RNA–Protein interactions for RNA: ENST00000392456.3

CCDC50-202, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CCDC50, Length 2,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-202ENST00000392456 MRPS36P82909 103 aaKnown RBP13.52□□□□□ -0.25
CCDC50-202ENST00000392456 MIAQ16674 131 aa13.52□□□□□ -0.25
CCDC50-202ENST00000392456 LYPD5Q6UWN5 251 aa13.52□□□□□ -0.25
CCDC50-202ENST00000392456 C20orf197Q8N268 126 aa13.52□□□□□ -0.25
CCDC50-202ENST00000392456 IGHV3OR16-12A0A075B7B8 117 aa13.51□□□□□ -0.25
CCDC50-202ENST00000392456 RPL39P62891 51 aaKnown RBP13.51□□□□□ -0.25
CCDC50-202ENST00000392456 MED14OSP0DP75 135 aa13.51□□□□□ -0.25
CCDC50-202ENST00000392456 ANK2Q01484 3957 aa13.5□□□□□ -0.25
CCDC50-202ENST00000392456 GHRHP01286 108 aa13.5□□□□□ -0.25
CCDC50-202ENST00000392456 CMC4P56277 68 aaPredicted RBP13.5□□□□□ -0.25
CCDC50-202ENST00000392456 NOTCH1P46531 2555 aa13.49□□□□□ -0.25
CCDC50-202ENST00000392456 INSP01308 110 aa13.49□□□□□ -0.25
CCDC50-202ENST00000392456 MGPP08493 103 aa13.49□□□□□ -0.25
CCDC50-202ENST00000392456 PPP1R17O96001 155 aa13.49□□□□□ -0.25
CCDC50-202ENST00000392456 LINC00474Q9P2X8 69 aa13.49□□□□□ -0.25
CCDC50-202ENST00000392456 NXPH4O95158 308 aa13.48□□□□□ -0.25
CCDC50-202ENST00000392456 PMAIP1Q13794 54 aa13.48□□□□□ -0.25
CCDC50-202ENST00000392456 OXLD1Q5BKU9 147 aa13.47□□□□□ -0.25
CCDC50-202ENST00000392456 LINC00846Q9NV44 126 aa13.47□□□□□ -0.25
CCDC50-202ENST00000392456 A0A087WWL8 130 aa13.47□□□□□ -0.25
CCDC50-202ENST00000392456 KIF25-AS1Q9Y6Z4 181 aa13.46□□□□□ -0.25
CCDC50-202ENST00000392456 LINC00315P59091 139 aa13.46□□□□□ -0.26
CCDC50-202ENST00000392456 C11orf72Q8NBR9 251 aa13.46□□□□□ -0.26
CCDC50-202ENST00000392456 DNAL4O96015 105 aa13.45□□□□□ -0.26
CCDC50-202ENST00000392456 IGHV3-30-3P0DP02 117 aa13.45□□□□□ -0.26
CCDC50-202ENST00000392456 SS18Q15532 418 aa13.45□□□□□ -0.26
CCDC50-202ENST00000392456 CSNK1G2-AS1Q8NCQ2 148 aa13.45□□□□□ -0.26
CCDC50-202ENST00000392456 RETNQ9HD89 108 aa13.45□□□□□ -0.26
CCDC50-202ENST00000392456 NBEAL1Q6ZS30 2694 aa13.44□□□□□ -0.26
CCDC50-202ENST00000392456 COPS9Q8WXC6 57 aa13.44□□□□□ -0.26
CCDC50-202ENST00000392456 VSIG2Q96IQ7 327 aa13.42□□□□□ -0.26
CCDC50-202ENST00000392456 RPL28P46779 137 aaKnown RBP13.42□□□□□ -0.26
CCDC50-202ENST00000392456 FAM74A4Q5TZK3 123 aa13.42□□□□□ -0.26
CCDC50-202ENST00000392456 POLR2KP53803 58 aaKnown RBP13.41□□□□□ -0.26
CCDC50-202ENST00000392456 DEFB104AQ8WTQ1 72 aa13.41□□□□□ -0.26
CCDC50-202ENST00000392456 LINC00467Q9BRT7 94 aa13.41□□□□□ -0.26
CCDC50-202ENST00000392456 TRBV7-6A0A0J9YX20 115 aa13.4□□□□□ -0.26
CCDC50-202ENST00000392456 CCKP06307 115 aa13.4□□□□□ -0.26
CCDC50-202ENST00000392456 MGAM2Q2M2H8 2515 aa13.4□□□□□ -0.26
CCDC50-202ENST00000392456 ZNF561-AS1K7EIQ3 104 aa13.39□□□□□ -0.27
CCDC50-202ENST00000392456 KRTAP10-11P60412 298 aa13.39□□□□□ -0.27
CCDC50-202ENST00000392456 OPRPNQ99935 248 aaPredicted RBP13.39□□□□□ -0.27
CCDC50-202ENST00000392456 IGHV3-73A0A0B4J1V6 119 aa13.38□□□□□ -0.27
CCDC50-202ENST00000392456 A0A0J9YXV3 536 aa13.38□□□□□ -0.27
CCDC50-202ENST00000392456 NDUFA12Q9UI09 145 aa13.38□□□□□ -0.27
CCDC50-202ENST00000392456 TRAV23DV6A0A075B6W5 121 aa13.38□□□□□ -0.27
CCDC50-202ENST00000392456 VCYO14598 125 aa13.38□□□□□ -0.27
CCDC50-202ENST00000392456 TIMM17BO60830 172 aa13.38□□□□□ -0.27
CCDC50-202ENST00000392456 FAM218AQ96MZ4 157 aa13.37□□□□□ -0.27
CCDC50-202ENST00000392456 CD164Q04900 197 aa13.37□□□□□ -0.27
CCDC50-202ENST00000392456 KLKP1Q107X0 134 aa13.37□□□□□ -0.27
CCDC50-202ENST00000392456 TRBV27A0A0K0K1C4 114 aa13.36□□□□□ -0.27
CCDC50-202ENST00000392456 F5H697 171 aa13.36□□□□□ -0.27
CCDC50-202ENST00000392456 SUMO4Q6EEV6 95 aa13.36□□□□□ -0.27
CCDC50-202ENST00000392456 PLAC8L1A1L4L8 177 aa13.36□□□□□ -0.27
CCDC50-202ENST00000392456 C14orf132Q9NPU4 83 aa13.36□□□□□ -0.27
CCDC50-202ENST00000392456 MDFIQ99750 246 aa13.35□□□□□ -0.27
CCDC50-202ENST00000392456 DNAH3Q8TD57 4116 aa13.35□□□□□ -0.27
CCDC50-202ENST00000392456 RBM3P98179 157 aaKnown RBP13.34□□□□□ -0.27
CCDC50-202ENST00000392456 C9orf129Q5T035 196 aaKnown RBP13.34□□□□□ -0.27
CCDC50-202ENST00000392456 Q9UF83 564 aa13.34□□□□□ -0.27
CCDC50-202ENST00000392456 Q6ZSN1 163 aa13.33□□□□□ -0.28
CCDC50-202ENST00000392456 OBSCN-AS1Q96MR7 158 aa13.33□□□□□ -0.28
CCDC50-202ENST00000392456 NOP10Q9NPE3 64 aaKnown RBP13.33□□□□□ -0.28
CCDC50-202ENST00000392456 Q6ZRU5 148 aa13.33□□□□□ -0.28
CCDC50-202ENST00000392456 Q6ZTI0 123 aa13.33□□□□□ -0.28
CCDC50-202ENST00000392456 PRR15Q8IV56 129 aa13.33□□□□□ -0.28
CCDC50-202ENST00000392456 IGHV1-58A0A0C4DH39 117 aa13.32□□□□□ -0.28
CCDC50-202ENST00000392456 IGHV4-30-4P0DP06 118 aa13.32□□□□□ -0.28
CCDC50-202ENST00000392456 TRGV1A0A0A0MS02 117 aa13.32□□□□□ -0.28
CCDC50-202ENST00000392456 Q9HAA7 133 aa13.32□□□□□ -0.28
CCDC50-202ENST00000392456 M0QY20 66 aa13.31□□□□□ -0.28
CCDC50-202ENST00000392456 TRAV7A0A075B6U4 112 aa13.31□□□□□ -0.28
CCDC50-202ENST00000392456 TRBV6-5A0A0K0K1A5 114 aa13.3□□□□□ -0.28
CCDC50-202ENST00000392456 DEFB135Q30KP9 77 aa13.3□□□□□ -0.28
CCDC50-202ENST00000392456 F8WEM9 126 aa13.3□□□□□ -0.28
CCDC50-202ENST00000392456 X6R8D5 127 aa13.29□□□□□ -0.28
CCDC50-202ENST00000392456 BCE1O60756 84 aa13.29□□□□□ -0.28
CCDC50-202ENST00000392456 EGFEM1PQ0D2K5 195 aa13.29□□□□□ -0.28
CCDC50-202ENST00000392456 ATP5EP2Q5VTU8 51 aa13.29□□□□□ -0.28
CCDC50-202ENST00000392456 C16orf74Q96GX8 76 aa13.28□□□□□ -0.28
CCDC50-202ENST00000392456 IGLV4-3A0A075B6K6 122 aa13.27□□□□□ -0.29
CCDC50-202ENST00000392456 IGHV3-53P01767 116 aa13.27□□□□□ -0.29
CCDC50-202ENST00000392456 ATP5EP56381 51 aaPredicted RBP13.27□□□□□ -0.29
CCDC50-202ENST00000392456 PIK3CD-AS1Q5SR53 167 aa13.27□□□□□ -0.29
CCDC50-202ENST00000392456 RMI2Q96E14 147 aa13.27□□□□□ -0.29
CCDC50-202ENST00000392456 LINC00308Q8TCZ7 52 aa13.26□□□□□ -0.29
CCDC50-202ENST00000392456 A8MZ25 164 aa13.25□□□□□ -0.29
CCDC50-202ENST00000392456 DEFB4AO15263 64 aa13.25□□□□□ -0.29
CCDC50-202ENST00000392456 MPLKIPQ8TAP9 179 aa13.25□□□□□ -0.29
CCDC50-202ENST00000392456 FAM229BQ4G0N7 80 aa13.24□□□□□ -0.29
CCDC50-202ENST00000392456 SNURFQ9Y675 71 aa13.24□□□□□ -0.29
CCDC50-202ENST00000392456 TENM3Q9P273 2699 aa13.24□□□□□ -0.29
CCDC50-202ENST00000392456 PRB2P02812 416 aaPredicted RBP13.23□□□□□ -0.29
CCDC50-202ENST00000392456 APOC4P55056 127 aa13.23□□□□□ -0.29
CCDC50-202ENST00000392456 S100A7L2Q5SY68 101 aa13.23□□□□□ -0.29
CCDC50-202ENST00000392456 OVOL2Q9BRP0 275 aa13.23□□□□□ -0.29
CCDC50-202ENST00000392456 C20orf203Q8NBC4 194 aa13.23□□□□□ -0.29
CCDC50-202ENST00000392456 PAX4O43316 350 aa13.22□□□□□ -0.29
CCDC50-202ENST00000392456 ENHOQ6UWT2 76 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms