RNA–Protein interactions for RNA: ENST00000409248.8

C4orf48-201, Transcript of chromosome 4 open reading frame 48, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C4orf48, Length 433 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf48-201ENST00000409248 TOMM7Q9P0U1 55 aa13.44□□□□□ -0.26
C4orf48-201ENST00000409248 F8WDY8 70 aa13.42□□□□□ -0.26
C4orf48-201ENST00000409248 HAMPP81172 84 aa13.42□□□□□ -0.26
C4orf48-201ENST00000409248 Q8IZM0 81 aa13.42□□□□□ -0.26
C4orf48-201ENST00000409248 CAMK2N2Q96S95 79 aa13.42□□□□□ -0.26
C4orf48-201ENST00000409248 SLPIP03973 132 aa13.41□□□□□ -0.26
C4orf48-201ENST00000409248 SYCNQ0VAF6 134 aa13.41□□□□□ -0.26
C4orf48-201ENST00000409248 KIAA0087Q14695 138 aa13.41□□□□□ -0.26
C4orf48-201ENST00000409248 CARD19Q96LW7 228 aa13.41□□□□□ -0.26
C4orf48-201ENST00000409248 TMEM223A0PJW6 202 aa13.4□□□□□ -0.26
C4orf48-201ENST00000409248 NDUFA1O15239 70 aa13.4□□□□□ -0.26
C4orf48-201ENST00000409248 C6orf226Q5I0X4 101 aa13.4□□□□□ -0.26
C4orf48-201ENST00000409248 COX7B2Q8TF08 81 aa13.4□□□□□ -0.26
C4orf48-201ENST00000409248 IGLV5-39A0A0G2JS06 123 aa13.39□□□□□ -0.27
C4orf48-201ENST00000409248 EPM2AB3EWF7 344 aa13.38□□□□□ -0.27
C4orf48-201ENST00000409248 CXCL5P42830 114 aa13.38□□□□□ -0.27
C4orf48-201ENST00000409248 AKR1D1P51857 326 aa13.38□□□□□ -0.27
C4orf48-201ENST00000409248 CKS1BP61024 79 aa13.38□□□□□ -0.27
C4orf48-201ENST00000409248 HERVK_113P61574 105 aa13.38□□□□□ -0.27
C4orf48-201ENST00000409248 Q6ZRU5 148 aa13.37□□□□□ -0.27
C4orf48-201ENST00000409248 SCXQ7RTU7 201 aa13.37□□□□□ -0.27
C4orf48-201ENST00000409248 KRTAP17-1Q9BYP8 105 aa13.36□□□□□ -0.27
C4orf48-201ENST00000409248 KRTAP4-5Q9BYR2 181 aa13.35□□□□□ -0.27
C4orf48-201ENST00000409248 PKIGQ9Y2B9 76 aa13.35□□□□□ -0.27
C4orf48-201ENST00000409248 SMR3BP02814 79 aaPredicted RBP13.34□□□□□ -0.27
C4orf48-201ENST00000409248 Q5VSD8 79 aa13.34□□□□□ -0.27
C4orf48-201ENST00000409248 C2orf82Q6UX34 121 aa13.34□□□□□ -0.27
C4orf48-201ENST00000409248 UNQ6190/PRO20217Q6UXQ8 127 aa13.34□□□□□ -0.27
C4orf48-201ENST00000409248 SDIM1Q6ZPB5 146 aa13.34□□□□□ -0.27
C4orf48-201ENST00000409248 FAM229AH3BQW9 127 aa13.33□□□□□ -0.28
C4orf48-201ENST00000409248 RNF151Q2KHN1 245 aa13.33□□□□□ -0.28
C4orf48-201ENST00000409248 TRBV30A0A0K0K1B3 111 aa13.32□□□□□ -0.28
C4orf48-201ENST00000409248 C10orf25Q5T742 122 aa13.32□□□□□ -0.28
C4orf48-201ENST00000409248 CIRBP-AS1Q8TBR5 109 aa13.31□□□□□ -0.28
C4orf48-201ENST00000409248 PLEKHB2Q96CS7 222 aa13.31□□□□□ -0.28
C4orf48-201ENST00000409248 C6orf48Q9UBA6 75 aa13.31□□□□□ -0.28
C4orf48-201ENST00000409248 DNAH8Q96JB1 4490 aa13.3□□□□□ -0.28
C4orf48-201ENST00000409248 LEPROTO15243 131 aa13.3□□□□□ -0.28
C4orf48-201ENST00000409248 SFTA2Q6UW10 78 aa13.3□□□□□ -0.28
C4orf48-201ENST00000409248 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.3□□□□□ -0.28
C4orf48-201ENST00000409248 LINC00528Q8N1L1 170 aa13.29□□□□□ -0.28
C4orf48-201ENST00000409248 SCGB1D1O95968 90 aa13.28□□□□□ -0.28
C4orf48-201ENST00000409248 CIRBPQ14011 172 aaKnown RBP13.28□□□□□ -0.28
C4orf48-201ENST00000409248 ATOH7Q8N100 152 aa13.28□□□□□ -0.28
C4orf48-201ENST00000409248 LOC107984640A0A0U1RRK4 108 aa13.27□□□□□ -0.29
C4orf48-201ENST00000409248 E9PLD3 99 aa13.27□□□□□ -0.29
C4orf48-201ENST00000409248 STPG4Q8N801 248 aa13.27□□□□□ -0.29
C4orf48-201ENST00000409248 J3QQQ9 107 aa13.26□□□□□ -0.29
C4orf48-201ENST00000409248 LGALS3P17931 250 aaKnown RBP13.26□□□□□ -0.29
C4orf48-201ENST00000409248 PCLOQ9Y6V0 5065 aa13.25□□□□□ -0.29
C4orf48-201ENST00000409248 PLA2G1BP04054 148 aaKnown RBP13.25□□□□□ -0.29
C4orf48-201ENST00000409248 SPACA4Q8TDM5 124 aa13.25□□□□□ -0.29
C4orf48-201ENST00000409248 PANO1I0J062 215 aa13.24□□□□□ -0.29
C4orf48-201ENST00000409248 CHTF8P0CG12 524 aa13.24□□□□□ -0.29
C4orf48-201ENST00000409248 TSPEAR-AS2P59090 65 aa13.24□□□□□ -0.29
C4orf48-201ENST00000409248 RPL18AQ02543 176 aaKnown RBP13.24□□□□□ -0.29
C4orf48-201ENST00000409248 DPH3Q96FX2 82 aa13.24□□□□□ -0.29
C4orf48-201ENST00000409248 ZNF625Q96I27 306 aaPredicted RBP13.24□□□□□ -0.29
C4orf48-201ENST00000409248 NDUFA12Q9UI09 145 aa13.24□□□□□ -0.29
C4orf48-201ENST00000409248 MYMXA0A1B0GTQ4 84 aa13.23□□□□□ -0.29
C4orf48-201ENST00000409248 TLX1NBP0CAT3 122 aa13.23□□□□□ -0.29
C4orf48-201ENST00000409248 C9orf116Q5BN46 136 aaPredicted RBP13.23□□□□□ -0.29
C4orf48-201ENST00000409248 LINC00474Q9P2X8 69 aa13.23□□□□□ -0.29
C4orf48-201ENST00000409248 IGKV2-24A0A0C4DH68 120 aa13.22□□□□□ -0.29
C4orf48-201ENST00000409248 HSBP1L1C9JCN9 74 aa13.22□□□□□ -0.29
C4orf48-201ENST00000409248 NMUP48645 174 aa13.22□□□□□ -0.29
C4orf48-201ENST00000409248 ABCA13Q86UQ4 5058 aa13.22□□□□□ -0.29
C4orf48-201ENST00000409248 NDUFC2-KCTD14E9PQ53 114 aa13.21□□□□□ -0.29
C4orf48-201ENST00000409248 HERV-K104P63124 156 aa13.21□□□□□ -0.29
C4orf48-201ENST00000409248 GAGE2BQ13066 116 aa13.21□□□□□ -0.29
C4orf48-201ENST00000409248 A0A096LNI7 61 aa13.2□□□□□ -0.3
C4orf48-201ENST00000409248 PTTG1IPP53801 180 aa13.2□□□□□ -0.3
C4orf48-201ENST00000409248 JOSD1Q15040 202 aaPredicted RBP13.2□□□□□ -0.3
C4orf48-201ENST00000409248 MAJINQ3KP22 176 aa13.2□□□□□ -0.3
C4orf48-201ENST00000409248 A0A087WYN8 130 aa13.19□□□□□ -0.3
C4orf48-201ENST00000409248 ANKRD39Q53RE8 183 aa13.19□□□□□ -0.3
C4orf48-201ENST00000409248 ERG28Q9UKR5 140 aa13.19□□□□□ -0.3
C4orf48-201ENST00000409248 IGKV2D-26A0A0A0MRZ7 120 aa13.18□□□□□ -0.3
C4orf48-201ENST00000409248 INAFM2P0DMQ5 153 aa13.18□□□□□ -0.3
C4orf48-201ENST00000409248 Q6ZRP5 223 aa13.18□□□□□ -0.3
C4orf48-201ENST00000409248 FAT1Q14517 4588 aa13.17□□□□□ -0.3
C4orf48-201ENST00000409248 GAGE2EQ4V326 116 aa13.17□□□□□ -0.3
C4orf48-201ENST00000409248 MEIG1Q5JSS6 88 aa13.17□□□□□ -0.3
C4orf48-201ENST00000409248 PLAC8Q9NZF1 115 aa13.17□□□□□ -0.3
C4orf48-201ENST00000409248 GAGE2DQ9UEU5 116 aa13.17□□□□□ -0.3
C4orf48-201ENST00000409248 LINC00587B1AMM8 73 aa13.16□□□□□ -0.3
C4orf48-201ENST00000409248 PFN2P35080 140 aa13.16□□□□□ -0.3
C4orf48-201ENST00000409248 COX17Q14061 63 aa13.16□□□□□ -0.3
C4orf48-201ENST00000409248 ZNF815PA8K554 130 aa13.14□□□□□ -0.31
C4orf48-201ENST00000409248 VPS13BQ7Z7G8 4022 aa13.13□□□□□ -0.31
C4orf48-201ENST00000409248 LINC00158P58513 81 aa13.13□□□□□ -0.31
C4orf48-201ENST00000409248 RPL37AP61513 92 aaKnown RBP13.13□□□□□ -0.31
C4orf48-201ENST00000409248 SMIM13P0DJ93 91 aa13.11□□□□□ -0.31
C4orf48-201ENST00000409248 PYY3Q5JQD4 70 aa13.11□□□□□ -0.31
C4orf48-201ENST00000409248 C7orf33Q8WU49 177 aa13.11□□□□□ -0.31
C4orf48-201ENST00000409248 TTTY13Q9BZ97 58 aa13.11□□□□□ -0.31
C4orf48-201ENST00000409248 A0A0U1RRA0 63 aa13.1□□□□□ -0.31
C4orf48-201ENST00000409248 VAMP8Q9BV40 100 aa13.1□□□□□ -0.31
C4orf48-201ENST00000409248 XAGE1AQ9HD64 81 aa13.1□□□□□ -0.31
C4orf48-201ENST00000409248 SRRM2Q9UQ35 2752 aaKnown RBP13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 129.1 ms