RNA–Protein interactions for RNA: ENST00000397105.7

SEC13-207, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 883 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-207ENST00000397105 S100A1P23297 94 aa13.27□□□□□ -0.29
SEC13-207ENST00000397105 PTTG1IPP53801 180 aa13.27□□□□□ -0.29
SEC13-207ENST00000397105 GAGE2BQ13066 116 aa13.27□□□□□ -0.29
SEC13-207ENST00000397105 C2orf82Q6UX34 121 aa13.27□□□□□ -0.29
SEC13-207ENST00000397105 PLAC8Q9NZF1 115 aa13.27□□□□□ -0.29
SEC13-207ENST00000397105 C6orf48Q9UBA6 75 aa13.27□□□□□ -0.29
SEC13-207ENST00000397105 TRBV30A0A0K0K1B3 111 aa13.26□□□□□ -0.29
SEC13-207ENST00000397105 SMIM1B2RUZ4 78 aa13.26□□□□□ -0.29
SEC13-207ENST00000397105 LINC00310P59036 64 aa13.26□□□□□ -0.29
SEC13-207ENST00000397105 STPG4Q8N801 248 aa13.26□□□□□ -0.29
SEC13-207ENST00000397105 TRAV12-1A0A0B4J245 112 aa13.24□□□□□ -0.29
SEC13-207ENST00000397105 SPINK8P0C7L1 97 aa13.24□□□□□ -0.29
SEC13-207ENST00000397105 RPL18AQ02543 176 aaKnown RBP13.24□□□□□ -0.29
SEC13-207ENST00000397105 CHTOPQ9Y3Y2 248 aaKnown RBP13.24□□□□□ -0.29
SEC13-207ENST00000397105 LEPROTL1O95214 131 aa13.23□□□□□ -0.29
SEC13-207ENST00000397105 TLX1NBP0CAT3 122 aa13.23□□□□□ -0.29
SEC13-207ENST00000397105 NUPR1O60356 82 aa13.22□□□□□ -0.29
SEC13-207ENST00000397105 HIST1H2BKO60814 126 aa13.22□□□□□ -0.29
SEC13-207ENST00000397105 HIST1H2BJP06899 126 aa13.22□□□□□ -0.29
SEC13-207ENST00000397105 HIST1H2BOP23527 126 aa13.22□□□□□ -0.29
SEC13-207ENST00000397105 HIST1H2BBP33778 126 aa13.22□□□□□ -0.29
SEC13-207ENST00000397105 CXCL5P42830 114 aa13.22□□□□□ -0.29
SEC13-207ENST00000397105 HIST1H2BDP58876 126 aa13.22□□□□□ -0.29
SEC13-207ENST00000397105 HIST1H2BCP62807 126 aa13.22□□□□□ -0.29
SEC13-207ENST00000397105 HIST2H2BEQ16778 126 aa13.22□□□□□ -0.29
SEC13-207ENST00000397105 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.22□□□□□ -0.29
SEC13-207ENST00000397105 COX7B2Q8TF08 81 aa13.22□□□□□ -0.29
SEC13-207ENST00000397105 HIST1H2BHQ93079 126 aa13.22□□□□□ -0.29
SEC13-207ENST00000397105 HIST1H2BNQ99877 126 aa13.22□□□□□ -0.29
SEC13-207ENST00000397105 HIST1H2BMQ99879 126 aa13.22□□□□□ -0.29
SEC13-207ENST00000397105 ZNF22P17026 224 aaPredicted RBP13.21□□□□□ -0.29
SEC13-207ENST00000397105 C11orf86A6NJI1 115 aa13.2□□□□□ -0.3
SEC13-207ENST00000397105 F8VRH5 84 aa13.2□□□□□ -0.3
SEC13-207ENST00000397105 HSPB8Q9UJY1 196 aa13.2□□□□□ -0.3
SEC13-207ENST00000397105 NDUFC2-KCTD14E9PQ53 114 aa13.19□□□□□ -0.3
SEC13-207ENST00000397105 ATP6V1G1O75348 118 aa13.19□□□□□ -0.3
SEC13-207ENST00000397105 INAFM2P0DMQ5 153 aa13.19□□□□□ -0.3
SEC13-207ENST00000397105 TMEM170BQ5T4T1 132 aa13.19□□□□□ -0.3
SEC13-207ENST00000397105 Q6ZRP5 223 aa13.19□□□□□ -0.3
SEC13-207ENST00000397105 IGLV5-39A0A0G2JS06 123 aa13.17□□□□□ -0.3
SEC13-207ENST00000397105 FABP4P15090 132 aa13.17□□□□□ -0.3
SEC13-207ENST00000397105 RPL37AP61513 92 aaKnown RBP13.17□□□□□ -0.3
SEC13-207ENST00000397105 GAGE2EQ4V326 116 aa13.17□□□□□ -0.3
SEC13-207ENST00000397105 C9orf116Q5BN46 136 aaPredicted RBP13.17□□□□□ -0.3
SEC13-207ENST00000397105 C7orf33Q8WU49 177 aa13.17□□□□□ -0.3
SEC13-207ENST00000397105 GAGE2DQ9UEU5 116 aa13.17□□□□□ -0.3
SEC13-207ENST00000397105 H0Y8G0 127 aa13.15□□□□□ -0.3
SEC13-207ENST00000397105 A0A1W2PNN7 141 aa13.14□□□□□ -0.31
SEC13-207ENST00000397105 KRTAP10-4P60372 401 aaPredicted RBP13.12□□□□□ -0.31
SEC13-207ENST00000397105 ODF1Q14990 250 aa13.12□□□□□ -0.31
SEC13-207ENST00000397105 MAP1LC3CQ9BXW4 147 aa13.11□□□□□ -0.31
SEC13-207ENST00000397105 TMEM223A0PJW6 202 aa13.1□□□□□ -0.31
SEC13-207ENST00000397105 PLNP26678 52 aa13.09□□□□□ -0.31
SEC13-207ENST00000397105 FAM168BA1KXE4 195 aa13.08□□□□□ -0.32
SEC13-207ENST00000397105 COA6Q5JTJ3 125 aaKnown RBP13.08□□□□□ -0.32
SEC13-207ENST00000397105 SFTA2Q6UW10 78 aa13.08□□□□□ -0.32
SEC13-207ENST00000397105 C9orf129Q5T035 196 aaKnown RBP13.07□□□□□ -0.32
SEC13-207ENST00000397105 DPM2O94777 84 aa13.05□□□□□ -0.32
SEC13-207ENST00000397105 FAM19A5Q7Z5A7 132 aaPredicted RBP13.05□□□□□ -0.32
SEC13-207ENST00000397105 XAGE1AQ9HD64 81 aa13.05□□□□□ -0.32
SEC13-207ENST00000397105 MYCBP2O75592 4640 aa13.05□□□□□ -0.32
SEC13-207ENST00000397105 PHF5AQ7RTV0 110 aaKnown RBP13.03□□□□□ -0.32
SEC13-207ENST00000397105 PMCHL2Q9BQD1 86 aa13.03□□□□□ -0.32
SEC13-207ENST00000397105 SYS1-DBNDD2H3BUS1 97 aa13.02□□□□□ -0.33
SEC13-207ENST00000397105 IGKCP01834 107 aa13.02□□□□□ -0.33
SEC13-207ENST00000397105 PRR3P79522 188 aaKnown RBP13.02□□□□□ -0.33
SEC13-207ENST00000397105 ZNF625Q96I27 306 aaPredicted RBP13.02□□□□□ -0.33
SEC13-207ENST00000397105 FLG2Q5D862 2391 aaPredicted RBP13.01□□□□□ -0.33
SEC13-207ENST00000397105 PFN2P35080 140 aa13.01□□□□□ -0.33
SEC13-207ENST00000397105 COX17Q14061 63 aa13.01□□□□□ -0.33
SEC13-207ENST00000397105 KRTAP7-1Q8IUC3 87 aa13.01□□□□□ -0.33
SEC13-207ENST00000397105 ERG28Q9UKR5 140 aa13.01□□□□□ -0.33
SEC13-207ENST00000397105 M0QXV9 152 aa12.99□□□□□ -0.33
SEC13-207ENST00000397105 HERVK_113P61574 105 aa12.99□□□□□ -0.33
SEC13-207ENST00000397105 PET117Q6UWS5 81 aa12.98□□□□□ -0.33
SEC13-207ENST00000397105 HNRNPA3P51991 378 aaKnown RBP12.97□□□□□ -0.33
SEC13-207ENST00000397105 SERTAD4-AS1Q5TG53 156 aa12.97□□□□□ -0.33
SEC13-207ENST00000397105 PLEKHB2Q96CS7 222 aa12.97□□□□□ -0.33
SEC13-207ENST00000397105 LEPROTO15243 131 aa12.96□□□□□ -0.33
SEC13-207ENST00000397105 PSORS1C2Q9UIG4 136 aa12.96□□□□□ -0.33
SEC13-207ENST00000397105 C22orf24Q9Y442 160 aa12.96□□□□□ -0.33
SEC13-207ENST00000397105 HERV-K104P63124 156 aa12.95□□□□□ -0.34
SEC13-207ENST00000397105 LBHQ53QV2 105 aaPredicted RBP12.95□□□□□ -0.34
SEC13-207ENST00000397105 LINC01545Q5VT33 79 aa12.95□□□□□ -0.34
SEC13-207ENST00000397105 NDUFA12Q9UI09 145 aa12.95□□□□□ -0.34
SEC13-207ENST00000397105 PKHD1L1Q86WI1 4243 aa12.94□□□□□ -0.34
SEC13-207ENST00000397105 MYMXA0A1B0GTQ4 84 aa12.94□□□□□ -0.34
SEC13-207ENST00000397105 C3orf79P0CE67 100 aa12.94□□□□□ -0.34
SEC13-207ENST00000397105 LINC00158P58513 81 aa12.94□□□□□ -0.34
SEC13-207ENST00000397105 UBE2BP63146 152 aa12.94□□□□□ -0.34
SEC13-207ENST00000397105 PLA2G2DQ9UNK4 145 aa12.94□□□□□ -0.34
SEC13-207ENST00000397105 LINC00587B1AMM8 73 aa12.93□□□□□ -0.34
SEC13-207ENST00000397105 KRTDAPP60985 99 aa12.93□□□□□ -0.34
SEC13-207ENST00000397105 SND1-IT1Q9HBX3 110 aa12.93□□□□□ -0.34
SEC13-207ENST00000397105 J3QQQ9 107 aa12.92□□□□□ -0.34
SEC13-207ENST00000397105 TP73-AS1Q9UF72 201 aa12.92□□□□□ -0.34
SEC13-207ENST00000397105 TSPEAR-AS2P59090 65 aa12.91□□□□□ -0.34
SEC13-207ENST00000397105 C1orf137Q5JT78 98 aa12.91□□□□□ -0.34
SEC13-207ENST00000397105 LGALS3P17931 250 aaKnown RBP12.9□□□□□ -0.34
SEC13-207ENST00000397105 MEIG1Q5JSS6 88 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 132.9 ms