RNA–Protein interactions for RNA: ENST00000377036.2

DFFA-201, Transcript of DNA fragmentation factor subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene DFFA, Length 1,403 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DFFA-201ENST00000377036 HERV-K104P63124 156 aa11.22□□□□□ -0.61
DFFA-201ENST00000377036 C9orf163Q8N9P6 203 aa11.22□□□□□ -0.61
DFFA-201ENST00000377036 DNAH17Q9UFH2 4485 aa11.22□□□□□ -0.61
DFFA-201ENST00000377036 FRAS1Q86XX4 4008 aa11.21□□□□□ -0.61
DFFA-201ENST00000377036 MYMXA0A1B0GTQ4 84 aa11.21□□□□□ -0.61
DFFA-201ENST00000377036 LCE2DQ5TA82 110 aaPredicted RBP11.21□□□□□ -0.61
DFFA-201ENST00000377036 NDUFA12Q9UI09 145 aa11.21□□□□□ -0.61
DFFA-201ENST00000377036 DNAH10Q8IVF4 4471 aa11.21□□□□□ -0.62
DFFA-201ENST00000377036 LINC00587B1AMM8 73 aa11.2□□□□□ -0.62
DFFA-201ENST00000377036 SLPIP03973 132 aa11.2□□□□□ -0.62
DFFA-201ENST00000377036 C2orf82Q6UX34 121 aa11.2□□□□□ -0.62
DFFA-201ENST00000377036 Q6ZRU5 148 aa11.2□□□□□ -0.62
DFFA-201ENST00000377036 UNQ6190/PRO20217Q6UXQ8 127 aa11.19□□□□□ -0.62
DFFA-201ENST00000377036 ZNF625Q96I27 306 aaPredicted RBP11.19□□□□□ -0.62
DFFA-201ENST00000377036 KRTAP10-2P60368 255 aa11.18□□□□□ -0.62
DFFA-201ENST00000377036 PYY3Q5JQD4 70 aa11.18□□□□□ -0.62
DFFA-201ENST00000377036 VAMP8Q9BV40 100 aa11.18□□□□□ -0.62
DFFA-201ENST00000377036 GCSHP23434 173 aa11.17□□□□□ -0.62
DFFA-201ENST00000377036 COX17Q14061 63 aa11.17□□□□□ -0.62
DFFA-201ENST00000377036 C10orf25Q5T742 122 aa11.17□□□□□ -0.62
DFFA-201ENST00000377036 C6orf48Q9UBA6 75 aa11.17□□□□□ -0.62
DFFA-201ENST00000377036 LOC107984640A0A0U1RRK4 108 aa11.16□□□□□ -0.62
DFFA-201ENST00000377036 TLX1NBP0CAT3 122 aa11.16□□□□□ -0.62
DFFA-201ENST00000377036 TSPEAR-AS2P59090 65 aa11.16□□□□□ -0.62
DFFA-201ENST00000377036 ANKRD39Q53RE8 183 aa11.16□□□□□ -0.62
DFFA-201ENST00000377036 RYR3Q15413 4870 aa11.15□□□□□ -0.62
DFFA-201ENST00000377036 FAT2Q9NYQ8 4349 aa11.15□□□□□ -0.62
DFFA-201ENST00000377036 LINC00474Q9P2X8 69 aa11.15□□□□□ -0.62
DFFA-201ENST00000377036 IGKV2D-26A0A0A0MRZ7 120 aa11.14□□□□□ -0.63
DFFA-201ENST00000377036 C16orf90A8MZG2 172 aa11.14□□□□□ -0.63
DFFA-201ENST00000377036 NDUFC2-KCTD14E9PQ53 114 aa11.14□□□□□ -0.63
DFFA-201ENST00000377036 S100A12P80511 92 aa11.14□□□□□ -0.63
DFFA-201ENST00000377036 ZNF815PA8K554 130 aa11.13□□□□□ -0.63
DFFA-201ENST00000377036 SMIM6P0DI80 62 aa11.13□□□□□ -0.63
DFFA-201ENST00000377036 CIRBPQ14011 172 aaKnown RBP11.13□□□□□ -0.63
DFFA-201ENST00000377036 MAJINQ3KP22 176 aa11.13□□□□□ -0.63
DFFA-201ENST00000377036 ERG28Q9UKR5 140 aa11.13□□□□□ -0.63
DFFA-201ENST00000377036 LOC105371267A0A1B0GV96 52 aa11.12□□□□□ -0.63
DFFA-201ENST00000377036 SDIM1Q6ZPB5 146 aa11.12□□□□□ -0.63
DFFA-201ENST00000377036 MEIG1Q5JSS6 88 aa11.11□□□□□ -0.63
DFFA-201ENST00000377036 PAM16Q9Y3D7 125 aa11.11□□□□□ -0.63
DFFA-201ENST00000377036 SPATA45Q537H7 98 aa11.1□□□□□ -0.63
DFFA-201ENST00000377036 RPL18AQ02543 176 aaKnown RBP11.09□□□□□ -0.63
DFFA-201ENST00000377036 C9orf116Q5BN46 136 aaPredicted RBP11.09□□□□□ -0.63
DFFA-201ENST00000377036 TIMM17BO60830 172 aa11.09□□□□□ -0.63
DFFA-201ENST00000377036 FUSP35637 526 aaKnown RBP eCLIP11.09□□□□□ -0.63
DFFA-201ENST00000377036 SCGB1D4Q6XE38 83 aa11.09□□□□□ -0.63
DFFA-201ENST00000377036 A0A0J9YXY3 114 aa11.08□□□□□ -0.64
DFFA-201ENST00000377036 DLEU1O43261 78 aa11.08□□□□□ -0.64
DFFA-201ENST00000377036 COX8AP10176 69 aa11.08□□□□□ -0.64
DFFA-201ENST00000377036 PFN2P35080 140 aa11.08□□□□□ -0.64
DFFA-201ENST00000377036 PTTG1IPP53801 180 aa11.08□□□□□ -0.64
DFFA-201ENST00000377036 LINC00158P58513 81 aa11.08□□□□□ -0.64
DFFA-201ENST00000377036 PCP2Q8IVA1 136 aa11.08□□□□□ -0.64
DFFA-201ENST00000377036 LINC01620Q4KN68 170 aa11.07□□□□□ -0.64
DFFA-201ENST00000377036 GAGE2BQ13066 116 aa11.06□□□□□ -0.64
DFFA-201ENST00000377036 Q6ZRP5 223 aa11.06□□□□□ -0.64
DFFA-201ENST00000377036 TMEM238C9JI98 176 aa11.05□□□□□ -0.64
DFFA-201ENST00000377036 SMIM13P0DJ93 91 aa11.05□□□□□ -0.64
DFFA-201ENST00000377036 KRTAP10-1P60331 282 aa11.05□□□□□ -0.64
DFFA-201ENST00000377036 BOD1L2Q8IYS8 172 aa11.05□□□□□ -0.64
DFFA-201ENST00000377036 A0A096LNI7 61 aa11.04□□□□□ -0.64
DFFA-201ENST00000377036 GAGE2EQ4V326 116 aa11.04□□□□□ -0.64
DFFA-201ENST00000377036 TTTY13Q9BZ97 58 aa11.04□□□□□ -0.64
DFFA-201ENST00000377036 GAGE2DQ9UEU5 116 aa11.04□□□□□ -0.64
DFFA-201ENST00000377036 PKD1P98161 4303 aa11.04□□□□□ -0.64
DFFA-201ENST00000377036 HECTD4Q9Y4D8 3996 aa11.03□□□□□ -0.64
DFFA-201ENST00000377036 IGKV2-24A0A0C4DH68 120 aa11.03□□□□□ -0.64
DFFA-201ENST00000377036 SLC25A34Q6PIV7 304 aa11.03□□□□□ -0.64
DFFA-201ENST00000377036 Q6ZSA8 131 aa11.03□□□□□ -0.64
DFFA-201ENST00000377036 COPS9Q8WXC6 57 aa11.03□□□□□ -0.64
DFFA-201ENST00000377036 DPH3Q96FX2 82 aa11.03□□□□□ -0.64
DFFA-201ENST00000377036 Q6ZVH6 145 aa11.02□□□□□ -0.64
DFFA-201ENST00000377036 SPACA4Q8TDM5 124 aa11.02□□□□□ -0.64
DFFA-201ENST00000377036 DNAH11Q96DT5 4516 aa11.02□□□□□ -0.64
DFFA-201ENST00000377036 MIR7-3HGQ8N6C7 128 aa11.01□□□□□ -0.65
DFFA-201ENST00000377036 SND1-IT1Q9HBX3 110 aa11.01□□□□□ -0.65
DFFA-201ENST00000377036 C14orf144Q96I85 54 aa11.01□□□□□ -0.65
DFFA-201ENST00000377036 MIEN1Q9BRT3 115 aa11.01□□□□□ -0.65
DFFA-201ENST00000377036 A0A0U1RRA0 63 aa11□□□□□ -0.65
DFFA-201ENST00000377036 XAGE1AQ9HD64 81 aa10.99□□□□□ -0.65
DFFA-201ENST00000377036 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.99□□□□□ -0.65
DFFA-201ENST00000377036 LOC107984156A0A0G2JMH3 177 aa10.98□□□□□ -0.65
DFFA-201ENST00000377036 CHTF8P0CG12 524 aa10.98□□□□□ -0.65
DFFA-201ENST00000377036 IFITM1P13164 125 aa10.98□□□□□ -0.65
DFFA-201ENST00000377036 ARL17AQ8IVW1 177 aa10.98□□□□□ -0.65
DFFA-201ENST00000377036 LITAFQ99732 161 aa10.98□□□□□ -0.65
DFFA-201ENST00000377036 SPANXDQ9BXN6 97 aa10.98□□□□□ -0.65
DFFA-201ENST00000377036 PPDPFQ9H3Y8 114 aa10.98□□□□□ -0.65
DFFA-201ENST00000377036 SPANXCQ9NY87 97 aa10.98□□□□□ -0.65
DFFA-201ENST00000377036 PLA2G2DQ9UNK4 145 aa10.98□□□□□ -0.65
DFFA-201ENST00000377036 RPL24P83731 157 aaKnown RBP10.97□□□□□ -0.65
DFFA-201ENST00000377036 C9orf129Q5T035 196 aaKnown RBP10.97□□□□□ -0.65
DFFA-201ENST00000377036 C12orf57Q99622 126 aa10.97□□□□□ -0.65
DFFA-201ENST00000377036 SPANXB1Q9NS25 103 aaPredicted RBP10.97□□□□□ -0.65
DFFA-201ENST00000377036 HIGD1BQ9P298 99 aa10.97□□□□□ -0.65
DFFA-201ENST00000377036 UQCR10Q9UDW1 63 aa10.97□□□□□ -0.65
DFFA-201ENST00000377036 ADAMTSL4-AS1Q5T5F5 129 aa10.96□□□□□ -0.65
DFFA-201ENST00000377036 PLAC8Q9NZF1 115 aa10.96□□□□□ -0.65
DFFA-201ENST00000377036 SRSF9Q13242 221 aaKnown RBP eCLIP10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 123.8 ms