RNA–Protein interactions for RNA: ENST00000396542.5

TNFSF13-204, Transcript of TNF superfamily member 13, humanhuman

TSL 3 BASIC

Gene TNFSF13, Length 726 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-204ENST00000396542 Q8IZM0 81 aa11.28□□□□□ -0.6
TNFSF13-204ENST00000396542 FAM19A2Q8N3H0 131 aa11.28□□□□□ -0.6
TNFSF13-204ENST00000396542 PACRGQ96M98 296 aaPredicted RBP11.28□□□□□ -0.6
TNFSF13-204ENST00000396542 SMIM1B2RUZ4 78 aa11.27□□□□□ -0.61
TNFSF13-204ENST00000396542 NDUFA6P56556 154 aa11.27□□□□□ -0.61
TNFSF13-204ENST00000396542 PLAC8Q9NZF1 115 aa11.27□□□□□ -0.61
TNFSF13-204ENST00000396542 LINC00474Q9P2X8 69 aa11.27□□□□□ -0.61
TNFSF13-204ENST00000396542 C6orf48Q9UBA6 75 aa11.27□□□□□ -0.61
TNFSF13-204ENST00000396542 SRRM2Q9UQ35 2752 aaKnown RBP11.27□□□□□ -0.61
TNFSF13-204ENST00000396542 PTTG1IPP53801 180 aa11.26□□□□□ -0.61
TNFSF13-204ENST00000396542 C2orf82Q6UX34 121 aa11.26□□□□□ -0.61
TNFSF13-204ENST00000396542 IFI27L1Q96BM0 104 aa11.26□□□□□ -0.61
TNFSF13-204ENST00000396542 TRAV12-1A0A0B4J245 112 aa11.25□□□□□ -0.61
TNFSF13-204ENST00000396542 NUPR1O60356 82 aa11.25□□□□□ -0.61
TNFSF13-204ENST00000396542 S100A6P06703 90 aa11.25□□□□□ -0.61
TNFSF13-204ENST00000396542 PRSS2P07478 247 aa11.25□□□□□ -0.61
TNFSF13-204ENST00000396542 MAJINQ3KP22 176 aa11.25□□□□□ -0.61
TNFSF13-204ENST00000396542 TOMM7Q9P0U1 55 aa11.25□□□□□ -0.61
TNFSF13-204ENST00000396542 TRBV30A0A0K0K1B3 111 aa11.24□□□□□ -0.61
TNFSF13-204ENST00000396542 C5orf52A6NGY3 159 aa11.24□□□□□ -0.61
TNFSF13-204ENST00000396542 TLX1NBP0CAT3 122 aa11.24□□□□□ -0.61
TNFSF13-204ENST00000396542 DPH3Q96FX2 82 aa11.24□□□□□ -0.61
TNFSF13-204ENST00000396542 H3BRM9 83 aa11.23□□□□□ -0.61
TNFSF13-204ENST00000396542 ZNF22P17026 224 aaPredicted RBP11.23□□□□□ -0.61
TNFSF13-204ENST00000396542 C6orf226Q5I0X4 101 aa11.23□□□□□ -0.61
TNFSF13-204ENST00000396542 STPG4Q8N801 248 aa11.23□□□□□ -0.61
TNFSF13-204ENST00000396542 C11orf86A6NJI1 115 aa11.22□□□□□ -0.61
TNFSF13-204ENST00000396542 SPINK8P0C7L1 97 aa11.22□□□□□ -0.61
TNFSF13-204ENST00000396542 CKS1BP61024 79 aa11.22□□□□□ -0.61
TNFSF13-204ENST00000396542 GAGE2BQ13066 116 aa11.22□□□□□ -0.61
TNFSF13-204ENST00000396542 LEPROTL1O95214 131 aa11.21□□□□□ -0.61
TNFSF13-204ENST00000396542 PLA2G1BP04054 148 aaKnown RBP11.21□□□□□ -0.61
TNFSF13-204ENST00000396542 CXCL5P42830 114 aa11.21□□□□□ -0.61
TNFSF13-204ENST00000396542 KRTAP10-4P60372 401 aaPredicted RBP11.21□□□□□ -0.61
TNFSF13-204ENST00000396542 SNRPEP62304 92 aaKnown RBP11.21□□□□□ -0.61
TNFSF13-204ENST00000396542 RPL18AQ02543 176 aaKnown RBP11.21□□□□□ -0.61
TNFSF13-204ENST00000396542 COA6Q5JTJ3 125 aaKnown RBP11.21□□□□□ -0.61
TNFSF13-204ENST00000396542 COX7B2Q8TF08 81 aa11.21□□□□□ -0.61
TNFSF13-204ENST00000396542 CHTOPQ9Y3Y2 248 aaKnown RBP11.21□□□□□ -0.61
TNFSF13-204ENST00000396542 IGLV5-39A0A0G2JS06 123 aa11.2□□□□□ -0.62
TNFSF13-204ENST00000396542 Q6ZRP5 223 aa11.2□□□□□ -0.62
TNFSF13-204ENST00000396542 F8VRH5 84 aa11.19□□□□□ -0.62
TNFSF13-204ENST00000396542 NDUFC2-KCTD14E9PQ53 114 aa11.18□□□□□ -0.62
TNFSF13-204ENST00000396542 C9orf116Q5BN46 136 aaPredicted RBP11.18□□□□□ -0.62
TNFSF13-204ENST00000396542 HSPB8Q9UJY1 196 aa11.17□□□□□ -0.62
TNFSF13-204ENST00000396542 A0A1W2PNN7 141 aa11.16□□□□□ -0.62
TNFSF13-204ENST00000396542 INAFM2P0DMQ5 153 aa11.16□□□□□ -0.62
TNFSF13-204ENST00000396542 ODF1Q14990 250 aa11.16□□□□□ -0.62
TNFSF13-204ENST00000396542 TMEM170BQ5T4T1 132 aa11.16□□□□□ -0.62
TNFSF13-204ENST00000396542 FABP4P15090 132 aa11.15□□□□□ -0.62
TNFSF13-204ENST00000396542 RPL37AP61513 92 aaKnown RBP11.15□□□□□ -0.62
TNFSF13-204ENST00000396542 HIST3H2BBQ8N257 126 aa11.15□□□□□ -0.62
TNFSF13-204ENST00000396542 TMEM223A0PJW6 202 aa11.13□□□□□ -0.63
TNFSF13-204ENST00000396542 GAGE2EQ4V326 116 aa11.13□□□□□ -0.63
TNFSF13-204ENST00000396542 C7orf33Q8WU49 177 aa11.13□□□□□ -0.63
TNFSF13-204ENST00000396542 GAGE2DQ9UEU5 116 aa11.13□□□□□ -0.63
TNFSF13-204ENST00000396542 H0Y8G0 127 aa11.12□□□□□ -0.63
TNFSF13-204ENST00000396542 C9orf129Q5T035 196 aaKnown RBP11.11□□□□□ -0.63
TNFSF13-204ENST00000396542 FAM168BA1KXE4 195 aa11.1□□□□□ -0.63
TNFSF13-204ENST00000396542 KRTAP7-1Q8IUC3 87 aa11.09□□□□□ -0.63
TNFSF13-204ENST00000396542 MAP1LC3CQ9BXW4 147 aa11.09□□□□□ -0.63
TNFSF13-204ENST00000396542 PLNP26678 52 aa11.08□□□□□ -0.64
TNFSF13-204ENST00000396542 S100A2P29034 98 aa11.08□□□□□ -0.64
TNFSF13-204ENST00000396542 SFTA2Q6UW10 78 aa11.08□□□□□ -0.64
TNFSF13-204ENST00000396542 HIST1H2BLQ99880 126 aa11.08□□□□□ -0.64
TNFSF13-204ENST00000396542 MYCBP2O75592 4640 aa11.08□□□□□ -0.64
TNFSF13-204ENST00000396542 PKHD1L1Q86WI1 4243 aa11.07□□□□□ -0.64
TNFSF13-204ENST00000396542 AKR1D1P51857 326 aa11.07□□□□□ -0.64
TNFSF13-204ENST00000396542 ZNF625Q96I27 306 aaPredicted RBP11.07□□□□□ -0.64
TNFSF13-204ENST00000396542 DPM2O94777 84 aa11.06□□□□□ -0.64
TNFSF13-204ENST00000396542 PMCHL2Q9BQD1 86 aa11.06□□□□□ -0.64
TNFSF13-204ENST00000396542 XAGE1AQ9HD64 81 aa11.06□□□□□ -0.64
TNFSF13-204ENST00000396542 FLG2Q5D862 2391 aaPredicted RBP11.05□□□□□ -0.64
TNFSF13-204ENST00000396542 SYS1-DBNDD2H3BUS1 97 aa11.05□□□□□ -0.64
TNFSF13-204ENST00000396542 HNRNPA3P51991 378 aaKnown RBP11.05□□□□□ -0.64
TNFSF13-204ENST00000396542 PRR3P79522 188 aaKnown RBP11.05□□□□□ -0.64
TNFSF13-204ENST00000396542 PHF5AQ7RTV0 110 aaKnown RBP11.05□□□□□ -0.64
TNFSF13-204ENST00000396542 FAM19A5Q7Z5A7 132 aaPredicted RBP11.05□□□□□ -0.64
TNFSF13-204ENST00000396542 IGKCP01834 107 aa11.04□□□□□ -0.64
TNFSF13-204ENST00000396542 ERG28Q9UKR5 140 aa11.04□□□□□ -0.64
TNFSF13-204ENST00000396542 COX17Q14061 63 aa11.03□□□□□ -0.64
TNFSF13-204ENST00000396542 SERTAD4-AS1Q5TG53 156 aa11.02□□□□□ -0.65
TNFSF13-204ENST00000396542 M0QXV9 152 aa11.01□□□□□ -0.65
TNFSF13-204ENST00000396542 SMIM6P0DI80 62 aa11.01□□□□□ -0.65
TNFSF13-204ENST00000396542 PFN2P35080 140 aa11.01□□□□□ -0.65
TNFSF13-204ENST00000396542 LINC01545Q5VT33 79 aa11.01□□□□□ -0.65
TNFSF13-204ENST00000396542 PET117Q6UWS5 81 aa11.01□□□□□ -0.65
TNFSF13-204ENST00000396542 PLA2G2DQ9UNK4 145 aa11□□□□□ -0.65
TNFSF13-204ENST00000396542 LEPROTO15243 131 aa10.99□□□□□ -0.65
TNFSF13-204ENST00000396542 C3orf79P0CE67 100 aa10.99□□□□□ -0.65
TNFSF13-204ENST00000396542 TSPEAR-AS2P59090 65 aa10.99□□□□□ -0.65
TNFSF13-204ENST00000396542 KRTAP11-1Q8IUC1 163 aa10.99□□□□□ -0.65
TNFSF13-204ENST00000396542 PSORS1C2Q9UIG4 136 aa10.99□□□□□ -0.65
TNFSF13-204ENST00000396542 HERVK_113P61574 105 aa10.98□□□□□ -0.65
TNFSF13-204ENST00000396542 PLEKHB2Q96CS7 222 aa10.98□□□□□ -0.65
TNFSF13-204ENST00000396542 C22orf24Q9Y442 160 aa10.98□□□□□ -0.65
TNFSF13-204ENST00000396542 HERV-K104P63124 156 aa10.97□□□□□ -0.65
TNFSF13-204ENST00000396542 LINC00518Q8N0U6 118 aa10.97□□□□□ -0.65
TNFSF13-204ENST00000396542 SND1-IT1Q9HBX3 110 aa10.97□□□□□ -0.65
TNFSF13-204ENST00000396542 TP73-AS1Q9UF72 201 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms