RNA–Protein interactions for RNA: ENST00000394157.7

PSEN1-203, Transcript of presenilin 1, humanhuman

TSL 2 BASIC

Gene PSEN1, Length 1,249 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-203ENST00000394157 SLPIP03973 132 aa12.57□□□□□ -0.4
PSEN1-203ENST00000394157 CKS1BP61024 79 aa12.57□□□□□ -0.4
PSEN1-203ENST00000394157 SFTA2Q6UW10 78 aa12.57□□□□□ -0.4
PSEN1-203ENST00000394157 LINC00526Q96FQ7 95 aa12.57□□□□□ -0.4
PSEN1-203ENST00000394157 PKD1P98161 4303 aa12.57□□□□□ -0.4
PSEN1-203ENST00000394157 RNF151Q2KHN1 245 aa12.56□□□□□ -0.4
PSEN1-203ENST00000394157 C9orf163Q8N9P6 203 aa12.56□□□□□ -0.4
PSEN1-203ENST00000394157 CARD19Q96LW7 228 aa12.56□□□□□ -0.4
PSEN1-203ENST00000394157 PKIGQ9Y2B9 76 aa12.55□□□□□ -0.4
PSEN1-203ENST00000394157 DNAH11Q96DT5 4516 aa12.54□□□□□ -0.4
PSEN1-203ENST00000394157 TRBV30A0A0K0K1B3 111 aa12.54□□□□□ -0.4
PSEN1-203ENST00000394157 PLEKHB2Q96CS7 222 aa12.54□□□□□ -0.4
PSEN1-203ENST00000394157 LEPROTO15243 131 aa12.53□□□□□ -0.4
PSEN1-203ENST00000394157 SCGB1D1O95968 90 aa12.53□□□□□ -0.4
PSEN1-203ENST00000394157 Q6ZRU5 148 aa12.53□□□□□ -0.4
PSEN1-203ENST00000394157 HECTD4Q9Y4D8 3996 aa12.52□□□□□ -0.4
PSEN1-203ENST00000394157 E9PLD3 99 aa12.52□□□□□ -0.41
PSEN1-203ENST00000394157 GCSHP23434 173 aa12.52□□□□□ -0.41
PSEN1-203ENST00000394157 C2orf82Q6UX34 121 aa12.51□□□□□ -0.41
PSEN1-203ENST00000394157 UNQ6190/PRO20217Q6UXQ8 127 aa12.51□□□□□ -0.41
PSEN1-203ENST00000394157 C16orf90A8MZG2 172 aa12.5□□□□□ -0.41
PSEN1-203ENST00000394157 J3QQQ9 107 aa12.49□□□□□ -0.41
PSEN1-203ENST00000394157 JOSD1Q15040 202 aaPredicted RBP12.49□□□□□ -0.41
PSEN1-203ENST00000394157 C10orf25Q5T742 122 aa12.49□□□□□ -0.41
PSEN1-203ENST00000394157 STPG4Q8N801 248 aa12.49□□□□□ -0.41
PSEN1-203ENST00000394157 C6orf48Q9UBA6 75 aa12.49□□□□□ -0.41
PSEN1-203ENST00000394157 HSBP1L1C9JCN9 74 aa12.48□□□□□ -0.41
PSEN1-203ENST00000394157 FUSP35637 526 aaKnown RBP eCLIP12.48□□□□□ -0.41
PSEN1-203ENST00000394157 NMUP48645 174 aa12.48□□□□□ -0.41
PSEN1-203ENST00000394157 ATOH7Q8N100 152 aa12.48□□□□□ -0.41
PSEN1-203ENST00000394157 ZNF625Q96I27 306 aaPredicted RBP12.48□□□□□ -0.41
PSEN1-203ENST00000394157 LGALS3P17931 250 aaKnown RBP12.47□□□□□ -0.41
PSEN1-203ENST00000394157 LOC107984640A0A0U1RRK4 108 aa12.46□□□□□ -0.41
PSEN1-203ENST00000394157 MYMXA0A1B0GTQ4 84 aa12.46□□□□□ -0.41
PSEN1-203ENST00000394157 TLX1NBP0CAT3 122 aa12.46□□□□□ -0.41
PSEN1-203ENST00000394157 HERV-K104P63124 156 aa12.46□□□□□ -0.41
PSEN1-203ENST00000394157 SDIM1Q6ZPB5 146 aa12.46□□□□□ -0.41
PSEN1-203ENST00000394157 NDUFA12Q9UI09 145 aa12.46□□□□□ -0.41
PSEN1-203ENST00000394157 GHRHP01286 108 aa12.45□□□□□ -0.42
PSEN1-203ENST00000394157 KRTAP17-1Q9BYP8 105 aa12.45□□□□□ -0.42
PSEN1-203ENST00000394157 BIRC6Q9NR09 4857 aa12.45□□□□□ -0.42
PSEN1-203ENST00000394157 TSPEAR-AS2P59090 65 aa12.44□□□□□ -0.42
PSEN1-203ENST00000394157 LINC00587B1AMM8 73 aa12.43□□□□□ -0.42
PSEN1-203ENST00000394157 COX17Q14061 63 aa12.43□□□□□ -0.42
PSEN1-203ENST00000394157 LINC01620Q4KN68 170 aa12.43□□□□□ -0.42
PSEN1-203ENST00000394157 NDUFC2-KCTD14E9PQ53 114 aa12.42□□□□□ -0.42
PSEN1-203ENST00000394157 KRTAP10-1P60331 282 aa12.42□□□□□ -0.42
PSEN1-203ENST00000394157 ANKRD39Q53RE8 183 aa12.42□□□□□ -0.42
PSEN1-203ENST00000394157 LINC00474Q9P2X8 69 aa12.42□□□□□ -0.42
PSEN1-203ENST00000394157 DNAH5Q8TE73 4624 aa12.42□□□□□ -0.42
PSEN1-203ENST00000394157 PKHD1P08F94 4074 aa12.41□□□□□ -0.42
PSEN1-203ENST00000394157 IGKV2D-26A0A0A0MRZ7 120 aa12.4□□□□□ -0.42
PSEN1-203ENST00000394157 C9orf116Q5BN46 136 aaPredicted RBP12.4□□□□□ -0.42
PSEN1-203ENST00000394157 PYY3Q5JQD4 70 aa12.4□□□□□ -0.42
PSEN1-203ENST00000394157 ERG28Q9UKR5 140 aa12.4□□□□□ -0.42
PSEN1-203ENST00000394157 EPPK1P58107 5090 aaKnown RBP12.4□□□□□ -0.43
PSEN1-203ENST00000394157 MAJINQ3KP22 176 aa12.39□□□□□ -0.43
PSEN1-203ENST00000394157 PTTG1IPP53801 180 aa12.38□□□□□ -0.43
PSEN1-203ENST00000394157 RPL18AQ02543 176 aaKnown RBP12.38□□□□□ -0.43
PSEN1-203ENST00000394157 Q6ZSA8 131 aa12.38□□□□□ -0.43
PSEN1-203ENST00000394157 FAM229AH3BQW9 127 aa12.37□□□□□ -0.43
PSEN1-203ENST00000394157 CIRBPQ14011 172 aaKnown RBP12.37□□□□□ -0.43
PSEN1-203ENST00000394157 Q6ZRP5 223 aa12.37□□□□□ -0.43
PSEN1-203ENST00000394157 A0A096LNI7 61 aa12.36□□□□□ -0.43
PSEN1-203ENST00000394157 ZNF815PA8K554 130 aa12.36□□□□□ -0.43
PSEN1-203ENST00000394157 GAGE2BQ13066 116 aa12.36□□□□□ -0.43
PSEN1-203ENST00000394157 MEIG1Q5JSS6 88 aa12.36□□□□□ -0.43
PSEN1-203ENST00000394157 VAMP8Q9BV40 100 aa12.36□□□□□ -0.43
PSEN1-203ENST00000394157 PFN2P35080 140 aa12.35□□□□□ -0.43
PSEN1-203ENST00000394157 IGKV2-24A0A0C4DH68 120 aa12.34□□□□□ -0.43
PSEN1-203ENST00000394157 SPACA4Q8TDM5 124 aa12.34□□□□□ -0.43
PSEN1-203ENST00000394157 DYNC1H1Q14204 4646 aaKnown RBP12.33□□□□□ -0.44
PSEN1-203ENST00000394157 A0A0J9YXY3 114 aa12.33□□□□□ -0.44
PSEN1-203ENST00000394157 LINC00158P58513 81 aa12.33□□□□□ -0.44
PSEN1-203ENST00000394157 GAGE2EQ4V326 116 aa12.33□□□□□ -0.44
PSEN1-203ENST00000394157 GAGE2DQ9UEU5 116 aa12.33□□□□□ -0.44
PSEN1-203ENST00000394157 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.33□□□□□ -0.44
PSEN1-203ENST00000394157 FAM30AQ9NZY2 134 aa12.32□□□□□ -0.44
PSEN1-203ENST00000394157 LOC105371267A0A1B0GV96 52 aa12.31□□□□□ -0.44
PSEN1-203ENST00000394157 TIMM17BO60830 172 aa12.31□□□□□ -0.44
PSEN1-203ENST00000394157 CHTF8P0CG12 524 aa12.31□□□□□ -0.44
PSEN1-203ENST00000394157 SMIM13P0DJ93 91 aa12.31□□□□□ -0.44
PSEN1-203ENST00000394157 SPATA45Q537H7 98 aa12.31□□□□□ -0.44
PSEN1-203ENST00000394157 PCP2Q8IVA1 136 aa12.31□□□□□ -0.44
PSEN1-203ENST00000394157 DPH3Q96FX2 82 aa12.31□□□□□ -0.44
PSEN1-203ENST00000394157 TTTY13Q9BZ97 58 aa12.31□□□□□ -0.44
PSEN1-203ENST00000394157 PAM16Q9Y3D7 125 aa12.31□□□□□ -0.44
PSEN1-203ENST00000394157 LRP1BQ9NZR2 4599 aa12.3□□□□□ -0.44
PSEN1-203ENST00000394157 CDK2AP2O75956 126 aa12.3□□□□□ -0.44
PSEN1-203ENST00000394157 PANO1I0J062 215 aa12.29□□□□□ -0.44
PSEN1-203ENST00000394157 SCGB1D4Q6XE38 83 aa12.29□□□□□ -0.44
PSEN1-203ENST00000394157 SMIM6P0DI80 62 aa12.28□□□□□ -0.44
PSEN1-203ENST00000394157 COX8AP10176 69 aa12.28□□□□□ -0.44
PSEN1-203ENST00000394157 S100A12P80511 92 aa12.28□□□□□ -0.44
PSEN1-203ENST00000394157 SND1-IT1Q9HBX3 110 aa12.28□□□□□ -0.44
PSEN1-203ENST00000394157 DLEU1O43261 78 aa12.27□□□□□ -0.45
PSEN1-203ENST00000394157 C9orf129Q5T035 196 aaKnown RBP12.27□□□□□ -0.45
PSEN1-203ENST00000394157 BOD1L2Q8IYS8 172 aa12.27□□□□□ -0.45
PSEN1-203ENST00000394157 MIR7-3HGQ8N6C7 128 aa12.27□□□□□ -0.45
PSEN1-203ENST00000394157 XAGE1AQ9HD64 81 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 122 ms