RNA–Protein interactions for RNA: ENST00000378183.8

TRIM13-203, Transcript of tripartite motif containing 13, humanhuman

TSL 2

Gene TRIM13, Length 1,251 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-203ENST00000378183 PACRGQ96M98 296 aaPredicted RBP12.96□□□□□ -0.33
TRIM13-203ENST00000378183 TOMM7Q9P0U1 55 aa12.96□□□□□ -0.33
TRIM13-203ENST00000378183 NUPR1O60356 82 aa12.95□□□□□ -0.34
TRIM13-203ENST00000378183 LINC00474Q9P2X8 69 aa12.95□□□□□ -0.34
TRIM13-203ENST00000378183 PLA2G1BP04054 148 aaKnown RBP12.94□□□□□ -0.34
TRIM13-203ENST00000378183 PRSS2P07478 247 aa12.94□□□□□ -0.34
TRIM13-203ENST00000378183 SPINK8P0C7L1 97 aa12.93□□□□□ -0.34
TRIM13-203ENST00000378183 INAFM2P0DMQ5 153 aa12.93□□□□□ -0.34
TRIM13-203ENST00000378183 C6orf226Q5I0X4 101 aa12.93□□□□□ -0.34
TRIM13-203ENST00000378183 IFI27L1Q96BM0 104 aa12.93□□□□□ -0.34
TRIM13-203ENST00000378183 TRBV30A0A0K0K1B3 111 aa12.92□□□□□ -0.34
TRIM13-203ENST00000378183 TLX1NBP0CAT3 122 aa12.92□□□□□ -0.34
TRIM13-203ENST00000378183 RPL18AQ02543 176 aaKnown RBP12.92□□□□□ -0.34
TRIM13-203ENST00000378183 ZNF22P17026 224 aaPredicted RBP12.91□□□□□ -0.34
TRIM13-203ENST00000378183 C9orf116Q5BN46 136 aaPredicted RBP12.91□□□□□ -0.34
TRIM13-203ENST00000378183 Q6ZRP5 223 aa12.91□□□□□ -0.34
TRIM13-203ENST00000378183 C11orf86A6NJI1 115 aa12.9□□□□□ -0.34
TRIM13-203ENST00000378183 CKS1BP61024 79 aa12.9□□□□□ -0.34
TRIM13-203ENST00000378183 TRAV12-1A0A0B4J245 112 aa12.89□□□□□ -0.35
TRIM13-203ENST00000378183 A0A1W2PNN7 141 aa12.89□□□□□ -0.35
TRIM13-203ENST00000378183 RPL37AP61513 92 aaKnown RBP12.89□□□□□ -0.35
TRIM13-203ENST00000378183 COX7B2Q8TF08 81 aa12.89□□□□□ -0.35
TRIM13-203ENST00000378183 CHTOPQ9Y3Y2 248 aaKnown RBP12.89□□□□□ -0.35
TRIM13-203ENST00000378183 H3BRM9 83 aa12.88□□□□□ -0.35
TRIM13-203ENST00000378183 HIST1H2BKO60814 126 aa12.88□□□□□ -0.35
TRIM13-203ENST00000378183 HIST1H2BJP06899 126 aa12.88□□□□□ -0.35
TRIM13-203ENST00000378183 HIST1H2BOP23527 126 aa12.88□□□□□ -0.35
TRIM13-203ENST00000378183 HIST1H2BBP33778 126 aa12.88□□□□□ -0.35
TRIM13-203ENST00000378183 HIST1H2BDP58876 126 aa12.88□□□□□ -0.35
TRIM13-203ENST00000378183 HIST1H2BCP62807 126 aa12.88□□□□□ -0.35
TRIM13-203ENST00000378183 HIST2H2BEQ16778 126 aa12.88□□□□□ -0.35
TRIM13-203ENST00000378183 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.88□□□□□ -0.35
TRIM13-203ENST00000378183 HIST1H2BHQ93079 126 aa12.88□□□□□ -0.35
TRIM13-203ENST00000378183 HIST1H2BNQ99877 126 aa12.88□□□□□ -0.35
TRIM13-203ENST00000378183 HIST1H2BMQ99879 126 aa12.88□□□□□ -0.35
TRIM13-203ENST00000378183 PKHD1L1Q86WI1 4243 aa12.86□□□□□ -0.35
TRIM13-203ENST00000378183 IGLV5-39A0A0G2JS06 123 aa12.86□□□□□ -0.35
TRIM13-203ENST00000378183 F8VRH5 84 aa12.86□□□□□ -0.35
TRIM13-203ENST00000378183 LEPROTL1O95214 131 aa12.86□□□□□ -0.35
TRIM13-203ENST00000378183 NDUFC2-KCTD14E9PQ53 114 aa12.85□□□□□ -0.35
TRIM13-203ENST00000378183 CXCL5P42830 114 aa12.85□□□□□ -0.35
TRIM13-203ENST00000378183 GAGE2EQ4V326 116 aa12.85□□□□□ -0.35
TRIM13-203ENST00000378183 GAGE2DQ9UEU5 116 aa12.85□□□□□ -0.35
TRIM13-203ENST00000378183 ATP6V1G1O75348 118 aa12.83□□□□□ -0.36
TRIM13-203ENST00000378183 TMEM170BQ5T4T1 132 aa12.83□□□□□ -0.36
TRIM13-203ENST00000378183 FAM168BA1KXE4 195 aa12.82□□□□□ -0.36
TRIM13-203ENST00000378183 FABP4P15090 132 aa12.82□□□□□ -0.36
TRIM13-203ENST00000378183 S100A1P23297 94 aa12.82□□□□□ -0.36
TRIM13-203ENST00000378183 C7orf33Q8WU49 177 aa12.82□□□□□ -0.36
TRIM13-203ENST00000378183 FLG2Q5D862 2391 aaPredicted RBP12.82□□□□□ -0.36
TRIM13-203ENST00000378183 HNRNPA3P51991 378 aaKnown RBP12.81□□□□□ -0.36
TRIM13-203ENST00000378183 ODF1Q14990 250 aa12.81□□□□□ -0.36
TRIM13-203ENST00000378183 C9orf129Q5T035 196 aaKnown RBP12.81□□□□□ -0.36
TRIM13-203ENST00000378183 KRTAP7-1Q8IUC3 87 aa12.81□□□□□ -0.36
TRIM13-203ENST00000378183 MYCBP2O75592 4640 aa12.8□□□□□ -0.36
TRIM13-203ENST00000378183 HSPB8Q9UJY1 196 aa12.8□□□□□ -0.36
TRIM13-203ENST00000378183 TMEM223A0PJW6 202 aa12.79□□□□□ -0.36
TRIM13-203ENST00000378183 H0Y8G0 127 aa12.79□□□□□ -0.36
TRIM13-203ENST00000378183 PHF5AQ7RTV0 110 aaKnown RBP12.77□□□□□ -0.37
TRIM13-203ENST00000378183 FAM19A5Q7Z5A7 132 aaPredicted RBP12.76□□□□□ -0.37
TRIM13-203ENST00000378183 PRR3P79522 188 aaKnown RBP12.75□□□□□ -0.37
TRIM13-203ENST00000378183 XAGE1AQ9HD64 81 aa12.75□□□□□ -0.37
TRIM13-203ENST00000378183 COA6Q5JTJ3 125 aaKnown RBP12.74□□□□□ -0.37
TRIM13-203ENST00000378183 PMCHL2Q9BQD1 86 aa12.73□□□□□ -0.37
TRIM13-203ENST00000378183 ZNF625Q96I27 306 aaPredicted RBP12.72□□□□□ -0.37
TRIM13-203ENST00000378183 LRP1Q07954 4544 aaKnown RBP12.72□□□□□ -0.37
TRIM13-203ENST00000378183 FAT3Q8TDW7 4589 aa12.71□□□□□ -0.37
TRIM13-203ENST00000378183 SERTAD4-AS1Q5TG53 156 aa12.71□□□□□ -0.37
TRIM13-203ENST00000378183 KRTAP11-1Q8IUC1 163 aa12.71□□□□□ -0.37
TRIM13-203ENST00000378183 MAP1LC3CQ9BXW4 147 aa12.71□□□□□ -0.37
TRIM13-203ENST00000378183 M0QXV9 152 aa12.69□□□□□ -0.38
TRIM13-203ENST00000378183 DPM2O94777 84 aa12.69□□□□□ -0.38
TRIM13-203ENST00000378183 PLNP26678 52 aa12.69□□□□□ -0.38
TRIM13-203ENST00000378183 ERG28Q9UKR5 140 aa12.69□□□□□ -0.38
TRIM13-203ENST00000378183 PFN2P35080 140 aa12.68□□□□□ -0.38
TRIM13-203ENST00000378183 PSORS1C2Q9UIG4 136 aa12.68□□□□□ -0.38
TRIM13-203ENST00000378183 SYS1-DBNDD2H3BUS1 97 aa12.67□□□□□ -0.38
TRIM13-203ENST00000378183 IGKCP01834 107 aa12.67□□□□□ -0.38
TRIM13-203ENST00000378183 SFTA2Q6UW10 78 aa12.66□□□□□ -0.38
TRIM13-203ENST00000378183 COX17Q14061 63 aa12.65□□□□□ -0.38
TRIM13-203ENST00000378183 C22orf24Q9Y442 160 aa12.65□□□□□ -0.38
TRIM13-203ENST00000378183 KRTAP29-1A8MX34 341 aaPredicted RBP12.64□□□□□ -0.39
TRIM13-203ENST00000378183 TSPEAR-AS2P59090 65 aa12.64□□□□□ -0.39
TRIM13-203ENST00000378183 PLA2G2DQ9UNK4 145 aa12.64□□□□□ -0.39
TRIM13-203ENST00000378183 LEPROTO15243 131 aa12.63□□□□□ -0.39
TRIM13-203ENST00000378183 SRSF9Q13242 221 aaKnown RBP eCLIP12.63□□□□□ -0.39
TRIM13-203ENST00000378183 SND1-IT1Q9HBX3 110 aa12.63□□□□□ -0.39
TRIM13-203ENST00000378183 C3orf79P0CE67 100 aa12.61□□□□□ -0.39
TRIM13-203ENST00000378183 C1orf137Q5JT78 98 aa12.61□□□□□ -0.39
TRIM13-203ENST00000378183 LINC01545Q5VT33 79 aa12.61□□□□□ -0.39
TRIM13-203ENST00000378183 PET117Q6UWS5 81 aa12.61□□□□□ -0.39
TRIM13-203ENST00000378183 NDUFA12Q9UI09 145 aa12.61□□□□□ -0.39
TRIM13-203ENST00000378183 UBE2BP63146 152 aa12.6□□□□□ -0.39
TRIM13-203ENST00000378183 PLEKHB2Q96CS7 222 aa12.6□□□□□ -0.39
TRIM13-203ENST00000378183 TP73-AS1Q9UF72 201 aa12.6□□□□□ -0.39
TRIM13-203ENST00000378183 IGLV5-37A0A075B6J1 123 aa12.59□□□□□ -0.39
TRIM13-203ENST00000378183 OXTP01178 125 aa12.59□□□□□ -0.39
TRIM13-203ENST00000378183 A0A0U1RRA0 63 aa12.58□□□□□ -0.4
TRIM13-203ENST00000378183 J3QQQ9 107 aa12.58□□□□□ -0.4
TRIM13-203ENST00000378183 LINC00158P58513 81 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms