RNA–Protein interactions for RNA: ENST00000409810.6

CHMP3-205, Transcript of charged multivesicular body protein 3, humanhuman

TSL 5

Gene CHMP3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-205ENST00000409810 IFI27L1Q96BM0 104 aa6.93□□□□□ -1.3
CHMP3-205ENST00000409810 SMIM1B2RUZ4 78 aa6.92□□□□□ -1.3
CHMP3-205ENST00000409810 SERF1AO75920 110 aa6.92□□□□□ -1.3
CHMP3-205ENST00000409810 TLX1NBP0CAT3 122 aa6.92□□□□□ -1.3
CHMP3-205ENST00000409810 C7orf33Q8WU49 177 aa6.92□□□□□ -1.3
CHMP3-205ENST00000409810 C6orf48Q9UBA6 75 aa6.92□□□□□ -1.3
CHMP3-205ENST00000409810 TRAV12-1A0A0B4J245 112 aa6.91□□□□□ -1.3
CHMP3-205ENST00000409810 SPINK8P0C7L1 97 aa6.91□□□□□ -1.3
CHMP3-205ENST00000409810 RPL37AP61513 92 aaKnown RBP6.91□□□□□ -1.3
CHMP3-205ENST00000409810 C10orf25Q5T742 122 aa6.91□□□□□ -1.3
CHMP3-205ENST00000409810 C2orf82Q6UX34 121 aa6.91□□□□□ -1.3
CHMP3-205ENST00000409810 FAM19A2Q8N3H0 131 aa6.91□□□□□ -1.3
CHMP3-205ENST00000409810 COX7B2Q8TF08 81 aa6.91□□□□□ -1.3
CHMP3-205ENST00000409810 CHTOPQ9Y3Y2 248 aaKnown RBP6.91□□□□□ -1.3
CHMP3-205ENST00000409810 LEPROTL1O95214 131 aa6.9□□□□□ -1.3
CHMP3-205ENST00000409810 INAFM2P0DMQ5 153 aa6.9□□□□□ -1.3
CHMP3-205ENST00000409810 S100A1P23297 94 aa6.9□□□□□ -1.3
CHMP3-205ENST00000409810 NDUFC2-KCTD14E9PQ53 114 aa6.89□□□□□ -1.31
CHMP3-205ENST00000409810 F8VRH5 84 aa6.89□□□□□ -1.31
CHMP3-205ENST00000409810 ZNF22P17026 224 aaPredicted RBP6.89□□□□□ -1.31
CHMP3-205ENST00000409810 TMEM170BQ5T4T1 132 aa6.89□□□□□ -1.31
CHMP3-205ENST00000409810 HSPB8Q9UJY1 196 aa6.89□□□□□ -1.31
CHMP3-205ENST00000409810 C11orf86A6NJI1 115 aa6.88□□□□□ -1.31
CHMP3-205ENST00000409810 LINC00310P59036 64 aa6.88□□□□□ -1.31
CHMP3-205ENST00000409810 Q6ZRP5 223 aa6.88□□□□□ -1.31
CHMP3-205ENST00000409810 ABCA13Q86UQ4 5058 aa6.88□□□□□ -1.31
CHMP3-205ENST00000409810 HIST1H2BKO60814 126 aa6.87□□□□□ -1.31
CHMP3-205ENST00000409810 HIST1H2BJP06899 126 aa6.87□□□□□ -1.31
CHMP3-205ENST00000409810 HIST1H2BOP23527 126 aa6.87□□□□□ -1.31
CHMP3-205ENST00000409810 HIST1H2BBP33778 126 aa6.87□□□□□ -1.31
CHMP3-205ENST00000409810 HIST1H2BDP58876 126 aa6.87□□□□□ -1.31
CHMP3-205ENST00000409810 HIST1H2BCP62807 126 aa6.87□□□□□ -1.31
CHMP3-205ENST00000409810 HIST2H2BEQ16778 126 aa6.87□□□□□ -1.31
CHMP3-205ENST00000409810 GAGE2EQ4V326 116 aa6.87□□□□□ -1.31
CHMP3-205ENST00000409810 C9orf116Q5BN46 136 aaPredicted RBP6.87□□□□□ -1.31
CHMP3-205ENST00000409810 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.87□□□□□ -1.31
CHMP3-205ENST00000409810 SFTA2Q6UW10 78 aa6.87□□□□□ -1.31
CHMP3-205ENST00000409810 HIST1H2BHQ93079 126 aa6.87□□□□□ -1.31
CHMP3-205ENST00000409810 HIST1H2BNQ99877 126 aa6.87□□□□□ -1.31
CHMP3-205ENST00000409810 HIST1H2BMQ99879 126 aa6.87□□□□□ -1.31
CHMP3-205ENST00000409810 GAGE2DQ9UEU5 116 aa6.87□□□□□ -1.31
CHMP3-205ENST00000409810 IGLV5-39A0A0G2JS06 123 aa6.86□□□□□ -1.31
CHMP3-205ENST00000409810 H0Y8G0 127 aa6.86□□□□□ -1.31
CHMP3-205ENST00000409810 SRRM2Q9UQ35 2752 aaKnown RBP6.86□□□□□ -1.31
CHMP3-205ENST00000409810 FLG2Q5D862 2391 aaPredicted RBP6.85□□□□□ -1.31
CHMP3-205ENST00000409810 ATP6V1G1O75348 118 aa6.85□□□□□ -1.31
CHMP3-205ENST00000409810 FABP4P15090 132 aa6.85□□□□□ -1.31
CHMP3-205ENST00000409810 PCLOQ9Y6V0 5065 aa6.85□□□□□ -1.31
CHMP3-205ENST00000409810 A0A1W2PNN7 141 aa6.84□□□□□ -1.31
CHMP3-205ENST00000409810 TMEM223A0PJW6 202 aa6.84□□□□□ -1.31
CHMP3-205ENST00000409810 NUPR1O60356 82 aa6.84□□□□□ -1.31
CHMP3-205ENST00000409810 ODF1Q14990 250 aa6.84□□□□□ -1.31
CHMP3-205ENST00000409810 MAP1LC3CQ9BXW4 147 aa6.84□□□□□ -1.31
CHMP3-205ENST00000409810 PLNP26678 52 aa6.83□□□□□ -1.32
CHMP3-205ENST00000409810 KRTAP10-4P60372 401 aaPredicted RBP6.83□□□□□ -1.32
CHMP3-205ENST00000409810 PKHD1L1Q86WI1 4243 aa6.82□□□□□ -1.32
CHMP3-205ENST00000409810 FAM19A5Q7Z5A7 132 aaPredicted RBP6.82□□□□□ -1.32
CHMP3-205ENST00000409810 M0QXV9 152 aa6.81□□□□□ -1.32
CHMP3-205ENST00000409810 DPM2O94777 84 aa6.81□□□□□ -1.32
CHMP3-205ENST00000409810 HERVK_113P61574 105 aa6.81□□□□□ -1.32
CHMP3-205ENST00000409810 PRR3P79522 188 aaKnown RBP6.81□□□□□ -1.32
CHMP3-205ENST00000409810 COX17Q14061 63 aa6.81□□□□□ -1.32
CHMP3-205ENST00000409810 C9orf129Q5T035 196 aaKnown RBP6.81□□□□□ -1.32
CHMP3-205ENST00000409810 FAM168BA1KXE4 195 aa6.8□□□□□ -1.32
CHMP3-205ENST00000409810 IGKCP01834 107 aa6.8□□□□□ -1.32
CHMP3-205ENST00000409810 COA6Q5JTJ3 125 aaKnown RBP6.8□□□□□ -1.32
CHMP3-205ENST00000409810 PHF5AQ7RTV0 110 aaKnown RBP6.8□□□□□ -1.32
CHMP3-205ENST00000409810 XAGE1AQ9HD64 81 aa6.8□□□□□ -1.32
CHMP3-205ENST00000409810 ERG28Q9UKR5 140 aa6.8□□□□□ -1.32
CHMP3-205ENST00000409810 MYCBP2O75592 4640 aa6.78□□□□□ -1.32
CHMP3-205ENST00000409810 SYS1-DBNDD2H3BUS1 97 aa6.78□□□□□ -1.32
CHMP3-205ENST00000409810 PFN2P35080 140 aa6.78□□□□□ -1.32
CHMP3-205ENST00000409810 UBE2BP63146 152 aa6.78□□□□□ -1.32
CHMP3-205ENST00000409810 PLEKHB2Q96CS7 222 aa6.78□□□□□ -1.32
CHMP3-205ENST00000409810 ZNF625Q96I27 306 aaPredicted RBP6.78□□□□□ -1.32
CHMP3-205ENST00000409810 LINC00587B1AMM8 73 aa6.77□□□□□ -1.33
CHMP3-205ENST00000409810 LEPROTO15243 131 aa6.77□□□□□ -1.33
CHMP3-205ENST00000409810 HERV-K104P63124 156 aa6.77□□□□□ -1.33
CHMP3-205ENST00000409810 LBHQ53QV2 105 aaPredicted RBP6.77□□□□□ -1.33
CHMP3-205ENST00000409810 PMCHL2Q9BQD1 86 aa6.77□□□□□ -1.33
CHMP3-205ENST00000409810 TP73-AS1Q9UF72 201 aa6.77□□□□□ -1.33
CHMP3-205ENST00000409810 PLA2G2DQ9UNK4 145 aa6.77□□□□□ -1.33
CHMP3-205ENST00000409810 MYMXA0A1B0GTQ4 84 aa6.76□□□□□ -1.33
CHMP3-205ENST00000409810 HNRNPA3P51991 378 aaKnown RBP6.76□□□□□ -1.33
CHMP3-205ENST00000409810 MEIG1Q5JSS6 88 aa6.76□□□□□ -1.33
CHMP3-205ENST00000409810 C1orf137Q5JT78 98 aa6.76□□□□□ -1.33
CHMP3-205ENST00000409810 SERTAD4-AS1Q5TG53 156 aa6.76□□□□□ -1.33
CHMP3-205ENST00000409810 PET117Q6UWS5 81 aa6.76□□□□□ -1.33
CHMP3-205ENST00000409810 NDUFA12Q9UI09 145 aa6.76□□□□□ -1.33
CHMP3-205ENST00000409810 PSORS1C2Q9UIG4 136 aa6.76□□□□□ -1.33
CHMP3-205ENST00000409810 KRTAP29-1A8MX34 341 aaPredicted RBP6.75□□□□□ -1.33
CHMP3-205ENST00000409810 J3QL48 77 aa6.75□□□□□ -1.33
CHMP3-205ENST00000409810 OXTP01178 125 aa6.75□□□□□ -1.33
CHMP3-205ENST00000409810 LGALS3P17931 250 aaKnown RBP6.75□□□□□ -1.33
CHMP3-205ENST00000409810 LINC00158P58513 81 aa6.75□□□□□ -1.33
CHMP3-205ENST00000409810 SPINK6Q6UWN8 80 aa6.75□□□□□ -1.33
CHMP3-205ENST00000409810 MRPL55Q7Z7F7 128 aaKnown RBP6.75□□□□□ -1.33
CHMP3-205ENST00000409810 KRTAP7-1Q8IUC3 87 aa6.75□□□□□ -1.33
CHMP3-205ENST00000409810 NKAPP1Q8N9T2 125 aa6.75□□□□□ -1.33
CHMP3-205ENST00000409810 C22orf24Q9Y442 160 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 96.7 ms