RNA–Protein interactions for RNA: ENST00000381029.4

VCX3B-201, Transcript of variable charge X-linked 3B, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3B, Length 756 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3B-201ENST00000381029 HIST1H2BOP23527 126 aa9.32□□□□□ -0.92
VCX3B-201ENST00000381029 HIST1H2BBP33778 126 aa9.32□□□□□ -0.92
VCX3B-201ENST00000381029 HIST1H2BDP58876 126 aa9.32□□□□□ -0.92
VCX3B-201ENST00000381029 HIST1H2BCP62807 126 aa9.32□□□□□ -0.92
VCX3B-201ENST00000381029 HIST2H2BEQ16778 126 aa9.32□□□□□ -0.92
VCX3B-201ENST00000381029 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.32□□□□□ -0.92
VCX3B-201ENST00000381029 HIST1H2BHQ93079 126 aa9.32□□□□□ -0.92
VCX3B-201ENST00000381029 HIST1H2BNQ99877 126 aa9.32□□□□□ -0.92
VCX3B-201ENST00000381029 HIST1H2BMQ99879 126 aa9.32□□□□□ -0.92
VCX3B-201ENST00000381029 IGLV5-39A0A0G2JS06 123 aa9.31□□□□□ -0.92
VCX3B-201ENST00000381029 TRBV30A0A0K0K1B3 111 aa9.31□□□□□ -0.92
VCX3B-201ENST00000381029 ZNF22P17026 224 aaPredicted RBP9.31□□□□□ -0.92
VCX3B-201ENST00000381029 MAJINQ3KP22 176 aa9.31□□□□□ -0.92
VCX3B-201ENST00000381029 IFI27L1Q96BM0 104 aa9.31□□□□□ -0.92
VCX3B-201ENST00000381029 PKIGQ9Y2B9 76 aa9.31□□□□□ -0.92
VCX3B-201ENST00000381029 MYCBP2O75592 4640 aa9.31□□□□□ -0.92
VCX3B-201ENST00000381029 TRAV12-1A0A0B4J245 112 aa9.3□□□□□ -0.92
VCX3B-201ENST00000381029 C11orf86A6NJI1 115 aa9.3□□□□□ -0.92
VCX3B-201ENST00000381029 LINC00474Q9P2X8 69 aa9.3□□□□□ -0.92
VCX3B-201ENST00000381029 FLG2Q5D862 2391 aaPredicted RBP9.3□□□□□ -0.92
VCX3B-201ENST00000381029 A0A1W2PNN7 141 aa9.29□□□□□ -0.92
VCX3B-201ENST00000381029 SPINK8P0C7L1 97 aa9.29□□□□□ -0.92
VCX3B-201ENST00000381029 Q6ZRP5 223 aa9.29□□□□□ -0.92
VCX3B-201ENST00000381029 STPG4Q8N801 248 aa9.29□□□□□ -0.92
VCX3B-201ENST00000381029 NDUFA6P56556 154 aa9.28□□□□□ -0.92
VCX3B-201ENST00000381029 GAGE2BQ13066 116 aa9.28□□□□□ -0.92
VCX3B-201ENST00000381029 C9orf116Q5BN46 136 aaPredicted RBP9.28□□□□□ -0.92
VCX3B-201ENST00000381029 PACRGQ96M98 296 aaPredicted RBP9.28□□□□□ -0.92
VCX3B-201ENST00000381029 TOMM7Q9P0U1 55 aa9.28□□□□□ -0.92
VCX3B-201ENST00000381029 PKHD1L1Q86WI1 4243 aa9.27□□□□□ -0.92
VCX3B-201ENST00000381029 C6orf226Q5I0X4 101 aa9.27□□□□□ -0.93
VCX3B-201ENST00000381029 KRTAP7-1Q8IUC3 87 aa9.27□□□□□ -0.93
VCX3B-201ENST00000381029 CHTOPQ9Y3Y2 248 aaKnown RBP9.27□□□□□ -0.93
VCX3B-201ENST00000381029 PLA2G1BP04054 148 aaKnown RBP9.26□□□□□ -0.93
VCX3B-201ENST00000381029 PRSS2P07478 247 aa9.26□□□□□ -0.93
VCX3B-201ENST00000381029 RPL18AQ02543 176 aaKnown RBP9.26□□□□□ -0.93
VCX3B-201ENST00000381029 ODF1Q14990 250 aa9.26□□□□□ -0.93
VCX3B-201ENST00000381029 COX7B2Q8TF08 81 aa9.26□□□□□ -0.93
VCX3B-201ENST00000381029 NDUFC2-KCTD14E9PQ53 114 aa9.25□□□□□ -0.93
VCX3B-201ENST00000381029 F8VRH5 84 aa9.25□□□□□ -0.93
VCX3B-201ENST00000381029 H3BRM9 83 aa9.25□□□□□ -0.93
VCX3B-201ENST00000381029 LEPROTL1O95214 131 aa9.25□□□□□ -0.93
VCX3B-201ENST00000381029 INAFM2P0DMQ5 153 aa9.25□□□□□ -0.93
VCX3B-201ENST00000381029 CXCL5P42830 114 aa9.25□□□□□ -0.93
VCX3B-201ENST00000381029 COA6Q5JTJ3 125 aaKnown RBP9.25□□□□□ -0.93
VCX3B-201ENST00000381029 DPH3Q96FX2 82 aa9.25□□□□□ -0.93
VCX3B-201ENST00000381029 HNRNPA3P51991 378 aaKnown RBP9.24□□□□□ -0.93
VCX3B-201ENST00000381029 CKS1BP61024 79 aa9.24□□□□□ -0.93
VCX3B-201ENST00000381029 RPL37AP61513 92 aaKnown RBP9.23□□□□□ -0.93
VCX3B-201ENST00000381029 C9orf129Q5T035 196 aaKnown RBP9.23□□□□□ -0.93
VCX3B-201ENST00000381029 LRP1Q07954 4544 aaKnown RBP9.22□□□□□ -0.93
VCX3B-201ENST00000381029 TMEM223A0PJW6 202 aa9.22□□□□□ -0.93
VCX3B-201ENST00000381029 FAM168BA1KXE4 195 aa9.22□□□□□ -0.93
VCX3B-201ENST00000381029 FABP4P15090 132 aa9.21□□□□□ -0.94
VCX3B-201ENST00000381029 GAGE2EQ4V326 116 aa9.21□□□□□ -0.94
VCX3B-201ENST00000381029 TMEM170BQ5T4T1 132 aa9.21□□□□□ -0.94
VCX3B-201ENST00000381029 GAGE2DQ9UEU5 116 aa9.21□□□□□ -0.94
VCX3B-201ENST00000381029 HSPB8Q9UJY1 196 aa9.21□□□□□ -0.94
VCX3B-201ENST00000381029 ZNF625Q96I27 306 aaPredicted RBP9.2□□□□□ -0.94
VCX3B-201ENST00000381029 FAT3Q8TDW7 4589 aa9.2□□□□□ -0.94
VCX3B-201ENST00000381029 DMBT1Q9UGM3 2413 aaPredicted RBP9.19□□□□□ -0.94
VCX3B-201ENST00000381029 PRR3P79522 188 aaKnown RBP9.18□□□□□ -0.94
VCX3B-201ENST00000381029 C7orf33Q8WU49 177 aa9.18□□□□□ -0.94
VCX3B-201ENST00000381029 PHF5AQ7RTV0 110 aaKnown RBP9.17□□□□□ -0.94
VCX3B-201ENST00000381029 KRTAP11-1Q8IUC1 163 aa9.17□□□□□ -0.94
VCX3B-201ENST00000381029 SERTAD4-AS1Q5TG53 156 aa9.16□□□□□ -0.94
VCX3B-201ENST00000381029 XAGE1AQ9HD64 81 aa9.16□□□□□ -0.94
VCX3B-201ENST00000381029 H0Y8G0 127 aa9.15□□□□□ -0.94
VCX3B-201ENST00000381029 SYS1-DBNDD2H3BUS1 97 aa9.14□□□□□ -0.95
VCX3B-201ENST00000381029 S100A6P06703 90 aa9.14□□□□□ -0.95
VCX3B-201ENST00000381029 PLNP26678 52 aa9.14□□□□□ -0.95
VCX3B-201ENST00000381029 FAM19A5Q7Z5A7 132 aaPredicted RBP9.14□□□□□ -0.95
VCX3B-201ENST00000381029 PMCHL2Q9BQD1 86 aa9.14□□□□□ -0.95
VCX3B-201ENST00000381029 MAP1LC3CQ9BXW4 147 aa9.14□□□□□ -0.95
VCX3B-201ENST00000381029 DPM2O94777 84 aa9.13□□□□□ -0.95
VCX3B-201ENST00000381029 TSPEAR-AS2P59090 65 aa9.13□□□□□ -0.95
VCX3B-201ENST00000381029 PLA2G2DQ9UNK4 145 aa9.13□□□□□ -0.95
VCX3B-201ENST00000381029 IGKCP01834 107 aa9.12□□□□□ -0.95
VCX3B-201ENST00000381029 SRSF9Q13242 221 aaKnown RBP eCLIP9.12□□□□□ -0.95
VCX3B-201ENST00000381029 COX17Q14061 63 aa9.12□□□□□ -0.95
VCX3B-201ENST00000381029 LINC01545Q5VT33 79 aa9.12□□□□□ -0.95
VCX3B-201ENST00000381029 SFTA2Q6UW10 78 aa9.12□□□□□ -0.95
VCX3B-201ENST00000381029 PSORS1C2Q9UIG4 136 aa9.12□□□□□ -0.95
VCX3B-201ENST00000381029 ERG28Q9UKR5 140 aa9.12□□□□□ -0.95
VCX3B-201ENST00000381029 M0QXV9 152 aa9.11□□□□□ -0.95
VCX3B-201ENST00000381029 C3orf79P0CE67 100 aa9.11□□□□□ -0.95
VCX3B-201ENST00000381029 IGLV5-37A0A075B6J1 123 aa9.1□□□□□ -0.95
VCX3B-201ENST00000381029 KRTAP29-1A8MX34 341 aaPredicted RBP9.1□□□□□ -0.95
VCX3B-201ENST00000381029 PET117Q6UWS5 81 aa9.1□□□□□ -0.95
VCX3B-201ENST00000381029 HIST3H2BBQ8N257 126 aa9.1□□□□□ -0.95
VCX3B-201ENST00000381029 C22orf24Q9Y442 160 aa9.1□□□□□ -0.95
VCX3B-201ENST00000381029 LEPROTO15243 131 aa9.09□□□□□ -0.95
VCX3B-201ENST00000381029 PFN2P35080 140 aa9.09□□□□□ -0.95
VCX3B-201ENST00000381029 Q8NDZ9 215 aa9.09□□□□□ -0.95
VCX3B-201ENST00000381029 SND1-IT1Q9HBX3 110 aa9.09□□□□□ -0.95
VCX3B-201ENST00000381029 TP73-AS1Q9UF72 201 aa9.09□□□□□ -0.95
VCX3B-201ENST00000381029 S100A2P29034 98 aa9.08□□□□□ -0.96
VCX3B-201ENST00000381029 SNRPEP62304 92 aaKnown RBP9.08□□□□□ -0.96
VCX3B-201ENST00000381029 NDUFA12Q9UI09 145 aa9.08□□□□□ -0.96
VCX3B-201ENST00000381029 C5orf52A6NGY3 159 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms