RNA–Protein interactions for RNA: ENST00000395859.2

VCPKMT-201, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best) BASIC

Gene VCPKMT, Length 795 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-201ENST00000395859 KRTAP1-4P0C5Y4 121 aa8.22□□□□□ -1.09
VCPKMT-201ENST00000395859 GAGE6Q13070 117 aa8.22□□□□□ -1.09
VCPKMT-201ENST00000395859 C2orf66Q6UXQ4 117 aa8.22□□□□□ -1.09
VCPKMT-201ENST00000395859 VAMP8Q9BV40 100 aa8.22□□□□□ -1.09
VCPKMT-201ENST00000395859 IGLV1-50A0A075B6I6 118 aa8.21□□□□□ -1.1
VCPKMT-201ENST00000395859 HSBP1L1C9JCN9 74 aa8.21□□□□□ -1.1
VCPKMT-201ENST00000395859 Q6ZN92 141 aa8.21□□□□□ -1.1
VCPKMT-201ENST00000395859 SCGB3A1Q96QR1 104 aa8.21□□□□□ -1.1
VCPKMT-201ENST00000395859 TSHBP01222 138 aa8.2□□□□□ -1.1
VCPKMT-201ENST00000395859 PLNP26678 52 aa8.2□□□□□ -1.1
VCPKMT-201ENST00000395859 COTL1Q14019 142 aa8.2□□□□□ -1.1
VCPKMT-201ENST00000395859 TIMM21Q9BVV7 248 aa8.2□□□□□ -1.1
VCPKMT-201ENST00000395859 GVQW2A0A096LPI5 108 aaPredicted RBP8.19□□□□□ -1.1
VCPKMT-201ENST00000395859 A0A1B0GUV1 79 aa8.19□□□□□ -1.1
VCPKMT-201ENST00000395859 TMEM243Q9BU79 118 aa8.19□□□□□ -1.1
VCPKMT-201ENST00000395859 SPANXA1Q9NS26 97 aa8.19□□□□□ -1.1
VCPKMT-201ENST00000395859 CSDC2Q9Y534 153 aaKnown RBP8.19□□□□□ -1.1
VCPKMT-201ENST00000395859 IGLV4-60A0A075B6I1 120 aa8.18□□□□□ -1.1
VCPKMT-201ENST00000395859 IGIPA6NJ69 53 aa8.18□□□□□ -1.1
VCPKMT-201ENST00000395859 HIGD2BQ4VC39 106 aa8.18□□□□□ -1.1
VCPKMT-201ENST00000395859 LCE2CQ5TA81 110 aa8.18□□□□□ -1.1
VCPKMT-201ENST00000395859 LOC100996750A0A140TA64 210 aa8.17□□□□□ -1.1
VCPKMT-201ENST00000395859 F8VRH5 84 aa8.17□□□□□ -1.1
VCPKMT-201ENST00000395859 UBE2L6O14933 153 aa8.17□□□□□ -1.1
VCPKMT-201ENST00000395859 CFAP161Q6P656 301 aa8.17□□□□□ -1.1
VCPKMT-201ENST00000395859 KRTAP4-6Q9BYQ5 205 aa8.17□□□□□ -1.1
VCPKMT-201ENST00000395859 DPM2O94777 84 aa8.16□□□□□ -1.1
VCPKMT-201ENST00000395859 MRPS36P82909 103 aaKnown RBP8.16□□□□□ -1.1
VCPKMT-201ENST00000395859 PMVKQ15126 192 aa8.16□□□□□ -1.1
VCPKMT-201ENST00000395859 LINC00173Q6ZV60 143 aa8.16□□□□□ -1.1
VCPKMT-201ENST00000395859 MRPL52Q86TS9 123 aaKnown RBP8.16□□□□□ -1.1
VCPKMT-201ENST00000395859 DIRC1Q969H9 104 aa8.16□□□□□ -1.1
VCPKMT-201ENST00000395859 A0A1W2PNN7 141 aa8.15□□□□□ -1.1
VCPKMT-201ENST00000395859 H0Y9J4 135 aa8.15□□□□□ -1.1
VCPKMT-201ENST00000395859 ZNF25P17030 456 aaPredicted RBP8.15□□□□□ -1.1
VCPKMT-201ENST00000395859 PMCHL2Q9BQD1 86 aa8.15□□□□□ -1.1
VCPKMT-201ENST00000395859 GAGE12HA6NDE8 117 aa8.14□□□□□ -1.11
VCPKMT-201ENST00000395859 IGKCP01834 107 aa8.14□□□□□ -1.11
VCPKMT-201ENST00000395859 KRTAP9-7A8MTY7 169 aa8.13□□□□□ -1.11
VCPKMT-201ENST00000395859 IGLV7-43P04211 117 aa8.13□□□□□ -1.11
VCPKMT-201ENST00000395859 SEC11AP67812 179 aa8.13□□□□□ -1.11
VCPKMT-201ENST00000395859 SPATA45Q537H7 98 aa8.13□□□□□ -1.11
VCPKMT-201ENST00000395859 C1orf137Q5JT78 98 aa8.13□□□□□ -1.11
VCPKMT-201ENST00000395859 MIEN1Q9BRT3 115 aa8.13□□□□□ -1.11
VCPKMT-201ENST00000395859 UQCR10Q9UDW1 63 aa8.13□□□□□ -1.11
VCPKMT-201ENST00000395859 DLEU1O43261 78 aa8.12□□□□□ -1.11
VCPKMT-201ENST00000395859 PTTG1IPP53801 180 aa8.12□□□□□ -1.11
VCPKMT-201ENST00000395859 C2orf88Q9BSF0 95 aa8.12□□□□□ -1.11
VCPKMT-201ENST00000395859 VCX2Q9H322 139 aa8.12□□□□□ -1.11
VCPKMT-201ENST00000395859 PKIGQ9Y2B9 76 aa8.12□□□□□ -1.11
VCPKMT-201ENST00000395859 PAM16Q9Y3D7 125 aa8.12□□□□□ -1.11
VCPKMT-201ENST00000395859 CHTOPQ9Y3Y2 248 aaKnown RBP8.12□□□□□ -1.11
VCPKMT-201ENST00000395859 DDTP30046 118 aa8.11□□□□□ -1.11
VCPKMT-201ENST00000395859 AMELXQ99217 191 aa8.11□□□□□ -1.11
VCPKMT-201ENST00000395859 CST9LQ9H4G1 147 aa8.11□□□□□ -1.11
VCPKMT-201ENST00000395859 UBE2D4Q9Y2X8 147 aa8.11□□□□□ -1.11
VCPKMT-201ENST00000395859 H0Y8G0 127 aa8.1□□□□□ -1.11
VCPKMT-201ENST00000395859 CCL25O15444 150 aa8.1□□□□□ -1.11
VCPKMT-201ENST00000395859 IGLC3P0DOY3 106 aa8.1□□□□□ -1.11
VCPKMT-201ENST00000395859 AMMECR1LQ6DCA0 310 aa8.1□□□□□ -1.11
VCPKMT-201ENST00000395859 TMEM101Q96IK0 257 aa8.1□□□□□ -1.11
VCPKMT-201ENST00000395859 IGLV4-3A0A075B6K6 122 aa8.09□□□□□ -1.11
VCPKMT-201ENST00000395859 LORP23490 312 aaPredicted RBP8.09□□□□□ -1.11
VCPKMT-201ENST00000395859 RPL13AP40429 203 aaKnown RBP8.09□□□□□ -1.11
VCPKMT-201ENST00000395859 HERVK_113P61574 105 aa8.09□□□□□ -1.11
VCPKMT-201ENST00000395859 RPL39P62891 51 aaKnown RBP8.09□□□□□ -1.11
VCPKMT-201ENST00000395859 LBHQ53QV2 105 aaPredicted RBP8.09□□□□□ -1.11
VCPKMT-201ENST00000395859 FAM19A3Q7Z5A8 133 aa8.09□□□□□ -1.11
VCPKMT-201ENST00000395859 MRPL35Q9NZE8 188 aaKnown RBP8.09□□□□□ -1.11
VCPKMT-201ENST00000395859 C11orf86A6NJI1 115 aa8.08□□□□□ -1.12
VCPKMT-201ENST00000395859 COX8AP10176 69 aa8.08□□□□□ -1.12
VCPKMT-201ENST00000395859 SLC25A34Q6PIV7 304 aa8.08□□□□□ -1.12
VCPKMT-201ENST00000395859 KRTAP11-1Q8IUC1 163 aa8.08□□□□□ -1.12
VCPKMT-201ENST00000395859 CARD19Q96LW7 228 aa8.08□□□□□ -1.12
VCPKMT-201ENST00000395859 FOXI1Q12951 378 aa8.07□□□□□ -1.12
VCPKMT-201ENST00000395859 PHF5AQ7RTV0 110 aaKnown RBP8.07□□□□□ -1.12
VCPKMT-201ENST00000395859 BOD1L2Q8IYS8 172 aa8.07□□□□□ -1.12
VCPKMT-201ENST00000395859 LINC00526Q96FQ7 95 aa8.07□□□□□ -1.12
VCPKMT-201ENST00000395859 TINCRA0A1B0GVN0 87 aa8.06□□□□□ -1.12
VCPKMT-201ENST00000395859 FGF6P10767 208 aa8.06□□□□□ -1.12
VCPKMT-201ENST00000395859 LINC01547P58512 204 aaPredicted RBP8.06□□□□□ -1.12
VCPKMT-201ENST00000395859 TPRXLQ17RH7 258 aa8.06□□□□□ -1.12
VCPKMT-201ENST00000395859 ZC2HC1BQ5TFG8 222 aa8.06□□□□□ -1.12
VCPKMT-201ENST00000395859 ATOH7Q8N100 152 aa8.06□□□□□ -1.12
VCPKMT-201ENST00000395859 OR5A1Q8NGJ0 315 aa8.06□□□□□ -1.12
VCPKMT-201ENST00000395859 CHCHD10Q8WYQ3 142 aaPredicted RBP8.06□□□□□ -1.12
VCPKMT-201ENST00000395859 IGKV3OR2-268A0A0C4DH90 116 aa8.05□□□□□ -1.12
VCPKMT-201ENST00000395859 PCP4L1A6NKN8 68 aa8.05□□□□□ -1.12
VCPKMT-201ENST00000395859 E9PLD3 99 aa8.05□□□□□ -1.12
VCPKMT-201ENST00000395859 TSPAN13O95857 204 aa8.05□□□□□ -1.12
VCPKMT-201ENST00000395859 C9orf116Q5BN46 136 aaPredicted RBP8.05□□□□□ -1.12
VCPKMT-201ENST00000395859 IGLV4-69A0A075B6H9 119 aa8.04□□□□□ -1.12
VCPKMT-201ENST00000395859 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.04□□□□□ -1.12
VCPKMT-201ENST00000395859 IGKV2-29A2NJV5 120 aaPredicted RBP8.04□□□□□ -1.12
VCPKMT-201ENST00000395859 UBE2D1P51668 147 aa8.04□□□□□ -1.12
VCPKMT-201ENST00000395859 HERVK_113P63121 156 aa8.04□□□□□ -1.12
VCPKMT-201ENST00000395859 PRO1933Q9H354 126 aa8.04□□□□□ -1.12
VCPKMT-201ENST00000395859 CDC42SE2Q9NRR3 84 aa8.04□□□□□ -1.12
VCPKMT-201ENST00000395859 HIGD1BQ9P298 99 aa8.04□□□□□ -1.12
VCPKMT-201ENST00000395859 IGLV5-45A0A087WSX0 123 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms