RNA–Protein interactions for RNA: ENST00000390627.3

IGHV3-53-201, Transcript of immunoglobulin heavy variable 3-53, humanhuman

APPRIS P1 BASIC

Gene IGHV3-53, Length 571 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-53-201ENST00000390627 CHTOPQ9Y3Y2 248 aaKnown RBP9.57□□□□□ -0.88
IGHV3-53-201ENST00000390627 HIST1H2BKO60814 126 aa9.56□□□□□ -0.88
IGHV3-53-201ENST00000390627 HIST1H2BJP06899 126 aa9.56□□□□□ -0.88
IGHV3-53-201ENST00000390627 HIST1H2BOP23527 126 aa9.56□□□□□ -0.88
IGHV3-53-201ENST00000390627 HIST1H2BBP33778 126 aa9.56□□□□□ -0.88
IGHV3-53-201ENST00000390627 CXCL5P42830 114 aa9.56□□□□□ -0.88
IGHV3-53-201ENST00000390627 PTTG1IPP53801 180 aa9.56□□□□□ -0.88
IGHV3-53-201ENST00000390627 HIST1H2BDP58876 126 aa9.56□□□□□ -0.88
IGHV3-53-201ENST00000390627 HIST1H2BCP62807 126 aa9.56□□□□□ -0.88
IGHV3-53-201ENST00000390627 RPL18AQ02543 176 aaKnown RBP9.56□□□□□ -0.88
IGHV3-53-201ENST00000390627 GAGE2BQ13066 116 aa9.56□□□□□ -0.88
IGHV3-53-201ENST00000390627 HIST2H2BEQ16778 126 aa9.56□□□□□ -0.88
IGHV3-53-201ENST00000390627 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.56□□□□□ -0.88
IGHV3-53-201ENST00000390627 C10orf25Q5T742 122 aa9.56□□□□□ -0.88
IGHV3-53-201ENST00000390627 HIST1H2BHQ93079 126 aa9.56□□□□□ -0.88
IGHV3-53-201ENST00000390627 HIST1H2BNQ99877 126 aa9.56□□□□□ -0.88
IGHV3-53-201ENST00000390627 HIST1H2BMQ99879 126 aa9.56□□□□□ -0.88
IGHV3-53-201ENST00000390627 C6orf48Q9UBA6 75 aa9.56□□□□□ -0.88
IGHV3-53-201ENST00000390627 SPINK8P0C7L1 97 aa9.55□□□□□ -0.88
IGHV3-53-201ENST00000390627 ZNF22P17026 224 aaPredicted RBP9.55□□□□□ -0.88
IGHV3-53-201ENST00000390627 C2orf82Q6UX34 121 aa9.55□□□□□ -0.88
IGHV3-53-201ENST00000390627 KRTAP4-5Q9BYR2 181 aa9.55□□□□□ -0.88
IGHV3-53-201ENST00000390627 PLAC8Q9NZF1 115 aa9.55□□□□□ -0.88
IGHV3-53-201ENST00000390627 HSPB8Q9UJY1 196 aa9.55□□□□□ -0.88
IGHV3-53-201ENST00000390627 C11orf86A6NJI1 115 aa9.54□□□□□ -0.88
IGHV3-53-201ENST00000390627 NUPR1O60356 82 aa9.54□□□□□ -0.88
IGHV3-53-201ENST00000390627 PLA2G1BP04054 148 aaKnown RBP9.54□□□□□ -0.88
IGHV3-53-201ENST00000390627 TLX1NBP0CAT3 122 aa9.54□□□□□ -0.88
IGHV3-53-201ENST00000390627 STPG4Q8N801 248 aa9.54□□□□□ -0.88
IGHV3-53-201ENST00000390627 COX7B2Q8TF08 81 aa9.54□□□□□ -0.88
IGHV3-53-201ENST00000390627 F8VRH5 84 aa9.53□□□□□ -0.88
IGHV3-53-201ENST00000390627 TMEM170BQ5T4T1 132 aa9.53□□□□□ -0.88
IGHV3-53-201ENST00000390627 H0Y8G0 127 aa9.51□□□□□ -0.89
IGHV3-53-201ENST00000390627 FABP4P15090 132 aa9.51□□□□□ -0.89
IGHV3-53-201ENST00000390627 IGLV5-39A0A0G2JS06 123 aa9.5□□□□□ -0.89
IGHV3-53-201ENST00000390627 NDUFC2-KCTD14E9PQ53 114 aa9.5□□□□□ -0.89
IGHV3-53-201ENST00000390627 Q6ZRP5 223 aa9.5□□□□□ -0.89
IGHV3-53-201ENST00000390627 ODF1Q14990 250 aa9.49□□□□□ -0.89
IGHV3-53-201ENST00000390627 C7orf33Q8WU49 177 aa9.49□□□□□ -0.89
IGHV3-53-201ENST00000390627 VPS13BQ7Z7G8 4022 aa9.48□□□□□ -0.89
IGHV3-53-201ENST00000390627 RPL37AP61513 92 aaKnown RBP9.48□□□□□ -0.89
IGHV3-53-201ENST00000390627 GAGE2EQ4V326 116 aa9.48□□□□□ -0.89
IGHV3-53-201ENST00000390627 C9orf116Q5BN46 136 aaPredicted RBP9.48□□□□□ -0.89
IGHV3-53-201ENST00000390627 MAP1LC3CQ9BXW4 147 aa9.48□□□□□ -0.89
IGHV3-53-201ENST00000390627 GAGE2DQ9UEU5 116 aa9.48□□□□□ -0.89
IGHV3-53-201ENST00000390627 COA6Q5JTJ3 125 aaKnown RBP9.47□□□□□ -0.89
IGHV3-53-201ENST00000390627 TMEM223A0PJW6 202 aa9.46□□□□□ -0.9
IGHV3-53-201ENST00000390627 PLNP26678 52 aa9.46□□□□□ -0.9
IGHV3-53-201ENST00000390627 SFTA2Q6UW10 78 aa9.46□□□□□ -0.9
IGHV3-53-201ENST00000390627 ABCA13Q86UQ4 5058 aa9.46□□□□□ -0.9
IGHV3-53-201ENST00000390627 A0A1W2PNN7 141 aa9.45□□□□□ -0.9
IGHV3-53-201ENST00000390627 INAFM2P0DMQ5 153 aa9.45□□□□□ -0.9
IGHV3-53-201ENST00000390627 DPM2O94777 84 aa9.43□□□□□ -0.9
IGHV3-53-201ENST00000390627 IGKCP01834 107 aa9.42□□□□□ -0.9
IGHV3-53-201ENST00000390627 KRTAP10-4P60372 401 aaPredicted RBP9.42□□□□□ -0.9
IGHV3-53-201ENST00000390627 PCLOQ9Y6V0 5065 aa9.42□□□□□ -0.9
IGHV3-53-201ENST00000390627 SYS1-DBNDD2H3BUS1 97 aa9.41□□□□□ -0.9
IGHV3-53-201ENST00000390627 C9orf129Q5T035 196 aaKnown RBP9.41□□□□□ -0.9
IGHV3-53-201ENST00000390627 FAM19A5Q7Z5A7 132 aaPredicted RBP9.41□□□□□ -0.9
IGHV3-53-201ENST00000390627 PMCHL2Q9BQD1 86 aa9.41□□□□□ -0.9
IGHV3-53-201ENST00000390627 FAM168BA1KXE4 195 aa9.4□□□□□ -0.9
IGHV3-53-201ENST00000390627 HERVK_113P61574 105 aa9.4□□□□□ -0.9
IGHV3-53-201ENST00000390627 XAGE1AQ9HD64 81 aa9.4□□□□□ -0.9
IGHV3-53-201ENST00000390627 ERG28Q9UKR5 140 aa9.4□□□□□ -0.9
IGHV3-53-201ENST00000390627 COX17Q14061 63 aa9.39□□□□□ -0.91
IGHV3-53-201ENST00000390627 ZNF625Q96I27 306 aaPredicted RBP9.39□□□□□ -0.91
IGHV3-53-201ENST00000390627 M0QXV9 152 aa9.38□□□□□ -0.91
IGHV3-53-201ENST00000390627 PFN2P35080 140 aa9.38□□□□□ -0.91
IGHV3-53-201ENST00000390627 PET117Q6UWS5 81 aa9.38□□□□□ -0.91
IGHV3-53-201ENST00000390627 PHF5AQ7RTV0 110 aaKnown RBP9.38□□□□□ -0.91
IGHV3-53-201ENST00000390627 PLEKHB2Q96CS7 222 aa9.38□□□□□ -0.91
IGHV3-53-201ENST00000390627 PRR3P79522 188 aaKnown RBP9.37□□□□□ -0.91
IGHV3-53-201ENST00000390627 LEPROTO15243 131 aa9.36□□□□□ -0.91
IGHV3-53-201ENST00000390627 C3orf79P0CE67 100 aa9.36□□□□□ -0.91
IGHV3-53-201ENST00000390627 HERV-K104P63124 156 aa9.36□□□□□ -0.91
IGHV3-53-201ENST00000390627 LINC01545Q5VT33 79 aa9.36□□□□□ -0.91
IGHV3-53-201ENST00000390627 MYMXA0A1B0GTQ4 84 aa9.35□□□□□ -0.91
IGHV3-53-201ENST00000390627 KRTDAPP60985 99 aa9.35□□□□□ -0.91
IGHV3-53-201ENST00000390627 SERTAD4-AS1Q5TG53 156 aa9.35□□□□□ -0.91
IGHV3-53-201ENST00000390627 KRTAP7-1Q8IUC3 87 aa9.35□□□□□ -0.91
IGHV3-53-201ENST00000390627 NDUFA12Q9UI09 145 aa9.35□□□□□ -0.91
IGHV3-53-201ENST00000390627 LINC00587B1AMM8 73 aa9.34□□□□□ -0.91
IGHV3-53-201ENST00000390627 S100A6P06703 90 aa9.34□□□□□ -0.91
IGHV3-53-201ENST00000390627 PLA2G2DQ9UNK4 145 aa9.34□□□□□ -0.91
IGHV3-53-201ENST00000390627 C20orf202A1L168 122 aa9.33□□□□□ -0.92
IGHV3-53-201ENST00000390627 J3QQQ9 107 aa9.33□□□□□ -0.92
IGHV3-53-201ENST00000390627 LGALS3P17931 250 aaKnown RBP9.33□□□□□ -0.92
IGHV3-53-201ENST00000390627 S100A2P29034 98 aa9.33□□□□□ -0.92
IGHV3-53-201ENST00000390627 LINC00158P58513 81 aa9.33□□□□□ -0.92
IGHV3-53-201ENST00000390627 UBE2BP63146 152 aa9.33□□□□□ -0.92
IGHV3-53-201ENST00000390627 MEIG1Q5JSS6 88 aa9.33□□□□□ -0.92
IGHV3-53-201ENST00000390627 SND1-IT1Q9HBX3 110 aa9.33□□□□□ -0.92
IGHV3-53-201ENST00000390627 TP73-AS1Q9UF72 201 aa9.33□□□□□ -0.92
IGHV3-53-201ENST00000390627 PKHD1L1Q86WI1 4243 aa9.32□□□□□ -0.92
IGHV3-53-201ENST00000390627 SRRM2Q9UQ35 2752 aaKnown RBP9.32□□□□□ -0.92
IGHV3-53-201ENST00000390627 E9PLD3 99 aa9.32□□□□□ -0.92
IGHV3-53-201ENST00000390627 NMUP48645 174 aa9.32□□□□□ -0.92
IGHV3-53-201ENST00000390627 HNRNPA3P51991 378 aaKnown RBP9.32□□□□□ -0.92
IGHV3-53-201ENST00000390627 TSPEAR-AS2P59090 65 aa9.32□□□□□ -0.92
IGHV3-53-201ENST00000390627 LBHQ53QV2 105 aaPredicted RBP9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms