RNA–Protein interactions for RNA: ENST00000392919.4

GNPTAB-202, Transcript of N-acetylglucosamine-1-phosphate transferase subunits alpha and beta, humanhuman

TSL 1 (best) BASIC

Gene GNPTAB, Length 760 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNPTAB-202ENST00000392919 PACRGQ96M98 296 aaPredicted RBP17.28■□□□□ 0.36
GNPTAB-202ENST00000392919 UNQ6190/PRO20217Q6UXQ8 127 aa17.27■□□□□ 0.36
GNPTAB-202ENST00000392919 MRPL35Q9NZE8 188 aaKnown RBP17.27■□□□□ 0.36
GNPTAB-202ENST00000392919 SMIM1B2RUZ4 78 aa17.26■□□□□ 0.35
GNPTAB-202ENST00000392919 NDUFA1O15239 70 aa17.26■□□□□ 0.35
GNPTAB-202ENST00000392919 RNF151Q2KHN1 245 aa17.26■□□□□ 0.35
GNPTAB-202ENST00000392919 J3QL48 77 aa17.25■□□□□ 0.35
GNPTAB-202ENST00000392919 SPACA4Q8TDM5 124 aa17.25■□□□□ 0.35
GNPTAB-202ENST00000392919 TOMM7Q9P0U1 55 aa17.25■□□□□ 0.35
GNPTAB-202ENST00000392919 A0A096LNI7 61 aa17.24■□□□□ 0.35
GNPTAB-202ENST00000392919 TRAV12-1A0A0B4J245 112 aa17.24■□□□□ 0.35
GNPTAB-202ENST00000392919 LEPROTL1O95214 131 aa17.24■□□□□ 0.35
GNPTAB-202ENST00000392919 Q8IZM0 81 aa17.24■□□□□ 0.35
GNPTAB-202ENST00000392919 ZNF22P17026 224 aaPredicted RBP17.23■□□□□ 0.35
GNPTAB-202ENST00000392919 C2orf82Q6UX34 121 aa17.23■□□□□ 0.35
GNPTAB-202ENST00000392919 C6orf48Q9UBA6 75 aa17.23■□□□□ 0.35
GNPTAB-202ENST00000392919 CHTOPQ9Y3Y2 248 aaKnown RBP17.23■□□□□ 0.35
GNPTAB-202ENST00000392919 IGKV2-24A0A0C4DH68 120 aa17.22■□□□□ 0.35
GNPTAB-202ENST00000392919 PRSS2P07478 247 aa17.22■□□□□ 0.35
GNPTAB-202ENST00000392919 SPINK8P0C7L1 97 aa17.22■□□□□ 0.35
GNPTAB-202ENST00000392919 PKIGQ9Y2B9 76 aa17.22■□□□□ 0.35
GNPTAB-202ENST00000392919 LOC107984640A0A0U1RRK4 108 aa17.21■□□□□ 0.35
GNPTAB-202ENST00000392919 C11orf86A6NJI1 115 aa17.21■□□□□ 0.35
GNPTAB-202ENST00000392919 KRTAP29-1A8MX34 341 aaPredicted RBP17.2■□□□□ 0.34
GNPTAB-202ENST00000392919 H3BRM9 83 aa17.2■□□□□ 0.34
GNPTAB-202ENST00000392919 C6orf226Q5I0X4 101 aa17.2■□□□□ 0.34
GNPTAB-202ENST00000392919 A0A087WYN8 130 aa17.19■□□□□ 0.34
GNPTAB-202ENST00000392919 FABP4P15090 132 aa17.19■□□□□ 0.34
GNPTAB-202ENST00000392919 MAJINQ3KP22 176 aa17.19■□□□□ 0.34
GNPTAB-202ENST00000392919 DPH3Q96FX2 82 aa17.19■□□□□ 0.34
GNPTAB-202ENST00000392919 HSPB8Q9UJY1 196 aa17.18■□□□□ 0.34
GNPTAB-202ENST00000392919 TRBV30A0A0K0K1B3 111 aa17.17■□□□□ 0.34
GNPTAB-202ENST00000392919 PTTG1IPP53801 180 aa17.17■□□□□ 0.34
GNPTAB-202ENST00000392919 GAGE2BQ13066 116 aa17.17■□□□□ 0.34
GNPTAB-202ENST00000392919 F8VRH5 84 aa17.16■□□□□ 0.34
GNPTAB-202ENST00000392919 CKS1BP61024 79 aa17.16■□□□□ 0.34
GNPTAB-202ENST00000392919 COX7B2Q8TF08 81 aa17.16■□□□□ 0.34
GNPTAB-202ENST00000392919 PLAC8Q9NZF1 115 aa17.16■□□□□ 0.34
GNPTAB-202ENST00000392919 RPL37AP61513 92 aaKnown RBP17.15■□□□□ 0.34
GNPTAB-202ENST00000392919 COA6Q5JTJ3 125 aaKnown RBP17.15■□□□□ 0.34
GNPTAB-202ENST00000392919 LINC00474Q9P2X8 69 aa17.15■□□□□ 0.34
GNPTAB-202ENST00000392919 IGLV5-39A0A0G2JS06 123 aa17.14■□□□□ 0.33
GNPTAB-202ENST00000392919 TLX1NBP0CAT3 122 aa17.14■□□□□ 0.33
GNPTAB-202ENST00000392919 RPL18AQ02543 176 aaKnown RBP17.14■□□□□ 0.33
GNPTAB-202ENST00000392919 ODF1Q14990 250 aa17.14■□□□□ 0.33
GNPTAB-202ENST00000392919 TMEM170BQ5T4T1 132 aa17.14■□□□□ 0.33
GNPTAB-202ENST00000392919 H0Y8G0 127 aa17.13■□□□□ 0.33
GNPTAB-202ENST00000392919 C9orf116Q5BN46 136 aaPredicted RBP17.13■□□□□ 0.33
GNPTAB-202ENST00000392919 LRP1Q07954 4544 aaKnown RBP17.13■□□□□ 0.33
GNPTAB-202ENST00000392919 CXCL5P42830 114 aa17.12■□□□□ 0.33
GNPTAB-202ENST00000392919 HNRNPA3P51991 378 aaKnown RBP17.12■□□□□ 0.33
GNPTAB-202ENST00000392919 STPG4Q8N801 248 aa17.12■□□□□ 0.33
GNPTAB-202ENST00000392919 Q6ZRP5 223 aa17.11■□□□□ 0.33
GNPTAB-202ENST00000392919 TMEM223A0PJW6 202 aa17.07■□□□□ 0.32
GNPTAB-202ENST00000392919 NDUFC2-KCTD14E9PQ53 114 aa17.06■□□□□ 0.32
GNPTAB-202ENST00000392919 MAP1LC3CQ9BXW4 147 aa17.06■□□□□ 0.32
GNPTAB-202ENST00000392919 A0A1W2PNN7 141 aa17.05■□□□□ 0.32
GNPTAB-202ENST00000392919 GAGE2EQ4V326 116 aa17.05■□□□□ 0.32
GNPTAB-202ENST00000392919 GAGE2DQ9UEU5 116 aa17.05■□□□□ 0.32
GNPTAB-202ENST00000392919 PMCHL2Q9BQD1 86 aa17.03■□□□□ 0.32
GNPTAB-202ENST00000392919 FAT3Q8TDW7 4589 aa17.02■□□□□ 0.32
GNPTAB-202ENST00000392919 OXTP01178 125 aa17.02■□□□□ 0.32
GNPTAB-202ENST00000392919 PKHD1L1Q86WI1 4243 aa17.01■□□□□ 0.31
GNPTAB-202ENST00000392919 SYS1-DBNDD2H3BUS1 97 aa17■□□□□ 0.31
GNPTAB-202ENST00000392919 PLNP26678 52 aa17■□□□□ 0.31
GNPTAB-202ENST00000392919 DPM2O94777 84 aa16.99■□□□□ 0.31
GNPTAB-202ENST00000392919 C9orf129Q5T035 196 aaKnown RBP16.98■□□□□ 0.31
GNPTAB-202ENST00000392919 FAM168BA1KXE4 195 aa16.96■□□□□ 0.31
GNPTAB-202ENST00000392919 IGKCP01834 107 aa16.96■□□□□ 0.31
GNPTAB-202ENST00000392919 ZNF625Q96I27 306 aaPredicted RBP16.95■□□□□ 0.3
GNPTAB-202ENST00000392919 KRTAP7-1Q8IUC3 87 aa16.94■□□□□ 0.3
GNPTAB-202ENST00000392919 C3orf79P0CE67 100 aa16.93■□□□□ 0.3
GNPTAB-202ENST00000392919 PET117Q6UWS5 81 aa16.93■□□□□ 0.3
GNPTAB-202ENST00000392919 C7orf33Q8WU49 177 aa16.93■□□□□ 0.3
GNPTAB-202ENST00000392919 XAGE1AQ9HD64 81 aa16.93■□□□□ 0.3
GNPTAB-202ENST00000392919 LINC01545Q5VT33 79 aa16.92■□□□□ 0.3
GNPTAB-202ENST00000392919 SFTA2Q6UW10 78 aa16.91■□□□□ 0.3
GNPTAB-202ENST00000392919 FAM19A5Q7Z5A7 132 aaPredicted RBP16.9■□□□□ 0.3
GNPTAB-202ENST00000392919 PHF5AQ7RTV0 110 aaKnown RBP16.89■□□□□ 0.29
GNPTAB-202ENST00000392919 ERG28Q9UKR5 140 aa16.89■□□□□ 0.29
GNPTAB-202ENST00000392919 PFN2P35080 140 aa16.88■□□□□ 0.29
GNPTAB-202ENST00000392919 KRTDAPP60985 99 aa16.88■□□□□ 0.29
GNPTAB-202ENST00000392919 HIST3H2BBQ8N257 126 aa16.88■□□□□ 0.29
GNPTAB-202ENST00000392919 LEPROTO15243 131 aa16.87■□□□□ 0.29
GNPTAB-202ENST00000392919 TSPEAR-AS2P59090 65 aa16.87■□□□□ 0.29
GNPTAB-202ENST00000392919 HERVK_113P61574 105 aa16.86■□□□□ 0.29
GNPTAB-202ENST00000392919 SERTAD4-AS1Q5TG53 156 aa16.85■□□□□ 0.29
GNPTAB-202ENST00000392919 PLEKHB2Q96CS7 222 aa16.85■□□□□ 0.29
GNPTAB-202ENST00000392919 COX17Q14061 63 aa16.84■□□□□ 0.29
GNPTAB-202ENST00000392919 NDUFA12Q9UI09 145 aa16.84■□□□□ 0.29
GNPTAB-202ENST00000392919 S100A6P06703 90 aa16.83■□□□□ 0.28
GNPTAB-202ENST00000392919 MT1HL1P0DM35 61 aa16.83■□□□□ 0.28
GNPTAB-202ENST00000392919 M0QXV9 152 aa16.82■□□□□ 0.28
GNPTAB-202ENST00000392919 J3QQQ9 107 aa16.81■□□□□ 0.28
GNPTAB-202ENST00000392919 PRR3P79522 188 aaKnown RBP16.81■□□□□ 0.28
GNPTAB-202ENST00000392919 HIST1H2BLQ99880 126 aa16.81■□□□□ 0.28
GNPTAB-202ENST00000392919 HERV-K104P63124 156 aa16.8■□□□□ 0.28
GNPTAB-202ENST00000392919 MYMXA0A1B0GTQ4 84 aa16.79■□□□□ 0.28
GNPTAB-202ENST00000392919 E9PLD3 99 aa16.79■□□□□ 0.28
GNPTAB-202ENST00000392919 SND1-IT1Q9HBX3 110 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms