RNA–Protein interactions for RNA: ENST00000409783.6

PTCD3-203, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-203ENST00000409783 IGKV2-24A0A0C4DH68 120 aa14.18□□□□□ -0.14
PTCD3-203ENST00000409783 LOC107984640A0A0U1RRK4 108 aa14.18□□□□□ -0.14
PTCD3-203ENST00000409783 EPM2AB3EWF7 344 aa14.18□□□□□ -0.14
PTCD3-203ENST00000409783 PACRGQ96M98 296 aaPredicted RBP14.18□□□□□ -0.14
PTCD3-203ENST00000409783 PKIGQ9Y2B9 76 aa14.18□□□□□ -0.14
PTCD3-203ENST00000409783 LINC00528Q8N1L1 170 aa14.17□□□□□ -0.14
PTCD3-203ENST00000409783 TOMM7Q9P0U1 55 aa14.17□□□□□ -0.14
PTCD3-203ENST00000409783 TRAV12-1A0A0B4J245 112 aa14.16□□□□□ -0.14
PTCD3-203ENST00000409783 ZNF22P17026 224 aaPredicted RBP14.16□□□□□ -0.14
PTCD3-203ENST00000409783 PTTG1IPP53801 180 aa14.16□□□□□ -0.14
PTCD3-203ENST00000409783 MAJINQ3KP22 176 aa14.16□□□□□ -0.14
PTCD3-203ENST00000409783 PLAC8Q9NZF1 115 aa14.16□□□□□ -0.14
PTCD3-203ENST00000409783 PCLOQ9Y6V0 5065 aa14.15□□□□□ -0.14
PTCD3-203ENST00000409783 C11orf86A6NJI1 115 aa14.15□□□□□ -0.14
PTCD3-203ENST00000409783 SPINK8P0C7L1 97 aa14.15□□□□□ -0.14
PTCD3-203ENST00000409783 PRSS2P07478 247 aa14.14□□□□□ -0.15
PTCD3-203ENST00000409783 C6orf226Q5I0X4 101 aa14.14□□□□□ -0.15
PTCD3-203ENST00000409783 CHTOPQ9Y3Y2 248 aaKnown RBP14.14□□□□□ -0.15
PTCD3-203ENST00000409783 TRBV30A0A0K0K1B3 111 aa14.13□□□□□ -0.15
PTCD3-203ENST00000409783 FAM229AH3BQW9 127 aa14.13□□□□□ -0.15
PTCD3-203ENST00000409783 LEPROTL1O95214 131 aa14.13□□□□□ -0.15
PTCD3-203ENST00000409783 TLX1NBP0CAT3 122 aa14.13□□□□□ -0.15
PTCD3-203ENST00000409783 DPH3Q96FX2 82 aa14.13□□□□□ -0.15
PTCD3-203ENST00000409783 LINC00474Q9P2X8 69 aa14.13□□□□□ -0.15
PTCD3-203ENST00000409783 H3BRM9 83 aa14.12□□□□□ -0.15
PTCD3-203ENST00000409783 GAGE2BQ13066 116 aa14.12□□□□□ -0.15
PTCD3-203ENST00000409783 IGLV5-39A0A0G2JS06 123 aa14.11□□□□□ -0.15
PTCD3-203ENST00000409783 CKS1BP61024 79 aa14.11□□□□□ -0.15
PTCD3-203ENST00000409783 STPG4Q8N801 248 aa14.11□□□□□ -0.15
PTCD3-203ENST00000409783 COX7B2Q8TF08 81 aa14.11□□□□□ -0.15
PTCD3-203ENST00000409783 KRTAP10-4P60372 401 aaPredicted RBP14.1□□□□□ -0.15
PTCD3-203ENST00000409783 RPL18AQ02543 176 aaKnown RBP14.1□□□□□ -0.15
PTCD3-203ENST00000409783 C9orf116Q5BN46 136 aaPredicted RBP14.1□□□□□ -0.15
PTCD3-203ENST00000409783 Q6ZRP5 223 aa14.1□□□□□ -0.15
PTCD3-203ENST00000409783 F8VRH5 84 aa14.09□□□□□ -0.15
PTCD3-203ENST00000409783 SRRM2Q9UQ35 2752 aaKnown RBP14.08□□□□□ -0.16
PTCD3-203ENST00000409783 FABP4P15090 132 aa14.08□□□□□ -0.16
PTCD3-203ENST00000409783 CXCL5P42830 114 aa14.08□□□□□ -0.16
PTCD3-203ENST00000409783 ODF1Q14990 250 aa14.08□□□□□ -0.16
PTCD3-203ENST00000409783 COA6Q5JTJ3 125 aaKnown RBP14.07□□□□□ -0.16
PTCD3-203ENST00000409783 HSPB8Q9UJY1 196 aa14.07□□□□□ -0.16
PTCD3-203ENST00000409783 TMEM170BQ5T4T1 132 aa14.06□□□□□ -0.16
PTCD3-203ENST00000409783 A0A1W2PNN7 141 aa14.05□□□□□ -0.16
PTCD3-203ENST00000409783 NDUFC2-KCTD14E9PQ53 114 aa14.05□□□□□ -0.16
PTCD3-203ENST00000409783 PLA2G1BP04054 148 aaKnown RBP14.04□□□□□ -0.16
PTCD3-203ENST00000409783 TMEM223A0PJW6 202 aa14.03□□□□□ -0.16
PTCD3-203ENST00000409783 H0Y8G0 127 aa14.03□□□□□ -0.16
PTCD3-203ENST00000409783 GAGE2EQ4V326 116 aa14.02□□□□□ -0.17
PTCD3-203ENST00000409783 GAGE2DQ9UEU5 116 aa14.02□□□□□ -0.17
PTCD3-203ENST00000409783 RPL37AP61513 92 aaKnown RBP14□□□□□ -0.17
PTCD3-203ENST00000409783 INAFM2P0DMQ5 153 aa13.99□□□□□ -0.17
PTCD3-203ENST00000409783 C9orf129Q5T035 196 aaKnown RBP13.99□□□□□ -0.17
PTCD3-203ENST00000409783 KRTAP7-1Q8IUC3 87 aa13.99□□□□□ -0.17
PTCD3-203ENST00000409783 FAM168BA1KXE4 195 aa13.98□□□□□ -0.17
PTCD3-203ENST00000409783 MAP1LC3CQ9BXW4 147 aa13.98□□□□□ -0.17
PTCD3-203ENST00000409783 PMCHL2Q9BQD1 86 aa13.97□□□□□ -0.17
PTCD3-203ENST00000409783 ZNF625Q96I27 306 aaPredicted RBP13.96□□□□□ -0.17
PTCD3-203ENST00000409783 PKHD1L1Q86WI1 4243 aa13.95□□□□□ -0.18
PTCD3-203ENST00000409783 PLNP26678 52 aa13.95□□□□□ -0.18
PTCD3-203ENST00000409783 C7orf33Q8WU49 177 aa13.95□□□□□ -0.18
PTCD3-203ENST00000409783 SYS1-DBNDD2H3BUS1 97 aa13.94□□□□□ -0.18
PTCD3-203ENST00000409783 DPM2O94777 84 aa13.94□□□□□ -0.18
PTCD3-203ENST00000409783 XAGE1AQ9HD64 81 aa13.93□□□□□ -0.18
PTCD3-203ENST00000409783 FLG2Q5D862 2391 aaPredicted RBP13.93□□□□□ -0.18
PTCD3-203ENST00000409783 PHF5AQ7RTV0 110 aaKnown RBP13.92□□□□□ -0.18
PTCD3-203ENST00000409783 IGKCP01834 107 aa13.91□□□□□ -0.18
PTCD3-203ENST00000409783 HNRNPA3P51991 378 aaKnown RBP13.91□□□□□ -0.18
PTCD3-203ENST00000409783 FAM19A5Q7Z5A7 132 aaPredicted RBP13.91□□□□□ -0.18
PTCD3-203ENST00000409783 C3orf79P0CE67 100 aa13.89□□□□□ -0.19
PTCD3-203ENST00000409783 SERTAD4-AS1Q5TG53 156 aa13.89□□□□□ -0.19
PTCD3-203ENST00000409783 LINC01545Q5VT33 79 aa13.89□□□□□ -0.19
PTCD3-203ENST00000409783 SFTA2Q6UW10 78 aa13.89□□□□□ -0.19
PTCD3-203ENST00000409783 ERG28Q9UKR5 140 aa13.89□□□□□ -0.19
PTCD3-203ENST00000409783 PRR3P79522 188 aaKnown RBP13.88□□□□□ -0.19
PTCD3-203ENST00000409783 PET117Q6UWS5 81 aa13.88□□□□□ -0.19
PTCD3-203ENST00000409783 MYCBP2O75592 4640 aa13.88□□□□□ -0.19
PTCD3-203ENST00000409783 PFN2P35080 140 aa13.87□□□□□ -0.19
PTCD3-203ENST00000409783 TSPEAR-AS2P59090 65 aa13.87□□□□□ -0.19
PTCD3-203ENST00000409783 LEPROTO15243 131 aa13.86□□□□□ -0.19
PTCD3-203ENST00000409783 COX17Q14061 63 aa13.86□□□□□ -0.19
PTCD3-203ENST00000409783 KRTAP11-1Q8IUC1 163 aa13.86□□□□□ -0.19
PTCD3-203ENST00000409783 M0QXV9 152 aa13.85□□□□□ -0.19
PTCD3-203ENST00000409783 HIST3H2BBQ8N257 126 aa13.83□□□□□ -0.2
PTCD3-203ENST00000409783 PLEKHB2Q96CS7 222 aa13.83□□□□□ -0.2
PTCD3-203ENST00000409783 NDUFA12Q9UI09 145 aa13.83□□□□□ -0.2
PTCD3-203ENST00000409783 PLA2G2DQ9UNK4 145 aa13.83□□□□□ -0.2
PTCD3-203ENST00000409783 KRTDAPP60985 99 aa13.82□□□□□ -0.2
PTCD3-203ENST00000409783 HERVK_113P61574 105 aa13.82□□□□□ -0.2
PTCD3-203ENST00000409783 PSORS1C2Q9UIG4 136 aa13.82□□□□□ -0.2
PTCD3-203ENST00000409783 C22orf24Q9Y442 160 aa13.82□□□□□ -0.2
PTCD3-203ENST00000409783 J3QQQ9 107 aa13.81□□□□□ -0.2
PTCD3-203ENST00000409783 SND1-IT1Q9HBX3 110 aa13.81□□□□□ -0.2
PTCD3-203ENST00000409783 HERV-K104P63124 156 aa13.8□□□□□ -0.2
PTCD3-203ENST00000409783 E9PLD3 99 aa13.79□□□□□ -0.2
PTCD3-203ENST00000409783 TP73-AS1Q9UF72 201 aa13.79□□□□□ -0.2
PTCD3-203ENST00000409783 LRP1Q07954 4544 aaKnown RBP13.78□□□□□ -0.2
PTCD3-203ENST00000409783 FAT3Q8TDW7 4589 aa13.78□□□□□ -0.2
PTCD3-203ENST00000409783 IGLV5-37A0A075B6J1 123 aa13.78□□□□□ -0.2
PTCD3-203ENST00000409783 MYMXA0A1B0GTQ4 84 aa13.78□□□□□ -0.2
PTCD3-203ENST00000409783 HIST1H2BLQ99880 126 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms