RNA–Protein interactions for RNA: ENST00000393091.6

USP44-202, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 3,161 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-202ENST00000393091 CARD19Q96LW7 228 aa8.55□□□□□ -1.04
USP44-202ENST00000393091 HERVK_113P61574 105 aa8.54□□□□□ -1.04
USP44-202ENST00000393091 JOSD1Q15040 202 aaPredicted RBP8.54□□□□□ -1.04
USP44-202ENST00000393091 PPDPFQ9H3Y8 114 aa8.54□□□□□ -1.04
USP44-202ENST00000393091 GCSHP23434 173 aa8.53□□□□□ -1.04
USP44-202ENST00000393091 HERV-K104P63124 156 aa8.53□□□□□ -1.04
USP44-202ENST00000393091 TMEM170BQ5T4T1 132 aa8.53□□□□□ -1.04
USP44-202ENST00000393091 Q6ZRU5 148 aa8.53□□□□□ -1.04
USP44-202ENST00000393091 HIGD2BQ4VC39 106 aa8.53□□□□□ -1.04
USP44-202ENST00000393091 C6orf48Q9UBA6 75 aa8.53□□□□□ -1.04
USP44-202ENST00000393091 LECT2O14960 151 aa8.52□□□□□ -1.05
USP44-202ENST00000393091 PRSS2P07478 247 aa8.52□□□□□ -1.05
USP44-202ENST00000393091 CAMK2N2Q96S95 79 aa8.51□□□□□ -1.05
USP44-202ENST00000393091 LRP1BQ9NZR2 4599 aa8.51□□□□□ -1.05
USP44-202ENST00000393091 LOC107984156A0A0G2JMH3 177 aa8.51□□□□□ -1.05
USP44-202ENST00000393091 ARL17AQ8IVW1 177 aa8.51□□□□□ -1.05
USP44-202ENST00000393091 LOC107984640A0A0U1RRK4 108 aa8.51□□□□□ -1.05
USP44-202ENST00000393091 C6orf226Q5I0X4 101 aa8.5□□□□□ -1.05
USP44-202ENST00000393091 LINC00474Q9P2X8 69 aa8.5□□□□□ -1.05
USP44-202ENST00000393091 PLA2G2DQ9UNK4 145 aa8.5□□□□□ -1.05
USP44-202ENST00000393091 APOBP04114 4563 aaKnown RBP8.5□□□□□ -1.05
USP44-202ENST00000393091 C16orf90A8MZG2 172 aa8.5□□□□□ -1.05
USP44-202ENST00000393091 CDK2AP2O75956 126 aa8.5□□□□□ -1.05
USP44-202ENST00000393091 TIMM17BO60830 172 aa8.49□□□□□ -1.05
USP44-202ENST00000393091 C10orf25Q5T742 122 aa8.49□□□□□ -1.05
USP44-202ENST00000393091 LINC00587B1AMM8 73 aa8.49□□□□□ -1.05
USP44-202ENST00000393091 J3QQQ9 107 aa8.49□□□□□ -1.05
USP44-202ENST00000393091 TSPEAR-AS2P59090 65 aa8.49□□□□□ -1.05
USP44-202ENST00000393091 UNQ6190/PRO20217Q6UXQ8 127 aa8.49□□□□□ -1.05
USP44-202ENST00000393091 NDUFC2-KCTD14E9PQ53 114 aa8.49□□□□□ -1.05
USP44-202ENST00000393091 KRTAP10-1P60331 282 aa8.49□□□□□ -1.05
USP44-202ENST00000393091 CKS1BP61024 79 aa8.49□□□□□ -1.05
USP44-202ENST00000393091 SPACA4Q8TDM5 124 aa8.49□□□□□ -1.05
USP44-202ENST00000393091 H0Y8G0 127 aa8.48□□□□□ -1.05
USP44-202ENST00000393091 PMCHL2Q9BQD1 86 aa8.48□□□□□ -1.05
USP44-202ENST00000393091 EPPK1P58107 5090 aaKnown RBP8.48□□□□□ -1.05
USP44-202ENST00000393091 PTTG1IPP53801 180 aa8.47□□□□□ -1.05
USP44-202ENST00000393091 MYMXA0A1B0GTQ4 84 aa8.47□□□□□ -1.05
USP44-202ENST00000393091 DLEU1O43261 78 aa8.47□□□□□ -1.05
USP44-202ENST00000393091 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.46□□□□□ -1.05
USP44-202ENST00000393091 C2orf82Q6UX34 121 aa8.46□□□□□ -1.05
USP44-202ENST00000393091 IGLV5-37A0A075B6J1 123 aa8.46□□□□□ -1.06
USP44-202ENST00000393091 PLAC8Q9NZF1 115 aa8.46□□□□□ -1.06
USP44-202ENST00000393091 NDUFA12Q9UI09 145 aa8.45□□□□□ -1.06
USP44-202ENST00000393091 PKHD1L1Q86WI1 4243 aa8.45□□□□□ -1.06
USP44-202ENST00000393091 A0A0J9YXY3 114 aa8.45□□□□□ -1.06
USP44-202ENST00000393091 TMA7Q9Y2S6 64 aaKnown RBP8.45□□□□□ -1.06
USP44-202ENST00000393091 IGKV2D-26A0A0A0MRZ7 120 aa8.44□□□□□ -1.06
USP44-202ENST00000393091 ANKRD39Q53RE8 183 aa8.44□□□□□ -1.06
USP44-202ENST00000393091 LINC00526Q96FQ7 95 aa8.44□□□□□ -1.06
USP44-202ENST00000393091 ERG28Q9UKR5 140 aa8.44□□□□□ -1.06
USP44-202ENST00000393091 LOC105371267A0A1B0GV96 52 aa8.44□□□□□ -1.06
USP44-202ENST00000393091 STPG4Q8N801 248 aa8.44□□□□□ -1.06
USP44-202ENST00000393091 PYY3Q5JQD4 70 aa8.43□□□□□ -1.06
USP44-202ENST00000393091 Q6ZRP5 223 aa8.43□□□□□ -1.06
USP44-202ENST00000393091 VPS13BQ7Z7G8 4022 aa8.43□□□□□ -1.06
USP44-202ENST00000393091 LGALS3P17931 250 aaKnown RBP8.43□□□□□ -1.06
USP44-202ENST00000393091 TOMM7Q9P0U1 55 aa8.43□□□□□ -1.06
USP44-202ENST00000393091 BIRC6Q9NR09 4857 aa8.43□□□□□ -1.06
USP44-202ENST00000393091 LITAFQ99732 161 aa8.43□□□□□ -1.06
USP44-202ENST00000393091 A0A096LNI7 61 aa8.42□□□□□ -1.06
USP44-202ENST00000393091 SCGB1D1O95968 90 aa8.42□□□□□ -1.06
USP44-202ENST00000393091 XGP55808 180 aa8.41□□□□□ -1.06
USP44-202ENST00000393091 TP73-AS1Q9UF72 201 aa8.41□□□□□ -1.06
USP44-202ENST00000393091 Q6ZVH6 145 aa8.4□□□□□ -1.06
USP44-202ENST00000393091 BOD1L2Q8IYS8 172 aa8.4□□□□□ -1.06
USP44-202ENST00000393091 HSBP1L1C9JCN9 74 aa8.4□□□□□ -1.06
USP44-202ENST00000393091 SPANXDQ9BXN6 97 aa8.4□□□□□ -1.06
USP44-202ENST00000393091 SPANXCQ9NY87 97 aa8.4□□□□□ -1.06
USP44-202ENST00000393091 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.4□□□□□ -1.06
USP44-202ENST00000393091 C9orf129Q5T035 196 aaKnown RBP8.4□□□□□ -1.07
USP44-202ENST00000393091 COX8AP10176 69 aa8.39□□□□□ -1.07
USP44-202ENST00000393091 SPANXB1Q9NS25 103 aaPredicted RBP8.39□□□□□ -1.07
USP44-202ENST00000393091 FAM30AQ9NZY2 134 aa8.39□□□□□ -1.07
USP44-202ENST00000393091 SMIM6P0DI80 62 aa8.39□□□□□ -1.07
USP44-202ENST00000393091 PANO1I0J062 215 aa8.38□□□□□ -1.07
USP44-202ENST00000393091 HSPG2P98160 4391 aa8.38□□□□□ -1.07
USP44-202ENST00000393091 MAJINQ3KP22 176 aa8.38□□□□□ -1.07
USP44-202ENST00000393091 C9orf116Q5BN46 136 aaPredicted RBP8.38□□□□□ -1.07
USP44-202ENST00000393091 KRTAP7-1Q8IUC3 87 aa8.38□□□□□ -1.07
USP44-202ENST00000393091 ATOH7Q8N100 152 aa8.38□□□□□ -1.07
USP44-202ENST00000393091 RYR1P21817 5038 aa8.37□□□□□ -1.07
USP44-202ENST00000393091 SND1-IT1Q9HBX3 110 aa8.37□□□□□ -1.07
USP44-202ENST00000393091 HIGD1BQ9P298 99 aa8.37□□□□□ -1.07
USP44-202ENST00000393091 FUSP35637 526 aaKnown RBP eCLIP8.36□□□□□ -1.07
USP44-202ENST00000393091 NDUFC2O95298 119 aa8.36□□□□□ -1.07
USP44-202ENST00000393091 ZNF815PA8K554 130 aa8.36□□□□□ -1.07
USP44-202ENST00000393091 VAMP8Q9BV40 100 aa8.36□□□□□ -1.07
USP44-202ENST00000393091 SMIM13P0DJ93 91 aa8.34□□□□□ -1.07
USP44-202ENST00000393091 PCP2Q8IVA1 136 aa8.34□□□□□ -1.07
USP44-202ENST00000393091 CIRBP-AS1Q8TBR5 109 aa8.34□□□□□ -1.07
USP44-202ENST00000393091 IFITM1P13164 125 aa8.34□□□□□ -1.07
USP44-202ENST00000393091 RPL18AQ02543 176 aaKnown RBP8.34□□□□□ -1.07
USP44-202ENST00000393091 LINC01620Q4KN68 170 aa8.34□□□□□ -1.07
USP44-202ENST00000393091 SPATA45Q537H7 98 aa8.34□□□□□ -1.07
USP44-202ENST00000393091 SCXQ7RTU7 201 aa8.34□□□□□ -1.07
USP44-202ENST00000393091 A0A087WYN8 130 aa8.33□□□□□ -1.08
USP44-202ENST00000393091 TMEM238C9JI98 176 aa8.33□□□□□ -1.08
USP44-202ENST00000393091 VPREB1P12018 145 aa8.33□□□□□ -1.08
USP44-202ENST00000393091 COPS9Q8WXC6 57 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms