RNA–Protein interactions for RNA: ENST00000394986.5

SNCA-203, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,420 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-203ENST00000394986 LOC107984640A0A0U1RRK4 108 aa12.65□□□□□ -0.38
SNCA-203ENST00000394986 ZNF22P17026 224 aaPredicted RBP12.65□□□□□ -0.38
SNCA-203ENST00000394986 A0A087WYN8 130 aa12.64□□□□□ -0.39
SNCA-203ENST00000394986 C11orf86A6NJI1 115 aa12.64□□□□□ -0.39
SNCA-203ENST00000394986 EPM2AB3EWF7 344 aa12.64□□□□□ -0.39
SNCA-203ENST00000394986 F8WDY8 70 aa12.64□□□□□ -0.39
SNCA-203ENST00000394986 LEPROTL1O95214 131 aa12.64□□□□□ -0.39
SNCA-203ENST00000394986 GAGE2BQ13066 116 aa12.64□□□□□ -0.39
SNCA-203ENST00000394986 RNF151Q2KHN1 245 aa12.64□□□□□ -0.39
SNCA-203ENST00000394986 Q8IZM0 81 aa12.64□□□□□ -0.39
SNCA-203ENST00000394986 LINC00528Q8N1L1 170 aa12.64□□□□□ -0.39
SNCA-203ENST00000394986 CHTOPQ9Y3Y2 248 aaKnown RBP12.64□□□□□ -0.39
SNCA-203ENST00000394986 FABP4P15090 132 aa12.63□□□□□ -0.39
SNCA-203ENST00000394986 RPL18AQ02543 176 aaKnown RBP12.63□□□□□ -0.39
SNCA-203ENST00000394986 C6orf226Q5I0X4 101 aa12.63□□□□□ -0.39
SNCA-203ENST00000394986 ABCA13Q86UQ4 5058 aa12.63□□□□□ -0.39
SNCA-203ENST00000394986 TRAV12-1A0A0B4J245 112 aa12.62□□□□□ -0.39
SNCA-203ENST00000394986 H0Y8G0 127 aa12.62□□□□□ -0.39
SNCA-203ENST00000394986 H3BRM9 83 aa12.62□□□□□ -0.39
SNCA-203ENST00000394986 PTTG1IPP53801 180 aa12.62□□□□□ -0.39
SNCA-203ENST00000394986 CKS1BP61024 79 aa12.62□□□□□ -0.39
SNCA-203ENST00000394986 PKIGQ9Y2B9 76 aa12.62□□□□□ -0.39
SNCA-203ENST00000394986 C9orf116Q5BN46 136 aaPredicted RBP12.61□□□□□ -0.39
SNCA-203ENST00000394986 STPG4Q8N801 248 aa12.61□□□□□ -0.39
SNCA-203ENST00000394986 COX7B2Q8TF08 81 aa12.61□□□□□ -0.39
SNCA-203ENST00000394986 FAM229AH3BQW9 127 aa12.6□□□□□ -0.39
SNCA-203ENST00000394986 TMEM170BQ5T4T1 132 aa12.6□□□□□ -0.39
SNCA-203ENST00000394986 TRBV30A0A0K0K1B3 111 aa12.59□□□□□ -0.39
SNCA-203ENST00000394986 PLAC8Q9NZF1 115 aa12.59□□□□□ -0.39
SNCA-203ENST00000394986 Q6ZRP5 223 aa12.58□□□□□ -0.4
SNCA-203ENST00000394986 LINC00474Q9P2X8 69 aa12.58□□□□□ -0.4
SNCA-203ENST00000394986 HSPB8Q9UJY1 196 aa12.58□□□□□ -0.4
SNCA-203ENST00000394986 IGLV5-39A0A0G2JS06 123 aa12.57□□□□□ -0.4
SNCA-203ENST00000394986 F8VRH5 84 aa12.57□□□□□ -0.4
SNCA-203ENST00000394986 ODF1Q14990 250 aa12.57□□□□□ -0.4
SNCA-203ENST00000394986 VPS13BQ7Z7G8 4022 aa12.56□□□□□ -0.4
SNCA-203ENST00000394986 PCLOQ9Y6V0 5065 aa12.56□□□□□ -0.4
SNCA-203ENST00000394986 TLX1NBP0CAT3 122 aa12.55□□□□□ -0.4
SNCA-203ENST00000394986 GAGE2EQ4V326 116 aa12.55□□□□□ -0.4
SNCA-203ENST00000394986 GAGE2DQ9UEU5 116 aa12.55□□□□□ -0.4
SNCA-203ENST00000394986 CXCL5P42830 114 aa12.54□□□□□ -0.4
SNCA-203ENST00000394986 PMCHL2Q9BQD1 86 aa12.54□□□□□ -0.4
SNCA-203ENST00000394986 A0A1W2PNN7 141 aa12.54□□□□□ -0.4
SNCA-203ENST00000394986 NDUFC2-KCTD14E9PQ53 114 aa12.53□□□□□ -0.4
SNCA-203ENST00000394986 COA6Q5JTJ3 125 aaKnown RBP12.53□□□□□ -0.4
SNCA-203ENST00000394986 SRRM2Q9UQ35 2752 aaKnown RBP12.53□□□□□ -0.4
SNCA-203ENST00000394986 TMEM223A0PJW6 202 aa12.52□□□□□ -0.41
SNCA-203ENST00000394986 PLA2G1BP04054 148 aaKnown RBP12.51□□□□□ -0.41
SNCA-203ENST00000394986 KRTAP10-4P60372 401 aaPredicted RBP12.51□□□□□ -0.41
SNCA-203ENST00000394986 FAM168BA1KXE4 195 aa12.5□□□□□ -0.41
SNCA-203ENST00000394986 RPL37AP61513 92 aaKnown RBP12.5□□□□□ -0.41
SNCA-203ENST00000394986 MAP1LC3CQ9BXW4 147 aa12.5□□□□□ -0.41
SNCA-203ENST00000394986 C9orf129Q5T035 196 aaKnown RBP12.48□□□□□ -0.41
SNCA-203ENST00000394986 SYS1-DBNDD2H3BUS1 97 aa12.46□□□□□ -0.41
SNCA-203ENST00000394986 DPM2O94777 84 aa12.46□□□□□ -0.41
SNCA-203ENST00000394986 INAFM2P0DMQ5 153 aa12.46□□□□□ -0.41
SNCA-203ENST00000394986 FAM19A5Q7Z5A7 132 aaPredicted RBP12.46□□□□□ -0.41
SNCA-203ENST00000394986 C7orf33Q8WU49 177 aa12.46□□□□□ -0.41
SNCA-203ENST00000394986 XAGE1AQ9HD64 81 aa12.46□□□□□ -0.41
SNCA-203ENST00000394986 PLNP26678 52 aa12.45□□□□□ -0.42
SNCA-203ENST00000394986 ZNF625Q96I27 306 aaPredicted RBP12.45□□□□□ -0.42
SNCA-203ENST00000394986 IGKCP01834 107 aa12.45□□□□□ -0.42
SNCA-203ENST00000394986 KRTAP7-1Q8IUC3 87 aa12.45□□□□□ -0.42
SNCA-203ENST00000394986 PHF5AQ7RTV0 110 aaKnown RBP12.44□□□□□ -0.42
SNCA-203ENST00000394986 C3orf79P0CE67 100 aa12.42□□□□□ -0.42
SNCA-203ENST00000394986 PFN2P35080 140 aa12.42□□□□□ -0.42
SNCA-203ENST00000394986 HNRNPA3P51991 378 aaKnown RBP12.41□□□□□ -0.42
SNCA-203ENST00000394986 TSPEAR-AS2P59090 65 aa12.41□□□□□ -0.42
SNCA-203ENST00000394986 ERG28Q9UKR5 140 aa12.41□□□□□ -0.42
SNCA-203ENST00000394986 KRTDAPP60985 99 aa12.4□□□□□ -0.42
SNCA-203ENST00000394986 SERTAD4-AS1Q5TG53 156 aa12.4□□□□□ -0.42
SNCA-203ENST00000394986 LINC01545Q5VT33 79 aa12.39□□□□□ -0.43
SNCA-203ENST00000394986 PET117Q6UWS5 81 aa12.39□□□□□ -0.43
SNCA-203ENST00000394986 M0QXV9 152 aa12.38□□□□□ -0.43
SNCA-203ENST00000394986 LEPROTO15243 131 aa12.37□□□□□ -0.43
SNCA-203ENST00000394986 PRR3P79522 188 aaKnown RBP12.37□□□□□ -0.43
SNCA-203ENST00000394986 HERVK_113P61574 105 aa12.37□□□□□ -0.43
SNCA-203ENST00000394986 SFTA2Q6UW10 78 aa12.37□□□□□ -0.43
SNCA-203ENST00000394986 HIST3H2BBQ8N257 126 aa12.37□□□□□ -0.43
SNCA-203ENST00000394986 NDUFA12Q9UI09 145 aa12.37□□□□□ -0.43
SNCA-203ENST00000394986 FLG2Q5D862 2391 aaPredicted RBP12.36□□□□□ -0.43
SNCA-203ENST00000394986 A0A0U1RRA0 63 aa12.36□□□□□ -0.43
SNCA-203ENST00000394986 KRTAP11-1Q8IUC1 163 aa12.36□□□□□ -0.43
SNCA-203ENST00000394986 PLEKHB2Q96CS7 222 aa12.35□□□□□ -0.43
SNCA-203ENST00000394986 J3QQQ9 107 aa12.34□□□□□ -0.43
SNCA-203ENST00000394986 SND1-IT1Q9HBX3 110 aa12.34□□□□□ -0.43
SNCA-203ENST00000394986 MYCBP2O75592 4640 aa12.34□□□□□ -0.43
SNCA-203ENST00000394986 S100A6P06703 90 aa12.33□□□□□ -0.44
SNCA-203ENST00000394986 LINC00158P58513 81 aa12.33□□□□□ -0.44
SNCA-203ENST00000394986 COX17Q14061 63 aa12.33□□□□□ -0.44
SNCA-203ENST00000394986 PSORS1C2Q9UIG4 136 aa12.33□□□□□ -0.44
SNCA-203ENST00000394986 C22orf24Q9Y442 160 aa12.33□□□□□ -0.44
SNCA-203ENST00000394986 SMIM13P0DJ93 91 aa12.32□□□□□ -0.44
SNCA-203ENST00000394986 MEIG1Q5JSS6 88 aa12.32□□□□□ -0.44
SNCA-203ENST00000394986 HIST1H2BLQ99880 126 aa12.32□□□□□ -0.44
SNCA-203ENST00000394986 PKHD1L1Q86WI1 4243 aa12.32□□□□□ -0.44
SNCA-203ENST00000394986 MYMXA0A1B0GTQ4 84 aa12.31□□□□□ -0.44
SNCA-203ENST00000394986 S100A2P29034 98 aa12.31□□□□□ -0.44
SNCA-203ENST00000394986 E9PLD3 99 aa12.3□□□□□ -0.44
SNCA-203ENST00000394986 LGALS3P17931 250 aaKnown RBP12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms