 aa11.95□□□□□ -0.5
KLF4-202ENST00000411706 NUPR1O60356 82 aa11.95□□□□□ -0.5
KLF4-202ENST00000411706 HIST1H2BKO60814 126 aa11.95□□□□□ -0.5
KLF4-202ENST00000411706 HIST1H2BJP06899 126 aa11.95□□□□□ -0.5
KLF4-202ENST00000411706 HIST1H2BOP23527 126 aa11.95□□□□□ -0.5
KLF4-202ENST00000411706 HIST1H2BBP33778 126 aa11.95□□□□□ -0.5
KLF4-202ENST00000411706 HIST1H2BDP58876 126 aa11.95□□□□□ -0.5
KLF4-202ENST00000411706 HIST1H2BCP62807 126 aa11.95□□□□□ -0.5
KLF4-202ENST00000411706 HIST2H2BEQ16778 126 aa11.95□□□□□ -0.5
KLF4-202ENST00000411706 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.95□□□□□ -0.5
KLF4-202ENST00000411706 C9orf129Q5T035 196 aaKnown RBP11.95□□□□□ -0.5
KLF4-202ENST00000411706 FAM19A5Q7Z5A7 132 aaPredicted RBP11.95□□□□□ -0.5
KLF4-202ENST00000411706 HIST1H2BHQ93079 126 aa11.95□□□□□ -0.5
KLF4-202ENST00000411706 HIST1H2BNQ99877 126 aa11.95□□□□□ -0.5
KLF4-202ENST00000411706 HIST1H2BMQ99879 126 aa11.95□□□□□ -0.5
KLF4-202ENST00000411706 KRTAP29-1A8MX34 341 aaPredicted RBP11.94□□□□□ -0.5
KLF4-202ENST00000411706 HNRNPA3P51991 378 aaKnown RBP11.94□□□□□ -0.5
KLF4-202ENST00000411706 PHF5AQ7RTV0 110 aaKnown RBP11.94□□□□□ -0.5
KLF4-202ENST00000411706 TMEM223A0PJW6 202 aa11.93□□□□□ -0.5
KLF4-202ENST00000411706 H0Y8G0 127 aa11.93□□□□□ -0.5
KLF4-202ENST00000411706 OXTP01178 125 aa11.93□□□□□ -0.5
KLF4-202ENST00000411706 FABP4P15090 132 aa11.93□□□□□ -0.5
KLF4-202ENST00000411706 S100A1P23297 94 aa11.93□□□□□ -0.5
KLF4-202ENST00000411706 J3QL48 77 aa11.92□□□□□ -0.5
KLF4-202ENST00000411706 ODF1Q14990 250 aa11.92□□□□□ -0.5
KLF4-202ENST00000411706 XAGE1AQ9HD64 81 aa11.92□□□□□ -0.5
KLF4-202ENST00000411706 M0QXV9 152 aa11.91□□□□□ -0.5
KLF4-202ENST00000411706 COX17Q14061 63 aa11.91□□□□□ -0.5
KLF4-202ENST00000411706 PLNP26678 52 aa11.9□□□□□ -0.5
KLF4-202ENST00000411706 MAP1LC3CQ9BXW4 147 aa11.9□□□□□ -0.5
KLF4-202ENST00000411706 KRTAP7-1Q8IUC3 87 aa11.89□□□□□ -0.51
KLF4-202ENST00000411706 PSORS1C2Q9UIG4 136 aa11.89□□□□□ -0.51
KLF4-202ENST00000411706 UBE2BP63146 152 aa11.88□□□□□ -0.51
KLF4-202ENST00000411706 SPINK6Q6UWN8 80 aa11.88□□□□□ -0.51
KLF4-202ENST00000411706 ERG28Q9UKR5 140 aa11.88□□□□□ -0.51
KLF4-202ENST00000411706 MYCBP2O75592 4640 aa11.88□□□□□ -0.51
KLF4-202ENST00000411706 DMBT1Q9UGM3 2413 aaPredicted RBP11.88□□□□□ -0.51
KLF4-202ENST00000411706 PFN2P35080 140 aa11.87□□□□□ -0.51
KLF4-202ENST00000411706 LBHQ53QV2 105 aaPredicted RBP11.87□□□□□ -0.51
KLF4-202ENST00000411706 PLA2G2DQ9UNK4 145 aa11.87□□□□□ -0.51
KLF4-202ENST00000411706 C1orf137Q5JT78 98 aa11.86□□□□□ -0.51
KLF4-202ENST00000411706 ZNF625Q96I27 306 aaPredicted RBP11.86□□□□□ -0.51
KLF4-202ENST00000411706 TP73-AS1Q9UF72 201 aa11.86□□□□□ -0.51
KLF4-202ENST00000411706 C22orf24Q9Y442 160 aa11.86□□□□□ -0.51
KLF4-202ENST00000411706 DPM2O94777 84 aa11.85□□□□□ -0.51
KLF4-202ENST00000411706 SERTAD4-AS1Q5TG53 156 aa11.85□□□□□ -0.51
KLF4-202ENST00000411706 SRSF9Q13242 221 aaKnown RBP eCLIP11.84□□□□□ -0.51
KLF4-202ENST00000411706 PKHD1L1Q86WI1 4243 aa11.84□□□□□ -0.51
KLF4-202ENST00000411706 IGKCP01834 107 aa11.83□□□□□ -0.52
KLF4-202ENST00000411706 HERVK_113P61574 105 aa11.83□□□□□ -0.52
KLF4-202ENST00000411706 HERV-K104P63124 156 aa11.83□□□□□ -0.52
KLF4-202ENST00000411706 COA6Q5JTJ3 125 aaKnown RBP11.83□□□□□ -0.52
KLF4-202ENST00000411706 LINC00587B1AMM8 73 aa11.82□□□□□ -0.52
KLF4-202ENST00000411706 MRPL55Q7Z7F7 128 aaKnown RBP11.82□□□□□ -0.52
KLF4-202ENST00000411706 ATP6V1G1O75348 118 aa11.81□□□□□ -0.52
KLF4-202ENST00000411706 PLEKHB2Q96CS7 222 aa11.81□□□□□ -0.52
KLF4-202ENST00000411706 IGLV5-37A0A075B6J1 123 aa11.8□□□□□ -0.52
KLF4-202ENST00000411706 MYMXA0A1B0GTQ4 84 aa11.8□□□□□ -0.52
KLF4-202ENST00000411706 SYS1-DBNDD2H3BUS1 97 aa11.8□□□□□ -0.52
KLF4-202ENST00000411706 LEPROTO15243 131 aa11.8□□□□□ -0.52
KLF4-202ENST00000411706 IGLV7-43P04211 117 aa11.8□□□□□ -0.52
KLF4-202ENST00000411706 REG3GQ6UW15 175 aa11.8□□□□□ -0.52
KLF4-202ENST00000411706 NKAPP1Q8N9T2 125 aa11.8□□□□□ -0.52
KLF4-202ENST00000411706 PMCHL2Q9BQD1 86 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 320.3 ms